RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-208ENST00000498223 HMGB2P26583 209 aaKnown RBP14.78□□□□□ -0.04
CTTN-208ENST00000498223 DUSP27Q5VZP5 1158 aa14.78□□□□□ -0.04
CTTN-208ENST00000498223 VSIG10Q8N0Z9 540 aa14.78□□□□□ -0.04
CTTN-208ENST00000498223 CASZ1Q86V15 1759 aa14.78□□□□□ -0.04
CTTN-208ENST00000498223 GIGYF1O75420 1035 aaPredicted RBP14.77□□□□□ -0.05
CTTN-208ENST00000498223 STARD3NLO95772 234 aa14.77□□□□□ -0.05
CTTN-208ENST00000498223 C8orf58Q8NAV2 365 aa14.77□□□□□ -0.05
CTTN-208ENST00000498223 NECTIN2Q92692 538 aa14.77□□□□□ -0.05
CTTN-208ENST00000498223 C4BP0C0L5 1744 aa14.77□□□□□ -0.05
CTTN-208ENST00000498223 PRAMEF22A3QJZ6 481 aa14.76□□□□□ -0.05
CTTN-208ENST00000498223 PTGER2P43116 358 aa14.76□□□□□ -0.05
CTTN-208ENST00000498223 ITPK1Q13572 414 aa14.76□□□□□ -0.05
CTTN-208ENST00000498223 TWISTNBQ3B726 338 aaPredicted RBP14.76□□□□□ -0.05
CTTN-208ENST00000498223 SLC4A9Q96Q91 983 aa14.76□□□□□ -0.05
CTTN-208ENST00000498223 LRRC4BQ9NT99 713 aa14.76□□□□□ -0.05
CTTN-208ENST00000498223 USP16Q9Y5T5 823 aa14.76□□□□□ -0.05
CTTN-208ENST00000498223 CICQ96RK0 1608 aaPredicted RBP14.76□□□□□ -0.05
CTTN-208ENST00000498223 TSPYL6Q8N831 410 aa14.75□□□□□ -0.05
CTTN-208ENST00000498223 LINC00116Q8NCU8 138 aa14.75□□□□□ -0.05
CTTN-208ENST00000498223 AK7Q96M32 723 aa14.75□□□□□ -0.05
CTTN-208ENST00000498223 MTFR1LQ9H019 292 aa14.75□□□□□ -0.05
CTTN-208ENST00000498223 TUBGCP6Q96RT7 1819 aa14.74□□□□□ -0.05
CTTN-208ENST00000498223 HDGFL1Q5TGJ6 251 aa14.74□□□□□ -0.05
CTTN-208ENST00000498223 NPM2Q86SE8 214 aaKnown RBP14.74□□□□□ -0.05
CTTN-208ENST00000498223 CHMP4AQ9BY43 222 aa14.74□□□□□ -0.05
CTTN-208ENST00000498223 ZNF330Q9Y3S2 320 aaPredicted RBP14.74□□□□□ -0.05
CTTN-208ENST00000498223 UBR3Q6ZT12 1888 aa14.74□□□□□ -0.05
CTTN-208ENST00000498223 HOXB7P09629 217 aa14.73□□□□□ -0.05
CTTN-208ENST00000498223 CYP19A1P11511 503 aaPredicted RBP14.73□□□□□ -0.05
CTTN-208ENST00000498223 CANXP27824 592 aaKnown RBP14.73□□□□□ -0.05
CTTN-208ENST00000498223 CRKLP46109 303 aaKnown RBP14.73□□□□□ -0.05
CTTN-208ENST00000498223 ZNF827Q17R98 1081 aa14.73□□□□□ -0.05
CTTN-208ENST00000498223 TRMT2AQ8IZ69 625 aaKnown RBP14.73□□□□□ -0.05
CTTN-208ENST00000498223 CCDC87Q9NVE4 849 aa14.73□□□□□ -0.05
CTTN-208ENST00000498223 ATF5Q9Y2D1 282 aaPredicted RBP14.73□□□□□ -0.05
CTTN-208ENST00000498223 SOS1Q07889 1333 aaPredicted RBP14.72□□□□□ -0.05
CTTN-208ENST00000498223 DCAF8L1A6NGE4 600 aa14.72□□□□□ -0.05
CTTN-208ENST00000498223 A1BGP04217 495 aa14.72□□□□□ -0.05
CTTN-208ENST00000498223 CCDC30Q5VVM6 783 aa14.72□□□□□ -0.05
CTTN-208ENST00000498223 AKT1S1Q96B36 256 aa14.72□□□□□ -0.05
CTTN-208ENST00000498223 ARXQ96QS3 562 aa14.72□□□□□ -0.05
CTTN-208ENST00000498223 STK31Q9BXU1 1019 aa14.72□□□□□ -0.05
CTTN-208ENST00000498223 TCERG1O14776 1098 aaKnown RBP14.71□□□□□ -0.05
CTTN-208ENST00000498223 GNPATO15228 680 aa14.71□□□□□ -0.05
CTTN-208ENST00000498223 PIP4K2AP48426 406 aaPredicted RBP14.71□□□□□ -0.05
CTTN-208ENST00000498223 SGIP1Q9BQI5 828 aa14.71□□□□□ -0.05
CTTN-208ENST00000498223 TFCP2L1Q9NZI6 479 aa14.71□□□□□ -0.05
CTTN-208ENST00000498223 CNTNAP4Q9C0A0 1308 aa14.7□□□□□ -0.06
CTTN-208ENST00000498223 MSH5O43196 834 aa14.7□□□□□ -0.06
CTTN-208ENST00000498223 VAMP4O75379 141 aa14.7□□□□□ -0.06
CTTN-208ENST00000498223 MYL6BP14649 208 aa14.7□□□□□ -0.06
CTTN-208ENST00000498223 RC3H1Q5TC82 1133 aaKnown RBP14.7□□□□□ -0.06
CTTN-208ENST00000498223 ZBTB1Q9Y2K1 713 aa14.7□□□□□ -0.06
CTTN-208ENST00000498223 RTCBQ9Y3I0 505 aaKnown RBP14.7□□□□□ -0.06
CTTN-208ENST00000498223 PHF14O94880 888 aa14.69□□□□□ -0.06
CTTN-208ENST00000498223 CHPF2Q9P2E5 772 aa14.69□□□□□ -0.06
CTTN-208ENST00000498223 RPS6KA4O75676 772 aa14.68□□□□□ -0.06
CTTN-208ENST00000498223 ANXA1P04083 346 aa14.68□□□□□ -0.06
CTTN-208ENST00000498223 CT47B1P0C2W7 299 aaPredicted RBP14.68□□□□□ -0.06
CTTN-208ENST00000498223 INTS5Q6P9B9 1019 aaKnown RBP14.68□□□□□ -0.06
CTTN-208ENST00000498223 SLC16A10Q8TF71 515 aa14.68□□□□□ -0.06
CTTN-208ENST00000498223 DBF4Q9UBU7 674 aaPredicted RBP14.68□□□□□ -0.06
CTTN-208ENST00000498223 QSER1Q2KHR3 1735 aa14.68□□□□□ -0.06
CTTN-208ENST00000498223 ERBB4Q15303 1308 aa14.67□□□□□ -0.06
CTTN-208ENST00000498223 YY1P25490 414 aa14.67□□□□□ -0.06
CTTN-208ENST00000498223 SYT17Q9BSW7 474 aa14.67□□□□□ -0.06
CTTN-208ENST00000498223 FHDC1Q9C0D6 1143 aaPredicted RBP14.67□□□□□ -0.06
CTTN-208ENST00000498223 DDX21Q9NR30 783 aaKnown RBP eCLIP14.67□□□□□ -0.06
CTTN-208ENST00000498223 PNPLA7Q6ZV29 1317 aa14.66□□□□□ -0.06
CTTN-208ENST00000498223 C4AP0C0L4 1744 aa14.66□□□□□ -0.06
CTTN-208ENST00000498223 NUP98P52948 1817 aa14.66□□□□□ -0.06
CTTN-208ENST00000498223 SLC4A2P04920 1241 aa14.66□□□□□ -0.06
CTTN-208ENST00000498223 AIMP1Q12904 312 aaKnown RBP14.66□□□□□ -0.06
CTTN-208ENST00000498223 TRAPPC3LQ5T215 181 aa14.66□□□□□ -0.06
CTTN-208ENST00000498223 SMIM5Q71RC9 77 aa14.66□□□□□ -0.06
CTTN-208ENST00000498223 ZNF428Q96B54 188 aa14.66□□□□□ -0.06
CTTN-208ENST00000498223 BCL2L13Q9BXK5 485 aa14.66□□□□□ -0.06
CTTN-208ENST00000498223 SMC4Q9NTJ3 1288 aa14.66□□□□□ -0.06
CTTN-208ENST00000498223 HYPKQ9NX55 129 aa14.66□□□□□ -0.06
CTTN-208ENST00000498223 A0A087WZG4 1122 aa14.65□□□□□ -0.06
CTTN-208ENST00000498223 NBPF26B4DH59 902 aa14.65□□□□□ -0.06
CTTN-208ENST00000498223 RFC4P35249 363 aa14.65□□□□□ -0.06
CTTN-208ENST00000498223 IL6STP40189 918 aaPredicted RBP14.65□□□□□ -0.06
CTTN-208ENST00000498223 PROSER3Q2NL68 480 aa14.65□□□□□ -0.06
CTTN-208ENST00000498223 NBPF10Q6P3W6 841 aaKnown RBP14.65□□□□□ -0.06
CTTN-208ENST00000498223 NBPF15Q8N660 670 aa14.65□□□□□ -0.06
CTTN-208ENST00000498223 COL15A1P39059 1388 aa14.64□□□□□ -0.07
CTTN-208ENST00000498223 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.64□□□□□ -0.07
CTTN-208ENST00000498223 SSFA2P28290 1259 aa14.64□□□□□ -0.07
CTTN-208ENST00000498223 KIF6Q6ZMV9 814 aa14.64□□□□□ -0.07
CTTN-208ENST00000498223 FLAD1Q8NFF5 587 aa14.64□□□□□ -0.07
CTTN-208ENST00000498223 ZPR1O75312 459 aa14.63□□□□□ -0.07
CTTN-208ENST00000498223 POLD1P28340 1107 aa14.63□□□□□ -0.07
CTTN-208ENST00000498223 EIF5P55010 431 aaKnown RBP14.63□□□□□ -0.07
CTTN-208ENST00000498223 ALDH1L2Q3SY69 923 aa14.63□□□□□ -0.07
CTTN-208ENST00000498223 COPS6Q7L5N1 327 aa14.63□□□□□ -0.07
CTTN-208ENST00000498223 DZIP3Q86Y13 1208 aaKnown RBP14.63□□□□□ -0.07
CTTN-208ENST00000498223 XAGE3Q8WTP9 111 aa14.63□□□□□ -0.07
CTTN-208ENST00000498223 SSH1Q8WYL5 1049 aa14.63□□□□□ -0.07
CTTN-208ENST00000498223 ARHGEF1Q92888 912 aaKnown RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 170.5 ms