RNA–Protein interactions for RNA: ENST00000497663.1

TNRC18-210, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2

Gene TNRC18, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-210ENST00000497663 ZNF784Q8NCA9 323 aaPredicted RBP20.88■□□□□ 0.93
TNRC18-210ENST00000497663 CCER1Q8TC90 406 aaPredicted RBP20.88■□□□□ 0.93
TNRC18-210ENST00000497663 C5P01031 1676 aa20.88■□□□□ 0.93
TNRC18-210ENST00000497663 POLD1P28340 1107 aa20.87■□□□□ 0.93
TNRC18-210ENST00000497663 ASAP1Q9ULH1 1129 aa20.87■□□□□ 0.93
TNRC18-210ENST00000497663 POTEFA5A3E0 1075 aa20.86■□□□□ 0.93
TNRC18-210ENST00000497663 PHKG2P15735 406 aa20.86■□□□□ 0.93
TNRC18-210ENST00000497663 DPY19L2Q6NUT2 758 aa20.86■□□□□ 0.93
TNRC18-210ENST00000497663 LINC00116Q8NCU8 138 aa20.86■□□□□ 0.93
TNRC18-210ENST00000497663 PPP1R37O75864 691 aa20.85■□□□□ 0.93
TNRC18-210ENST00000497663 ITPK1Q13572 414 aa20.85■□□□□ 0.93
TNRC18-210ENST00000497663 SPG7Q9UQ90 795 aa20.85■□□□□ 0.93
TNRC18-210ENST00000497663 TAF1LQ8IZX4 1826 aa20.85■□□□□ 0.93
TNRC18-210ENST00000497663 GPR162Q16538 588 aa20.84■□□□□ 0.93
TNRC18-210ENST00000497663 AEBP1Q8IUX7 1158 aa20.84■□□□□ 0.93
TNRC18-210ENST00000497663 YBX3P16989 372 aaKnown RBP eCLIP20.83■□□□□ 0.93
TNRC18-210ENST00000497663 IGSF1Q8N6C5 1336 aa20.82■□□□□ 0.92
TNRC18-210ENST00000497663 C4BP0C0L5 1744 aa20.82■□□□□ 0.92
TNRC18-210ENST00000497663 G3V3G9 751 aa20.82■□□□□ 0.92
TNRC18-210ENST00000497663 PHF14O94880 888 aa20.82■□□□□ 0.92
TNRC18-210ENST00000497663 ATG3Q9NT62 314 aa20.82■□□□□ 0.92
TNRC18-210ENST00000497663 LOC102724428A0A0B4J2F2 783 aa20.81■□□□□ 0.92
TNRC18-210ENST00000497663 SIK1P57059 783 aa20.81■□□□□ 0.92
TNRC18-210ENST00000497663 L3MBTL3Q96JM7 780 aaPredicted RBP20.81■□□□□ 0.92
TNRC18-210ENST00000497663 SLC4A9Q96Q91 983 aa20.81■□□□□ 0.92
TNRC18-210ENST00000497663 IFNL2Q8IZJ0 200 aa20.8■□□□□ 0.92
TNRC18-210ENST00000497663 SMARCC1Q92922 1105 aaPredicted RBP20.8■□□□□ 0.92
TNRC18-210ENST00000497663 TMOD3Q9NYL9 352 aa20.8■□□□□ 0.92
TNRC18-210ENST00000497663 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.79■□□□□ 0.92
TNRC18-210ENST00000497663 AK7Q96M32 723 aa20.78■□□□□ 0.92
TNRC18-210ENST00000497663 KDM6AO15550 1401 aaPredicted RBP20.78■□□□□ 0.92
TNRC18-210ENST00000497663 MORC1Q86VD1 984 aa20.77■□□□□ 0.92
TNRC18-210ENST00000497663 UBR3Q6ZT12 1888 aa20.77■□□□□ 0.92
TNRC18-210ENST00000497663 WWC3Q9ULE0 1092 aa20.76■□□□□ 0.91
TNRC18-210ENST00000497663 BOLA1Q9Y3E2 137 aa20.76■□□□□ 0.91
TNRC18-210ENST00000497663 KIF7Q2M1P5 1343 aa20.76■□□□□ 0.91
TNRC18-210ENST00000497663 ATP6V1AP38606 617 aa20.75■□□□□ 0.91
TNRC18-210ENST00000497663 KDRP35968 1356 aa20.74■□□□□ 0.91
TNRC18-210ENST00000497663 CHD4Q14839 1912 aa20.74■□□□□ 0.91
TNRC18-210ENST00000497663 GNPATO15228 680 aa20.73■□□□□ 0.91
TNRC18-210ENST00000497663 IL13P35225 146 aa20.73■□□□□ 0.91
TNRC18-210ENST00000497663 ZNF530Q6P9A1 599 aaPredicted RBP20.73■□□□□ 0.91
TNRC18-210ENST00000497663 FLAD1Q8NFF5 587 aa20.72■□□□□ 0.91
TNRC18-210ENST00000497663 SULT6B1Q6IMI4 303 aa20.71■□□□□ 0.91
TNRC18-210ENST00000497663 SSFA2P28290 1259 aa20.7■□□□□ 0.9
TNRC18-210ENST00000497663 PLEKHO1Q53GL0 409 aaPredicted RBP20.7■□□□□ 0.9
TNRC18-210ENST00000497663 MICALL2Q8IY33 904 aa20.7■□□□□ 0.9
TNRC18-210ENST00000497663 KNSTRNQ9Y448 316 aa20.7■□□□□ 0.9
TNRC18-210ENST00000497663 CD2APQ9Y5K6 639 aa20.7■□□□□ 0.9
TNRC18-210ENST00000497663 ERVV-2B6SEH9 535 aa20.69■□□□□ 0.9
TNRC18-210ENST00000497663 DCAF5Q96JK2 942 aa20.69■□□□□ 0.9
TNRC18-210ENST00000497663 TSHZ2Q9NRE2 1034 aa20.69■□□□□ 0.9
TNRC18-210ENST00000497663 PER1O15534 1290 aaPredicted RBP20.67■□□□□ 0.9
TNRC18-210ENST00000497663 NFATC2IPQ8NCF5 419 aa20.66■□□□□ 0.9
TNRC18-210ENST00000497663 MTHFSP49914 203 aa20.65■□□□□ 0.9
TNRC18-210ENST00000497663 CABP4P57796 275 aa20.65■□□□□ 0.9
TNRC18-210ENST00000497663 CNGB1Q14028 1251 aaPredicted RBP20.65■□□□□ 0.9
TNRC18-210ENST00000497663 PTCD1O75127 700 aaKnown RBP20.64■□□□□ 0.89
TNRC18-210ENST00000497663 MMP10P09238 476 aa20.64■□□□□ 0.89
TNRC18-210ENST00000497663 HMOX1P09601 288 aa20.64■□□□□ 0.89
TNRC18-210ENST00000497663 AMOTQ4VCS5 1084 aa20.64■□□□□ 0.89
TNRC18-210ENST00000497663 CC2D1BQ5T0F9 858 aaKnown RBP20.64■□□□□ 0.89
TNRC18-210ENST00000497663 ARHGEF1Q92888 912 aaKnown RBP20.64■□□□□ 0.89
TNRC18-210ENST00000497663 TMEM121BQ9BXQ6 578 aaPredicted RBP20.64■□□□□ 0.89
TNRC18-210ENST00000497663 LGR6Q9HBX8 967 aa20.64■□□□□ 0.89
TNRC18-210ENST00000497663 PLEKHG2Q9H7P9 1386 aa20.63■□□□□ 0.89
TNRC18-210ENST00000497663 MYH14Q7Z406 1995 aaKnown RBP20.63■□□□□ 0.89
TNRC18-210ENST00000497663 GRIN3BO60391 1043 aa20.62■□□□□ 0.89
TNRC18-210ENST00000497663 HSP90AB1P08238 724 aaKnown RBP20.62■□□□□ 0.89
TNRC18-210ENST00000497663 C1QTNF8P60827 252 aa20.62■□□□□ 0.89
TNRC18-210ENST00000497663 COL5A3P25940 1745 aaPredicted RBP20.61■□□□□ 0.89
TNRC18-210ENST00000497663 TRAPPC3LQ5T215 181 aa20.61■□□□□ 0.89
TNRC18-210ENST00000497663 RTCBQ9Y3I0 505 aaKnown RBP20.61■□□□□ 0.89
TNRC18-210ENST00000497663 GYS1P13807 737 aa20.6■□□□□ 0.89
TNRC18-210ENST00000497663 C1orf141Q5JVX7 400 aa20.6■□□□□ 0.89
TNRC18-210ENST00000497663 C3orf67Q6ZVT6 689 aa20.6■□□□□ 0.89
TNRC18-210ENST00000497663 SRP68Q9UHB9 627 aaKnown RBP20.6■□□□□ 0.89
TNRC18-210ENST00000497663 CNTNAP4Q9C0A0 1308 aa20.59■□□□□ 0.89
TNRC18-210ENST00000497663 RC3H1Q5TC82 1133 aaKnown RBP20.59■□□□□ 0.89
TNRC18-210ENST00000497663 CICQ96RK0 1608 aaPredicted RBP20.58■□□□□ 0.89
TNRC18-210ENST00000497663 RPS6KA4O75676 772 aa20.58■□□□□ 0.89
TNRC18-210ENST00000497663 SLC39A6Q13433 755 aa20.58■□□□□ 0.89
TNRC18-210ENST00000497663 ATP10DQ9P241 1426 aa20.58■□□□□ 0.88
TNRC18-210ENST00000497663 ZNF831Q5JPB2 1677 aa20.58■□□□□ 0.88
TNRC18-210ENST00000497663 PXDNLA1KZ92 1463 aa20.57■□□□□ 0.88
TNRC18-210ENST00000497663 HMGB2P26583 209 aaKnown RBP20.57■□□□□ 0.88
TNRC18-210ENST00000497663 CRKLP46109 303 aaKnown RBP20.57■□□□□ 0.88
TNRC18-210ENST00000497663 TJP1Q07157 1748 aa20.57■□□□□ 0.88
TNRC18-210ENST00000497663 MTHFSDQ2M296 383 aaKnown RBP20.57■□□□□ 0.88
TNRC18-210ENST00000497663 KIAA1551Q9HCM1 1747 aa20.57■□□□□ 0.88
TNRC18-210ENST00000497663 A0A0G2JLW4 131 aa20.56■□□□□ 0.88
TNRC18-210ENST00000497663 POTEB2H3BUK9 544 aa20.56■□□□□ 0.88
TNRC18-210ENST00000497663 INTS5Q6P9B9 1019 aaKnown RBP20.56■□□□□ 0.88
TNRC18-210ENST00000497663 DNAJC10Q8IXB1 793 aa20.56■□□□□ 0.88
TNRC18-210ENST00000497663 SENP3-EIF4A1A0A087X0R7 540 aa20.55■□□□□ 0.88
TNRC18-210ENST00000497663 RNMTO43148 476 aaKnown RBP20.55■□□□□ 0.88
TNRC18-210ENST00000497663 AKAP4Q5JQC9 854 aa20.55■□□□□ 0.88
TNRC18-210ENST00000497663 ADCY9O60503 1353 aa20.55■□□□□ 0.88
TNRC18-210ENST00000497663 COL3A1P02461 1466 aaPredicted RBP20.55■□□□□ 0.88
TNRC18-210ENST00000497663 C4AP0C0L4 1744 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms