RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 IGFBP4P22692 258 aa9.22□□□□□ -0.93
SSR3-209ENST00000498205 HIRAP54198 1017 aaPredicted RBP9.22□□□□□ -0.93
SSR3-209ENST00000498205 PDE4CQ08493 712 aa9.22□□□□□ -0.93
SSR3-209ENST00000498205 PGBD3Q8N328 593 aa9.22□□□□□ -0.93
SSR3-209ENST00000498205 ZNF775Q96BV0 537 aaPredicted RBP9.22□□□□□ -0.93
SSR3-209ENST00000498205 SERTM1A2A2V5 107 aa9.21□□□□□ -0.94
SSR3-209ENST00000498205 VSIG8P0DPA2 414 aa9.21□□□□□ -0.94
SSR3-209ENST00000498205 TATP17735 454 aaPredicted RBP9.21□□□□□ -0.94
SSR3-209ENST00000498205 NOS2P35228 1153 aa9.21□□□□□ -0.94
SSR3-209ENST00000498205 PHKA2P46019 1235 aa9.21□□□□□ -0.94
SSR3-209ENST00000498205 PLA2G4AP47712 749 aa9.21□□□□□ -0.94
SSR3-209ENST00000498205 ZNF295-AS1Q8N0V1 137 aa9.21□□□□□ -0.94
SSR3-209ENST00000498205 TSPAN10Q9H1Z9 355 aaPredicted RBP9.21□□□□□ -0.94
SSR3-209ENST00000498205 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.21□□□□□ -0.94
SSR3-209ENST00000498205 ZMIZ1Q9ULJ6 1067 aa9.21□□□□□ -0.94
SSR3-209ENST00000498205 ATAD2Q6PL18 1390 aa9.21□□□□□ -0.94
SSR3-209ENST00000498205 FOXO3O43524 673 aa9.2□□□□□ -0.94
SSR3-209ENST00000498205 FOXR1Q6PIV2 292 aa9.2□□□□□ -0.94
SSR3-209ENST00000498205 POTEAQ6S8J7 498 aa9.2□□□□□ -0.94
SSR3-209ENST00000498205 TRIM22Q8IYM9 498 aa9.2□□□□□ -0.94
SSR3-209ENST00000498205 GAS2L1Q99501 681 aaPredicted RBP9.2□□□□□ -0.94
SSR3-209ENST00000498205 WFS1O76024 890 aa9.19□□□□□ -0.94
SSR3-209ENST00000498205 NFX1Q12986 1120 aaKnown RBP9.19□□□□□ -0.94
SSR3-209ENST00000498205 EFHC2Q5JST6 749 aa9.19□□□□□ -0.94
SSR3-209ENST00000498205 L3MBTL2Q969R5 705 aa9.19□□□□□ -0.94
SSR3-209ENST00000498205 AIDAQ96BJ3 306 aa9.19□□□□□ -0.94
SSR3-209ENST00000498205 ARID3AQ99856 593 aa9.19□□□□□ -0.94
SSR3-209ENST00000498205 CRISPLD1Q9H336 500 aa9.19□□□□□ -0.94
SSR3-209ENST00000498205 ZNF232Q9UNY5 417 aa9.19□□□□□ -0.94
SSR3-209ENST00000498205 PPP1R12BO60237 982 aaPredicted RBP9.18□□□□□ -0.94
SSR3-209ENST00000498205 HIF1AQ16665 826 aa9.18□□□□□ -0.94
SSR3-209ENST00000498205 C1orf53Q5VUE5 145 aa9.18□□□□□ -0.94
SSR3-209ENST00000498205 TREML4Q6UXN2 200 aa9.18□□□□□ -0.94
SSR3-209ENST00000498205 RIPOR1Q6ZS17 1223 aa9.18□□□□□ -0.94
SSR3-209ENST00000498205 SV2AQ7L0J3 742 aa9.18□□□□□ -0.94
SSR3-209ENST00000498205 SCG3Q8WXD2 468 aaKnown RBP9.18□□□□□ -0.94
SSR3-209ENST00000498205 MSX1P28360 303 aa9.17□□□□□ -0.94
SSR3-209ENST00000498205 WEE1P30291 646 aa9.17□□□□□ -0.94
SSR3-209ENST00000498205 NLRP8Q86W28 1048 aa9.17□□□□□ -0.94
SSR3-209ENST00000498205 CLP1Q92989 425 aaKnown RBP9.17□□□□□ -0.94
SSR3-209ENST00000498205 USTQ9Y2C2 406 aa9.17□□□□□ -0.94
SSR3-209ENST00000498205 TMEM164Q5U3C3 297 aa9.16□□□□□ -0.94
SSR3-209ENST00000498205 FIGNL1Q6PIW4 674 aa9.16□□□□□ -0.94
SSR3-209ENST00000498205 STK32AQ8WU08 396 aa9.16□□□□□ -0.94
SSR3-209ENST00000498205 C2orf49Q9BVC5 232 aaPredicted RBP9.16□□□□□ -0.94
SSR3-209ENST00000498205 NUCKS1Q9H1E3 243 aaKnown RBP9.16□□□□□ -0.94
SSR3-209ENST00000498205 USP3Q9Y6I4 520 aa9.16□□□□□ -0.94
SSR3-209ENST00000498205 EML1O00423 815 aa9.15□□□□□ -0.94
SSR3-209ENST00000498205 C21orf2O43822 256 aa9.15□□□□□ -0.94
SSR3-209ENST00000498205 ZDHHC1Q8WTX9 485 aa9.15□□□□□ -0.94
SSR3-209ENST00000498205 VTI1AQ96AJ9 217 aa9.15□□□□□ -0.94
SSR3-209ENST00000498205 CDC14CA4D256 554 aa9.14□□□□□ -0.95
SSR3-209ENST00000498205 ATP4AP20648 1035 aa9.14□□□□□ -0.95
SSR3-209ENST00000498205 FAM69CQ0P6D2 419 aa9.14□□□□□ -0.95
SSR3-209ENST00000498205 TBCELQ5QJ74 424 aa9.14□□□□□ -0.95
SSR3-209ENST00000498205 TRERF1Q96PN7 1200 aa9.14□□□□□ -0.95
SSR3-209ENST00000498205 GPAMQ9HCL2 828 aa9.14□□□□□ -0.95
SSR3-209ENST00000498205 ANKIB1Q9P2G1 1089 aa9.14□□□□□ -0.95
SSR3-209ENST00000498205 PHF24Q9UPV7 400 aa9.14□□□□□ -0.95
SSR3-209ENST00000498205 ARSJQ5FYB0 599 aaPredicted RBP9.13□□□□□ -0.95
SSR3-209ENST00000498205 BICDL1Q6ZP65 573 aa9.13□□□□□ -0.95
SSR3-209ENST00000498205 CHMP7Q8WUX9 453 aaPredicted RBP9.13□□□□□ -0.95
SSR3-209ENST00000498205 COL26A1Q96A83 441 aa9.13□□□□□ -0.95
SSR3-209ENST00000498205 ZNF837Q96EG3 531 aaPredicted RBP9.13□□□□□ -0.95
SSR3-209ENST00000498205 NEUROD4Q9HD90 331 aa9.13□□□□□ -0.95
SSR3-209ENST00000498205 VEGFBP49765 207 aa9.12□□□□□ -0.95
SSR3-209ENST00000498205 DBN1Q16643 649 aa9.12□□□□□ -0.95
SSR3-209ENST00000498205 B4GALNT3Q6L9W6 998 aa9.12□□□□□ -0.95
SSR3-209ENST00000498205 GJA3Q9Y6H8 435 aa9.12□□□□□ -0.95
SSR3-209ENST00000498205 PTCD1O75127 700 aaKnown RBP9.11□□□□□ -0.95
SSR3-209ENST00000498205 ALDH16A1Q8IZ83 802 aa9.11□□□□□ -0.95
SSR3-209ENST00000498205 VWA5B2Q8N398 1253 aa9.11□□□□□ -0.95
SSR3-209ENST00000498205 RHPN1Q8TCX5 695 aa9.11□□□□□ -0.95
SSR3-209ENST00000498205 CFHR5Q9BXR6 569 aa9.11□□□□□ -0.95
SSR3-209ENST00000498205 RUBCNLQ9H714 662 aa9.11□□□□□ -0.95
SSR3-209ENST00000498205 PARP3Q9Y6F1 533 aa9.11□□□□□ -0.95
SSR3-209ENST00000498205 A0A1W2PNR3 127 aa9.1□□□□□ -0.95
SSR3-209ENST00000498205 TXLNAP40222 546 aa9.1□□□□□ -0.95
SSR3-209ENST00000498205 RTN1Q16799 776 aa9.1□□□□□ -0.95
SSR3-209ENST00000498205 SAMD5Q5TGI4 173 aa9.1□□□□□ -0.95
SSR3-209ENST00000498205 ZIC5Q96T25 663 aa9.1□□□□□ -0.95
SSR3-209ENST00000498205 PHACTR1Q9C0D0 580 aa9.1□□□□□ -0.95
SSR3-209ENST00000498205 CXXC1Q9P0U4 656 aaPredicted RBP9.1□□□□□ -0.95
SSR3-209ENST00000498205 TMEM88BA6NKF7 163 aa9.09□□□□□ -0.95
SSR3-209ENST00000498205 PRMT3O60678 531 aa9.09□□□□□ -0.95
SSR3-209ENST00000498205 OCLNQ16625 522 aa9.09□□□□□ -0.95
SSR3-209ENST00000498205 LCE2AQ5TA79 106 aaPredicted RBP9.09□□□□□ -0.95
SSR3-209ENST00000498205 CUEDC1Q9NWM3 386 aaPredicted RBP9.09□□□□□ -0.95
SSR3-209ENST00000498205 ATXN7L1Q9ULK2 861 aaPredicted RBP9.09□□□□□ -0.95
SSR3-209ENST00000498205 NSFL1CQ9UNZ2 370 aaKnown RBP9.09□□□□□ -0.95
SSR3-209ENST00000498205 ERBB4Q15303 1308 aa9.08□□□□□ -0.96
SSR3-209ENST00000498205 WIPF1O43516 503 aa9.08□□□□□ -0.96
SSR3-209ENST00000498205 ATP2B4P23634 1241 aa9.08□□□□□ -0.96
SSR3-209ENST00000498205 MYO19Q96H55 970 aa9.08□□□□□ -0.96
SSR3-209ENST00000498205 HCN4Q9Y3Q4 1203 aa9.08□□□□□ -0.96
SSR3-209ENST00000498205 PCDHGC4Q9Y5F7 938 aa9.08□□□□□ -0.96
SSR3-209ENST00000498205 GTPBP3Q969Y2 492 aaKnown RBP9.07□□□□□ -0.96
SSR3-209ENST00000498205 MTMR7Q9Y216 660 aa9.07□□□□□ -0.96
SSR3-209ENST00000498205 FKBP5Q13451 457 aaPredicted RBP9.06□□□□□ -0.96
SSR3-209ENST00000498205 LAMC2Q13753 1193 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms