RNA–Protein interactions for RNA: ENST00000497006.1

SIGMAR1-207, Transcript of sigma non-opioid intracellular receptor 1, humanhuman

TSL 3

Gene SIGMAR1, Length 610 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1-207ENST00000497006 RIPK4P57078 832 aa23.31■■□□□ 1.32
SIGMAR1-207ENST00000497006 NLGN1Q8N2Q7 840 aa23.31■■□□□ 1.32
SIGMAR1-207ENST00000497006 RRP7AQ9Y3A4 280 aaKnown RBP23.31■■□□□ 1.32
SIGMAR1-207ENST00000497006 SMIM5Q71RC9 77 aa23.3■■□□□ 1.32
SIGMAR1-207ENST00000497006 SOS1Q07889 1333 aaPredicted RBP23.3■■□□□ 1.32
SIGMAR1-207ENST00000497006 TMPOP42166 694 aaKnown RBP23.29■■□□□ 1.32
SIGMAR1-207ENST00000497006 KDM3BQ7LBC6 1761 aa23.29■■□□□ 1.32
SIGMAR1-207ENST00000497006 THUMPD2Q9BTF0 503 aaKnown RBP23.28■■□□□ 1.32
SIGMAR1-207ENST00000497006 USP42Q9H9J4 1324 aaKnown RBP23.28■■□□□ 1.32
SIGMAR1-207ENST00000497006 COL15A1P39059 1388 aa23.27■■□□□ 1.32
SIGMAR1-207ENST00000497006 ZBTB1Q9Y2K1 713 aa23.27■■□□□ 1.32
SIGMAR1-207ENST00000497006 GYS1P13807 737 aa23.26■■□□□ 1.31
SIGMAR1-207ENST00000497006 KLHL34Q8N239 644 aa23.26■■□□□ 1.31
SIGMAR1-207ENST00000497006 KCNQ3O43525 872 aa23.25■■□□□ 1.31
SIGMAR1-207ENST00000497006 SNRPA1P09661 255 aaKnown RBP23.25■■□□□ 1.31
SIGMAR1-207ENST00000497006 MIS18AQ9NYP9 233 aa23.25■■□□□ 1.31
SIGMAR1-207ENST00000497006 CD2APQ9Y5K6 639 aa23.25■■□□□ 1.31
SIGMAR1-207ENST00000497006 LAMB4A4D0S4 1761 aa23.24■■□□□ 1.31
SIGMAR1-207ENST00000497006 A0A087WZG4 1122 aa23.24■■□□□ 1.31
SIGMAR1-207ENST00000497006 ZPR1O75312 459 aa23.24■■□□□ 1.31
SIGMAR1-207ENST00000497006 BABAM1Q9NWV8 329 aa23.24■■□□□ 1.31
SIGMAR1-207ENST00000497006 MMP10P09238 476 aa23.23■■□□□ 1.31
SIGMAR1-207ENST00000497006 CANXP27824 592 aaKnown RBP23.22■■□□□ 1.31
SIGMAR1-207ENST00000497006 NPM2Q86SE8 214 aaKnown RBP23.22■■□□□ 1.31
SIGMAR1-207ENST00000497006 SENP3-EIF4A1A0A087X0R7 540 aa23.21■■□□□ 1.31
SIGMAR1-207ENST00000497006 APAF1O14727 1248 aa23.21■■□□□ 1.31
SIGMAR1-207ENST00000497006 IL6STP40189 918 aaPredicted RBP23.21■■□□□ 1.31
SIGMAR1-207ENST00000497006 NARFQ9UHQ1 456 aa23.21■■□□□ 1.31
SIGMAR1-207ENST00000497006 EIF5P55010 431 aaKnown RBP23.2■■□□□ 1.3
SIGMAR1-207ENST00000497006 SRP68Q9UHB9 627 aaKnown RBP23.2■■□□□ 1.3
SIGMAR1-207ENST00000497006 PARP3Q9Y6F1 533 aa23.19■■□□□ 1.3
SIGMAR1-207ENST00000497006 KIF13BQ9NQT8 1826 aa23.19■■□□□ 1.3
SIGMAR1-207ENST00000497006 SCN7AQ01118 1682 aa23.19■■□□□ 1.3
SIGMAR1-207ENST00000497006 FAM9BQ8IZU0 186 aa23.18■■□□□ 1.3
SIGMAR1-207ENST00000497006 TSPYL4Q9UJ04 414 aa23.18■■□□□ 1.3
SIGMAR1-207ENST00000497006 USPL1Q5W0Q7 1092 aa23.17■■□□□ 1.3
SIGMAR1-207ENST00000497006 TRIM35Q9UPQ4 493 aa23.17■■□□□ 1.3
SIGMAR1-207ENST00000497006 USP16Q9Y5T5 823 aa23.17■■□□□ 1.3
SIGMAR1-207ENST00000497006 EIF4A1P60842 406 aaKnown RBP23.16■■□□□ 1.3
SIGMAR1-207ENST00000497006 FKBP8Q14318 412 aa23.16■■□□□ 1.3
SIGMAR1-207ENST00000497006 NLGN2Q8NFZ4 835 aa23.16■■□□□ 1.3
SIGMAR1-207ENST00000497006 LAS1LQ9Y4W2 734 aaKnown RBP23.16■■□□□ 1.3
SIGMAR1-207ENST00000497006 C10orf71Q711Q0 1435 aa23.16■■□□□ 1.3
SIGMAR1-207ENST00000497006 A1BGP04217 495 aa23.15■■□□□ 1.3
SIGMAR1-207ENST00000497006 GIGYF1O75420 1035 aaPredicted RBP23.14■■□□□ 1.29
SIGMAR1-207ENST00000497006 CALD1Q05682 793 aaKnown RBP23.14■■□□□ 1.29
SIGMAR1-207ENST00000497006 ZNF330Q9Y3S2 320 aaPredicted RBP23.14■■□□□ 1.29
SIGMAR1-207ENST00000497006 BCORQ6W2J9 1755 aa23.14■■□□□ 1.29
SIGMAR1-207ENST00000497006 PRAMEF22A3QJZ6 481 aa23.13■■□□□ 1.29
SIGMAR1-207ENST00000497006 GPR162Q16538 588 aa23.12■■□□□ 1.29
SIGMAR1-207ENST00000497006 DIEXFQ68CQ4 756 aaKnown RBP23.12■■□□□ 1.29
SIGMAR1-207ENST00000497006 ERBB4Q15303 1308 aa23.11■■□□□ 1.29
SIGMAR1-207ENST00000497006 RGL2O15211 777 aa23.11■■□□□ 1.29
SIGMAR1-207ENST00000497006 TM4SF1P30408 202 aa23.11■■□□□ 1.29
SIGMAR1-207ENST00000497006 TGFB2P61812 414 aa23.11■■□□□ 1.29
SIGMAR1-207ENST00000497006 POLRMTO00411 1230 aaKnown RBP23.1■■□□□ 1.29
SIGMAR1-207ENST00000497006 DZIP3Q86Y13 1208 aaKnown RBP23.1■■□□□ 1.29
SIGMAR1-207ENST00000497006 NRXN2Q9P2S2 1712 aa23.09■■□□□ 1.29
SIGMAR1-207ENST00000497006 CHL1O00533 1208 aa23.09■■□□□ 1.29
SIGMAR1-207ENST00000497006 DDR1Q08345 913 aa23.09■■□□□ 1.29
SIGMAR1-207ENST00000497006 BCL2L12Q9HB09 334 aa23.09■■□□□ 1.29
SIGMAR1-207ENST00000497006 SALL2Q9Y467 1007 aaPredicted RBP23.09■■□□□ 1.29
SIGMAR1-207ENST00000497006 NFIXQ14938 502 aa23.08■■□□□ 1.29
SIGMAR1-207ENST00000497006 CFAP44Q96MT7 982 aa23.08■■□□□ 1.29
SIGMAR1-207ENST00000497006 TBC1D2BQ9UPU7 963 aa23.08■■□□□ 1.29
SIGMAR1-207ENST00000497006 ZNF652Q9Y2D9 606 aa23.08■■□□□ 1.29
SIGMAR1-207ENST00000497006 PXDNLA1KZ92 1463 aa23.07■■□□□ 1.28
SIGMAR1-207ENST00000497006 GRIN3BO60391 1043 aa23.07■■□□□ 1.28
SIGMAR1-207ENST00000497006 CAMTA2O94983 1202 aa23.07■■□□□ 1.28
SIGMAR1-207ENST00000497006 PIP4K2AP48426 406 aaPredicted RBP23.07■■□□□ 1.28
SIGMAR1-207ENST00000497006 CLEC4GQ6UXB4 293 aa23.07■■□□□ 1.28
SIGMAR1-207ENST00000497006 PELP1Q8IZL8 1130 aaKnown RBP23.07■■□□□ 1.28
SIGMAR1-207ENST00000497006 CHD4Q14839 1912 aa23.07■■□□□ 1.28
SIGMAR1-207ENST00000497006 AFDNP55196 1824 aaKnown RBP23.07■■□□□ 1.28
SIGMAR1-207ENST00000497006 KIAA1551Q9HCM1 1747 aa23.07■■□□□ 1.28
SIGMAR1-207ENST00000497006 CARMIL3Q8ND23 1372 aa23.06■■□□□ 1.28
SIGMAR1-207ENST00000497006 NBPF26B4DH59 902 aa23.06■■□□□ 1.28
SIGMAR1-207ENST00000497006 NCBP3Q53F19 620 aaKnown RBP23.06■■□□□ 1.28
SIGMAR1-207ENST00000497006 NBPF10Q6P3W6 841 aaKnown RBP23.06■■□□□ 1.28
SIGMAR1-207ENST00000497006 NBPF15Q8N660 670 aa23.06■■□□□ 1.28
SIGMAR1-207ENST00000497006 IFT57Q9NWB7 429 aa23.05■■□□□ 1.28
SIGMAR1-207ENST00000497006 HOXB7P09629 217 aa23.04■■□□□ 1.28
SIGMAR1-207ENST00000497006 CCDC27Q2M243 656 aa23.04■■□□□ 1.28
SIGMAR1-207ENST00000497006 SERPINB2P05120 415 aa23.03■■□□□ 1.28
SIGMAR1-207ENST00000497006 GNAI1P63096 354 aa23.03■■□□□ 1.28
SIGMAR1-207ENST00000497006 N4BP2Q86UW6 1770 aaPredicted RBP23.03■■□□□ 1.28
SIGMAR1-207ENST00000497006 TBC1D9BQ66K14 1250 aa23.02■■□□□ 1.28
SIGMAR1-207ENST00000497006 SETDB2Q96T68 719 aa23.02■■□□□ 1.28
SIGMAR1-207ENST00000497006 BRCA1P38398 1863 aaKnown RBP23.01■■□□□ 1.27
SIGMAR1-207ENST00000497006 YBX3P16989 372 aaKnown RBP eCLIP23.01■■□□□ 1.27
SIGMAR1-207ENST00000497006 EIF2S2P20042 333 aaKnown RBP23.01■■□□□ 1.27
SIGMAR1-207ENST00000497006 BICDL1Q6ZP65 573 aa23.01■■□□□ 1.27
SIGMAR1-207ENST00000497006 UTRNP46939 3433 aa23■■□□□ 1.27
SIGMAR1-207ENST00000497006 GOLGB1Q14789 3259 aaKnown RBP23■■□□□ 1.27
SIGMAR1-207ENST00000497006 CCER2I3L3R5 266 aa23■■□□□ 1.27
SIGMAR1-207ENST00000497006 ZNF853P0CG23 659 aa23■■□□□ 1.27
SIGMAR1-207ENST00000497006 YY1P25490 414 aa23■■□□□ 1.27
SIGMAR1-207ENST00000497006 KIF6Q6ZMV9 814 aa23■■□□□ 1.27
SIGMAR1-207ENST00000497006 WWC1Q8IX03 1113 aa23■■□□□ 1.27
SIGMAR1-207ENST00000497006 MIER1Q8N108 512 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms