RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 STK31Q9BXU1 1019 aa23.44■■□□□ 1.34
RGP1-202ENST00000496906 CHPF2Q9P2E5 772 aa23.44■■□□□ 1.34
RGP1-202ENST00000496906 CYP19A1P11511 503 aaPredicted RBP23.43■■□□□ 1.34
RGP1-202ENST00000496906 UPF1Q92900 1129 aaKnown RBP eCLIP23.43■■□□□ 1.341e-7■■□□□ 12.8
RGP1-202ENST00000496906 ERBB4Q15303 1308 aa23.42■■□□□ 1.34
RGP1-202ENST00000496906 PDIA6Q15084 440 aa23.42■■□□□ 1.34
RGP1-202ENST00000496906 DBF4Q9UBU7 674 aaPredicted RBP23.42■■□□□ 1.34
RGP1-202ENST00000496906 SLC4A2P04920 1241 aa23.41■■□□□ 1.34
RGP1-202ENST00000496906 KCNQ4P56696 695 aa23.41■■□□□ 1.34
RGP1-202ENST00000496906 SLC27A3Q5K4L6 730 aa23.41■■□□□ 1.34
RGP1-202ENST00000496906 RGPD3A6NKT7 1758 aaPredicted RBP23.41■■□□□ 1.34
RGP1-202ENST00000496906 RGPD4Q7Z3J3 1758 aa23.41■■□□□ 1.34
RGP1-202ENST00000496906 COL5A3P25940 1745 aaPredicted RBP23.41■■□□□ 1.34
RGP1-202ENST00000496906 PROSER3Q2NL68 480 aa23.4■■□□□ 1.34
RGP1-202ENST00000496906 CCDC125Q86Z20 511 aa23.4■■□□□ 1.34
RGP1-202ENST00000496906 DDX21Q9NR30 783 aaKnown RBP eCLIP23.4■■□□□ 1.34
RGP1-202ENST00000496906 A1BGP04217 495 aa23.4■■□□□ 1.34
RGP1-202ENST00000496906 LINC00116Q8NCU8 138 aa23.4■■□□□ 1.34
RGP1-202ENST00000496906 LRRC4BQ9NT99 713 aa23.4■■□□□ 1.34
RGP1-202ENST00000496906 SUPT16HQ9Y5B9 1047 aaKnown RBP23.4■■□□□ 1.34
RGP1-202ENST00000496906 NBPF26B4DH59 902 aa23.39■■□□□ 1.33
RGP1-202ENST00000496906 ANXA1P04083 346 aa23.39■■□□□ 1.33
RGP1-202ENST00000496906 TXNRD1Q16881 649 aa23.39■■□□□ 1.33
RGP1-202ENST00000496906 NBPF14Q5TI25 921 aa23.39■■□□□ 1.33
RGP1-202ENST00000496906 NBPF10Q6P3W6 841 aaKnown RBP23.39■■□□□ 1.33
RGP1-202ENST00000496906 PROM2Q8N271 834 aa23.39■■□□□ 1.33
RGP1-202ENST00000496906 NBPF15Q8N660 670 aa23.39■■□□□ 1.33
RGP1-202ENST00000496906 RNF123Q5XPI4 1314 aa23.38■■□□□ 1.33
RGP1-202ENST00000496906 KIF16BQ96L93 1317 aa23.38■■□□□ 1.33
RGP1-202ENST00000496906 PIP4K2AP48426 406 aaPredicted RBP23.38■■□□□ 1.33
RGP1-202ENST00000496906 LRP10Q7Z4F1 713 aa23.38■■□□□ 1.33
RGP1-202ENST00000496906 RREB1Q92766 1687 aa23.37■■□□□ 1.33
RGP1-202ENST00000496906 CRKLP46109 303 aaKnown RBP23.37■■□□□ 1.33
RGP1-202ENST00000496906 SF3B2Q13435 895 aaKnown RBP23.37■■□□□ 1.33
RGP1-202ENST00000496906 HYPKQ9NX55 129 aa23.37■■□□□ 1.33
RGP1-202ENST00000496906 TAF1LQ8IZX4 1826 aa23.36■■□□□ 1.33
RGP1-202ENST00000496906 MYL6BP14649 208 aa23.36■■□□□ 1.33
RGP1-202ENST00000496906 RRP1P56182 461 aaKnown RBP23.36■■□□□ 1.33
RGP1-202ENST00000496906 INTS5Q6P9B9 1019 aaKnown RBP23.36■■□□□ 1.33
RGP1-202ENST00000496906 G2E3Q7L622 706 aa23.36■■□□□ 1.33
RGP1-202ENST00000496906 CCDC87Q9NVE4 849 aa23.36■■□□□ 1.33
RGP1-202ENST00000496906 NOB1Q9ULX3 412 aaKnown RBP23.36■■□□□ 1.33
RGP1-202ENST00000496906 ZBTB1Q9Y2K1 713 aa23.36■■□□□ 1.33
RGP1-202ENST00000496906 CNTNAP4Q9C0A0 1308 aa23.36■■□□□ 1.33
RGP1-202ENST00000496906 CACNA1FO60840 1977 aa23.36■■□□□ 1.33
RGP1-202ENST00000496906 PHAXQ9H814 394 aaKnown RBP23.35■■□□□ 1.33
RGP1-202ENST00000496906 FLIIQ13045 1269 aa23.35■■□□□ 1.33
RGP1-202ENST00000496906 FRAT1Q92837 279 aaPredicted RBP23.35■■□□□ 1.33
RGP1-202ENST00000496906 CAMKK2Q96RR4 588 aa23.35■■□□□ 1.33
RGP1-202ENST00000496906 MYH14Q7Z406 1995 aaKnown RBP23.34■■□□□ 1.33
RGP1-202ENST00000496906 BAG6P46379 1132 aa23.34■■□□□ 1.33
RGP1-202ENST00000496906 EN1Q05925 392 aaPredicted RBP23.34■■□□□ 1.33
RGP1-202ENST00000496906 RC3H1Q5TC82 1133 aaKnown RBP23.34■■□□□ 1.33
RGP1-202ENST00000496906 PLIN1O60240 522 aa23.33■■□□□ 1.33
RGP1-202ENST00000496906 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.33■■□□□ 1.33
RGP1-202ENST00000496906 C4BP0C0L5 1744 aa23.33■■□□□ 1.33
RGP1-202ENST00000496906 PTPRCP08575 1304 aa23.32■■□□□ 1.32
RGP1-202ENST00000496906 CANXP27824 592 aaKnown RBP23.32■■□□□ 1.32
RGP1-202ENST00000496906 ZKSCAN2Q63HK3 967 aa23.32■■□□□ 1.32
RGP1-202ENST00000496906 SOCS7O14512 581 aa23.31■■□□□ 1.32
RGP1-202ENST00000496906 IPO8O15397 1037 aaKnown RBP23.31■■□□□ 1.32
RGP1-202ENST00000496906 IL6STP40189 918 aaPredicted RBP23.31■■□□□ 1.32
RGP1-202ENST00000496906 EZH2Q15910 746 aaKnown RBP23.31■■□□□ 1.32
RGP1-202ENST00000496906 ARHGAP45Q92619 1136 aa23.31■■□□□ 1.32
RGP1-202ENST00000496906 HMGB2P26583 209 aaKnown RBP23.31■■□□□ 1.32
RGP1-202ENST00000496906 DEFB132Q7Z7B7 95 aa23.31■■□□□ 1.32
RGP1-202ENST00000496906 TRIM27P14373 513 aa23.3■■□□□ 1.32
RGP1-202ENST00000496906 ATF7IPQ6VMQ6 1270 aa23.3■■□□□ 1.32
RGP1-202ENST00000496906 XAGE3Q8WTP9 111 aa23.3■■□□□ 1.32
RGP1-202ENST00000496906 EIF5P55010 431 aaKnown RBP23.29■■□□□ 1.32
RGP1-202ENST00000496906 FKBP5Q13451 457 aaPredicted RBP23.29■■□□□ 1.32
RGP1-202ENST00000496906 COPS6Q7L5N1 327 aa23.29■■□□□ 1.32
RGP1-202ENST00000496906 AIMP1Q12904 312 aaKnown RBP23.28■■□□□ 1.32
RGP1-202ENST00000496906 API5Q9BZZ5 524 aaKnown RBP23.28■■□□□ 1.32
RGP1-202ENST00000496906 TNNQ9UQP3 1299 aa23.28■■□□□ 1.32
RGP1-202ENST00000496906 ZNF330Q9Y3S2 320 aaPredicted RBP23.28■■□□□ 1.32
RGP1-202ENST00000496906 GNPATO15228 680 aa23.27■■□□□ 1.32
RGP1-202ENST00000496906 RPS6KA4O75676 772 aa23.27■■□□□ 1.32
RGP1-202ENST00000496906 AK7Q96M32 723 aa23.27■■□□□ 1.32
RGP1-202ENST00000496906 TTLL7Q6ZT98 887 aa23.26■■□□□ 1.31
RGP1-202ENST00000496906 ADCY9O60503 1353 aa23.26■■□□□ 1.31
RGP1-202ENST00000496906 COL15A1P39059 1388 aa23.26■■□□□ 1.31
RGP1-202ENST00000496906 DDX58O95786 925 aaKnown RBP23.25■■□□□ 1.31
RGP1-202ENST00000496906 PI4KAP2A4QPH2 592 aa23.24■■□□□ 1.31
RGP1-202ENST00000496906 PDE3AQ14432 1141 aa23.24■■□□□ 1.31
RGP1-202ENST00000496906 C20orf194Q5TEA3 1177 aa23.24■■□□□ 1.31
RGP1-202ENST00000496906 KSR2Q6VAB6 950 aa23.24■■□□□ 1.31
RGP1-202ENST00000496906 AMIGO3Q86WK7 504 aa23.24■■□□□ 1.31
RGP1-202ENST00000496906 PI4KAP1Q8N8J0 262 aa23.24■■□□□ 1.31
RGP1-202ENST00000496906 CLUAP1Q96AJ1 413 aa23.24■■□□□ 1.31
RGP1-202ENST00000496906 AKT1S1Q96B36 256 aa23.24■■□□□ 1.31
RGP1-202ENST00000496906 RTCBQ9Y3I0 505 aaKnown RBP23.24■■□□□ 1.31
RGP1-202ENST00000496906 ABCC4O15439 1325 aa23.24■■□□□ 1.31
RGP1-202ENST00000496906 F6X3S4 739 aa23.23■■□□□ 1.31
RGP1-202ENST00000496906 NPM2Q86SE8 214 aaKnown RBP23.23■■□□□ 1.31
RGP1-202ENST00000496906 DZIP1LQ8IYY4 767 aaKnown RBP23.23■■□□□ 1.31
RGP1-202ENST00000496906 RLBP1P12271 317 aa23.23■■□□□ 1.31
RGP1-202ENST00000496906 ZNF827Q17R98 1081 aa23.23■■□□□ 1.31
RGP1-202ENST00000496906 ANKRD13DQ6ZTN6 518 aa23.23■■□□□ 1.31
RGP1-202ENST00000496906 FTSJ3Q8IY81 847 aaKnown RBP23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms