RNA–Protein interactions for RNA: ENST00000497703.1

GARNL3-221, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 3

Gene GARNL3, Length 304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-221ENST00000497703 GRIP2Q9C0E4 1043 aa12.41□□□□□ -0.42
GARNL3-221ENST00000497703 NOS2P35228 1153 aa12.4□□□□□ -0.42
GARNL3-221ENST00000497703 CTSOP43234 321 aaPredicted RBP12.4□□□□□ -0.42
GARNL3-221ENST00000497703 SERPINB4P48594 390 aa12.4□□□□□ -0.42
GARNL3-221ENST00000497703 EGFL7Q9UHF1 273 aa12.4□□□□□ -0.42
GARNL3-221ENST00000497703 TTLL8A6PVC2 850 aa12.39□□□□□ -0.43
GARNL3-221ENST00000497703 NBPF1Q3BBV0 1214 aa12.39□□□□□ -0.43
GARNL3-221ENST00000497703 SND1Q7KZF4 910 aaKnown RBP eCLIP12.39□□□□□ -0.43
GARNL3-221ENST00000497703 LYSMD3Q7Z3D4 306 aa12.39□□□□□ -0.43
GARNL3-221ENST00000497703 CRIPAKQ8N1N5 446 aa12.39□□□□□ -0.43
GARNL3-221ENST00000497703 GTF3C2Q8WUA4 911 aaPredicted RBP12.39□□□□□ -0.43
GARNL3-221ENST00000497703 L3MBTL2Q969R5 705 aa12.39□□□□□ -0.43
GARNL3-221ENST00000497703 BMP1P13497 986 aa12.38□□□□□ -0.43
GARNL3-221ENST00000497703 SCNN1AP37088 669 aa12.38□□□□□ -0.43
GARNL3-221ENST00000497703 NAA30Q147X3 362 aaPredicted RBP12.38□□□□□ -0.43
GARNL3-221ENST00000497703 PLA2G4AP47712 749 aa12.37□□□□□ -0.43
GARNL3-221ENST00000497703 SF3B2Q13435 895 aaKnown RBP12.37□□□□□ -0.43
GARNL3-221ENST00000497703 C16orf46Q6P387 395 aa12.37□□□□□ -0.43
GARNL3-221ENST00000497703 GLYCTKQ8IVS8 523 aa12.37□□□□□ -0.43
GARNL3-221ENST00000497703 NGLY1Q96IV0 654 aa12.37□□□□□ -0.43
GARNL3-221ENST00000497703 IRX2Q9BZI1 471 aaPredicted RBP12.37□□□□□ -0.43
GARNL3-221ENST00000497703 BIN2Q9UBW5 565 aaPredicted RBP12.37□□□□□ -0.43
GARNL3-221ENST00000497703 SEPT3Q9UH03 358 aa12.37□□□□□ -0.43
GARNL3-221ENST00000497703 USP3Q9Y6I4 520 aa12.37□□□□□ -0.43
GARNL3-221ENST00000497703 HIRAP54198 1017 aaPredicted RBP12.36□□□□□ -0.43
GARNL3-221ENST00000497703 FOXD4L5Q5VV16 416 aaPredicted RBP12.36□□□□□ -0.43
GARNL3-221ENST00000497703 PRICKLE2Q7Z3G6 844 aa12.36□□□□□ -0.43
GARNL3-221ENST00000497703 RNF217Q8TC41 542 aa12.36□□□□□ -0.43
GARNL3-221ENST00000497703 AIDAQ96BJ3 306 aa12.36□□□□□ -0.43
GARNL3-221ENST00000497703 SOWAHDA6NJG2 315 aa12.35□□□□□ -0.43
GARNL3-221ENST00000497703 SPATA31C2B4DYI2 1134 aa12.35□□□□□ -0.43
GARNL3-221ENST00000497703 H3BRB1 525 aa12.35□□□□□ -0.43
GARNL3-221ENST00000497703 EML1O00423 815 aa12.35□□□□□ -0.43
GARNL3-221ENST00000497703 HELQQ8TDG4 1101 aa12.35□□□□□ -0.43
GARNL3-221ENST00000497703 TUT1Q9H6E5 874 aaKnown RBP12.35□□□□□ -0.43
GARNL3-221ENST00000497703 PARP3Q9Y6F1 533 aa12.35□□□□□ -0.43
GARNL3-221ENST00000497703 TATP17735 454 aaPredicted RBP12.34□□□□□ -0.43
GARNL3-221ENST00000497703 CCDC27Q2M243 656 aa12.34□□□□□ -0.43
GARNL3-221ENST00000497703 C4orf17Q53FE4 359 aa12.34□□□□□ -0.43
GARNL3-221ENST00000497703 WDR44Q5JSH3 913 aa12.34□□□□□ -0.43
GARNL3-221ENST00000497703 ZFP42Q96MM3 310 aa12.34□□□□□ -0.43
GARNL3-221ENST00000497703 HCN4Q9Y3Q4 1203 aa12.34□□□□□ -0.43
GARNL3-221ENST00000497703 PHKA2P46019 1235 aa12.33□□□□□ -0.44
GARNL3-221ENST00000497703 FKBP4Q02790 459 aaKnown RBP eCLIP12.33□□□□□ -0.44
GARNL3-221ENST00000497703 POU4F2Q12837 409 aa12.33□□□□□ -0.44
GARNL3-221ENST00000497703 ZNF211Q13398 564 aaPredicted RBP12.33□□□□□ -0.44
GARNL3-221ENST00000497703 CAPN12Q6ZSI9 719 aa12.33□□□□□ -0.44
GARNL3-221ENST00000497703 ALDH16A1Q8IZ83 802 aa12.33□□□□□ -0.44
GARNL3-221ENST00000497703 ZDHHC1Q8WTX9 485 aa12.33□□□□□ -0.44
GARNL3-221ENST00000497703 HIF1AQ16665 826 aa12.32□□□□□ -0.44
GARNL3-221ENST00000497703 C1orf53Q5VUE5 145 aa12.32□□□□□ -0.44
GARNL3-221ENST00000497703 NBPF10Q6P3W6 841 aaKnown RBP12.32□□□□□ -0.44
GARNL3-221ENST00000497703 POTEAQ6S8J7 498 aa12.32□□□□□ -0.44
GARNL3-221ENST00000497703 TRIM46Q7Z4K8 759 aa12.32□□□□□ -0.44
GARNL3-221ENST00000497703 ANO2Q9NQ90 1003 aa12.32□□□□□ -0.44
GARNL3-221ENST00000497703 SOS2Q07890 1332 aaPredicted RBP12.32□□□□□ -0.44
GARNL3-221ENST00000497703 FIGNL2A6NMB9 653 aa12.31□□□□□ -0.44
GARNL3-221ENST00000497703 ICMTO60725 284 aa12.31□□□□□ -0.44
GARNL3-221ENST00000497703 RTN1Q16799 776 aa12.31□□□□□ -0.44
GARNL3-221ENST00000497703 PHACTR1Q9C0D0 580 aa12.31□□□□□ -0.44
GARNL3-221ENST00000497703 DNMT3AQ9Y6K1 912 aaPredicted RBP12.31□□□□□ -0.44
GARNL3-221ENST00000497703 MAN1A2O60476 641 aa12.3□□□□□ -0.44
GARNL3-221ENST00000497703 FAM13AO94988 1023 aa12.3□□□□□ -0.44
GARNL3-221ENST00000497703 MYO19Q96H55 970 aa12.3□□□□□ -0.44
GARNL3-221ENST00000497703 TIMMDC1Q9NPL8 285 aa12.3□□□□□ -0.44
GARNL3-221ENST00000497703 ATP13A2Q9NQ11 1180 aa12.3□□□□□ -0.44
GARNL3-221ENST00000497703 AAASQ9NRG9 546 aa12.3□□□□□ -0.44
GARNL3-221ENST00000497703 ZDHHC3Q9NYG2 299 aa12.3□□□□□ -0.44
GARNL3-221ENST00000497703 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.29□□□□□ -0.44
GARNL3-221ENST00000497703 ZNF295-AS1Q8N0V1 137 aa12.29□□□□□ -0.44
GARNL3-221ENST00000497703 RHPN1Q8TCX5 695 aa12.29□□□□□ -0.44
GARNL3-221ENST00000497703 QTRT2Q9H974 415 aaKnown RBP12.29□□□□□ -0.44
GARNL3-221ENST00000497703 NEUROD4Q9HD90 331 aa12.29□□□□□ -0.44
GARNL3-221ENST00000497703 A0A1B0GTH6 734 aa12.28□□□□□ -0.44
GARNL3-221ENST00000497703 ST8SIA5O15466 376 aa12.28□□□□□ -0.44
GARNL3-221ENST00000497703 BRD2P25440 801 aaKnown RBP12.28□□□□□ -0.44
GARNL3-221ENST00000497703 MFAP1P55081 439 aaKnown RBP12.28□□□□□ -0.44
GARNL3-221ENST00000497703 COX20Q5RI15 118 aa12.28□□□□□ -0.44
GARNL3-221ENST00000497703 SH3PXD2AQ5TCZ1 1133 aa12.28□□□□□ -0.44
GARNL3-221ENST00000497703 BICDL1Q6ZP65 573 aa12.28□□□□□ -0.44
GARNL3-221ENST00000497703 ABTB2Q8N961 1025 aa12.28□□□□□ -0.44
GARNL3-221ENST00000497703 SENP2Q9HC62 589 aa12.28□□□□□ -0.44
GARNL3-221ENST00000497703 STIM2Q9P246 746 aa12.28□□□□□ -0.44
GARNL3-221ENST00000497703 GPC6Q9Y625 555 aaPredicted RBP12.28□□□□□ -0.44
GARNL3-221ENST00000497703 C11orf91Q3C1V1 193 aa12.27□□□□□ -0.45
GARNL3-221ENST00000497703 RHOQP17081 205 aa12.26□□□□□ -0.45
GARNL3-221ENST00000497703 MTMR3Q13615 1198 aa12.26□□□□□ -0.45
GARNL3-221ENST00000497703 AAMPQ13685 434 aa12.26□□□□□ -0.45
GARNL3-221ENST00000497703 ALKBH2Q6NS38 261 aa12.26□□□□□ -0.45
GARNL3-221ENST00000497703 KIFC2Q96AC6 838 aa12.26□□□□□ -0.45
GARNL3-221ENST00000497703 SAP130Q9H0E3 1048 aa12.26□□□□□ -0.45
GARNL3-221ENST00000497703 TXLNAP40222 546 aa12.25□□□□□ -0.45
GARNL3-221ENST00000497703 DGKZQ13574 1117 aa12.25□□□□□ -0.45
GARNL3-221ENST00000497703 ARSJQ5FYB0 599 aaPredicted RBP12.25□□□□□ -0.45
GARNL3-221ENST00000497703 PGBD3Q8N328 593 aa12.24□□□□□ -0.45
GARNL3-221ENST00000497703 ANKIB1Q9P2G1 1089 aa12.24□□□□□ -0.45
GARNL3-221ENST00000497703 GJA3Q9Y6H8 435 aa12.24□□□□□ -0.45
GARNL3-221ENST00000497703 DNMT3LQ9UJW3 386 aa12.23□□□□□ -0.45
GARNL3-221ENST00000497703 MARSP56192 900 aaKnown RBP12.22□□□□□ -0.45
GARNL3-221ENST00000497703 NOM1Q5C9Z4 860 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms