RNA–Protein interactions for RNA: ENST00000496358.1

COPS6-210, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 2

Gene COPS6, Length 610 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-210ENST00000496358 KLHL34Q8N239 644 aa24.16■■□□□ 1.46
COPS6-210ENST00000496358 RRP7AQ9Y3A4 280 aaKnown RBP24.16■■□□□ 1.46
COPS6-210ENST00000496358 C4AP0C0L4 1744 aa24.15■■□□□ 1.46
COPS6-210ENST00000496358 LMOD3Q0VAK6 560 aa24.15■■□□□ 1.46
COPS6-210ENST00000496358 CCDC184Q52MB2 194 aa24.15■■□□□ 1.46
COPS6-210ENST00000496358 PNISRQ8TF01 805 aaKnown RBP24.15■■□□□ 1.46
COPS6-210ENST00000496358 SYT17Q9BSW7 474 aa24.15■■□□□ 1.46
COPS6-210ENST00000496358 MIS18AQ9NYP9 233 aa24.15■■□□□ 1.46
COPS6-210ENST00000496358 ZBTB1Q9Y2K1 713 aa24.14■■□□□ 1.45
COPS6-210ENST00000496358 KDM3BQ7LBC6 1761 aa24.12■■□□□ 1.45
COPS6-210ENST00000496358 CANXP27824 592 aaKnown RBP24.12■■□□□ 1.45
COPS6-210ENST00000496358 SOS1Q07889 1333 aaPredicted RBP24.11■■□□□ 1.45
COPS6-210ENST00000496358 NLGN1Q8N2Q7 840 aa24.11■■□□□ 1.45
COPS6-210ENST00000496358 SNRPA1P09661 255 aaKnown RBP24.1■■□□□ 1.45
COPS6-210ENST00000496358 MRS2Q9HD23 443 aa24.1■■□□□ 1.45
COPS6-210ENST00000496358 ZPR1O75312 459 aa24.09■■□□□ 1.45
COPS6-210ENST00000496358 GYS1P13807 737 aa24.09■■□□□ 1.45
COPS6-210ENST00000496358 SRP68Q9UHB9 627 aaKnown RBP24.09■■□□□ 1.45
COPS6-210ENST00000496358 USP42Q9H9J4 1324 aaKnown RBP24.09■■□□□ 1.45
COPS6-210ENST00000496358 COL15A1P39059 1388 aa24.08■■□□□ 1.45
COPS6-210ENST00000496358 USP16Q9Y5T5 823 aa24.08■■□□□ 1.45
COPS6-210ENST00000496358 PRAMEF22A3QJZ6 481 aa24.07■■□□□ 1.44
COPS6-210ENST00000496358 MMP10P09238 476 aa24.07■■□□□ 1.44
COPS6-210ENST00000496358 IFFO2Q5TF58 517 aa24.07■■□□□ 1.44
COPS6-210ENST00000496358 SENP3-EIF4A1A0A087X0R7 540 aa24.06■■□□□ 1.44
COPS6-210ENST00000496358 A1BGP04217 495 aa24.06■■□□□ 1.44
COPS6-210ENST00000496358 TSPYL4Q9UJ04 414 aa24.06■■□□□ 1.44
COPS6-210ENST00000496358 TRIM35Q9UPQ4 493 aa24.06■■□□□ 1.44
COPS6-210ENST00000496358 ZNF330Q9Y3S2 320 aaPredicted RBP24.06■■□□□ 1.44
COPS6-210ENST00000496358 APAF1O14727 1248 aa24.05■■□□□ 1.44
COPS6-210ENST00000496358 EIF5P55010 431 aaKnown RBP24.05■■□□□ 1.44
COPS6-210ENST00000496358 USPL1Q5W0Q7 1092 aa24.05■■□□□ 1.44
COPS6-210ENST00000496358 NPM2Q86SE8 214 aaKnown RBP24.05■■□□□ 1.44
COPS6-210ENST00000496358 A0A087WZG4 1122 aa24.04■■□□□ 1.44
COPS6-210ENST00000496358 IL6STP40189 918 aaPredicted RBP24.04■■□□□ 1.44
COPS6-210ENST00000496358 EIF4A1P60842 406 aaKnown RBP24.04■■□□□ 1.44
COPS6-210ENST00000496358 NARFQ9UHQ1 456 aa24.04■■□□□ 1.44
COPS6-210ENST00000496358 FKBP8Q14318 412 aa24.03■■□□□ 1.44
COPS6-210ENST00000496358 BABAM1Q9NWV8 329 aa24.03■■□□□ 1.44
COPS6-210ENST00000496358 CD2APQ9Y5K6 639 aa24.03■■□□□ 1.44
COPS6-210ENST00000496358 LAMB4A4D0S4 1761 aa24.03■■□□□ 1.44
COPS6-210ENST00000496358 NLGN2Q8NFZ4 835 aa24.02■■□□□ 1.44
COPS6-210ENST00000496358 PARP3Q9Y6F1 533 aa24.02■■□□□ 1.44
COPS6-210ENST00000496358 GIGYF1O75420 1035 aaPredicted RBP24.01■■□□□ 1.43
COPS6-210ENST00000496358 LAS1LQ9Y4W2 734 aaKnown RBP24.01■■□□□ 1.43
COPS6-210ENST00000496358 PIP4K2AP48426 406 aaPredicted RBP24■■□□□ 1.43
COPS6-210ENST00000496358 ZNF784Q8NCA9 323 aaPredicted RBP24■■□□□ 1.43
COPS6-210ENST00000496358 TBC1D2BQ9UPU7 963 aa23.99■■□□□ 1.43
COPS6-210ENST00000496358 CHL1O00533 1208 aa23.96■■□□□ 1.43
COPS6-210ENST00000496358 TM4SF1P30408 202 aa23.96■■□□□ 1.43
COPS6-210ENST00000496358 BCL2L12Q9HB09 334 aa23.96■■□□□ 1.43
COPS6-210ENST00000496358 NBPF26B4DH59 902 aa23.95■■□□□ 1.42
COPS6-210ENST00000496358 DDR1Q08345 913 aa23.95■■□□□ 1.42
COPS6-210ENST00000496358 GPR162Q16538 588 aa23.95■■□□□ 1.42
COPS6-210ENST00000496358 NBPF10Q6P3W6 841 aaKnown RBP23.95■■□□□ 1.42
COPS6-210ENST00000496358 DZIP3Q86Y13 1208 aaKnown RBP23.95■■□□□ 1.42
COPS6-210ENST00000496358 PELP1Q8IZL8 1130 aaKnown RBP23.95■■□□□ 1.42
COPS6-210ENST00000496358 NBPF15Q8N660 670 aa23.95■■□□□ 1.42
COPS6-210ENST00000496358 KIF13BQ9NQT8 1826 aa23.95■■□□□ 1.42
COPS6-210ENST00000496358 SCN7AQ01118 1682 aa23.95■■□□□ 1.42
COPS6-210ENST00000496358 CALD1Q05682 793 aaKnown RBP23.94■■□□□ 1.42
COPS6-210ENST00000496358 NFIXQ14938 502 aa23.94■■□□□ 1.42
COPS6-210ENST00000496358 POLRMTO00411 1230 aaKnown RBP23.93■■□□□ 1.42
COPS6-210ENST00000496358 CFAP44Q96MT7 982 aa23.93■■□□□ 1.42
COPS6-210ENST00000496358 AFDNP55196 1824 aaKnown RBP23.92■■□□□ 1.42
COPS6-210ENST00000496358 CAMTA2O94983 1202 aa23.92■■□□□ 1.42
COPS6-210ENST00000496358 BICDL1Q6ZP65 573 aa23.92■■□□□ 1.42
COPS6-210ENST00000496358 FAM9BQ8IZU0 186 aa23.92■■□□□ 1.42
COPS6-210ENST00000496358 BCORQ6W2J9 1755 aa23.92■■□□□ 1.42
COPS6-210ENST00000496358 EIF2S2P20042 333 aaKnown RBP23.91■■□□□ 1.42
COPS6-210ENST00000496358 C1QTNF8P60827 252 aa23.91■■□□□ 1.42
COPS6-210ENST00000496358 C10orf71Q711Q0 1435 aa23.91■■□□□ 1.42
COPS6-210ENST00000496358 UTRNP46939 3433 aa23.9■■□□□ 1.42
COPS6-210ENST00000496358 NGEFQ8N5V2 710 aa23.9■■□□□ 1.42
COPS6-210ENST00000496358 N4BP2Q86UW6 1770 aaPredicted RBP23.9■■□□□ 1.42
COPS6-210ENST00000496358 MYL6BP14649 208 aa23.89■■□□□ 1.41
COPS6-210ENST00000496358 TGFB2P61812 414 aa23.89■■□□□ 1.41
COPS6-210ENST00000496358 GNAI1P63096 354 aa23.89■■□□□ 1.41
COPS6-210ENST00000496358 TBC1D9BQ66K14 1250 aa23.89■■□□□ 1.41
COPS6-210ENST00000496358 IFT57Q9NWB7 429 aa23.89■■□□□ 1.41
COPS6-210ENST00000496358 SERPINB2P05120 415 aa23.88■■□□□ 1.41
COPS6-210ENST00000496358 MBIPQ9NS73 344 aa23.88■■□□□ 1.41
COPS6-210ENST00000496358 ERBB4Q15303 1308 aa23.87■■□□□ 1.41
COPS6-210ENST00000496358 ZNF853P0CG23 659 aa23.87■■□□□ 1.41
COPS6-210ENST00000496358 CCDC27Q2M243 656 aa23.87■■□□□ 1.41
COPS6-210ENST00000496358 KRT24Q2M2I5 525 aa23.87■■□□□ 1.41
COPS6-210ENST00000496358 ZNF652Q9Y2D9 606 aa23.87■■□□□ 1.41
COPS6-210ENST00000496358 CLEC4GQ6UXB4 293 aa23.86■■□□□ 1.41
COPS6-210ENST00000496358 NECTIN2Q92692 538 aa23.86■■□□□ 1.41
COPS6-210ENST00000496358 WWC3Q9ULE0 1092 aa23.86■■□□□ 1.41
COPS6-210ENST00000496358 KIAA1551Q9HCM1 1747 aa23.86■■□□□ 1.41
COPS6-210ENST00000496358 NRXN2Q9P2S2 1712 aa23.86■■□□□ 1.41
COPS6-210ENST00000496358 A0A0G2JLW4 131 aa23.85■■□□□ 1.41
COPS6-210ENST00000496358 WWC1Q8IX03 1113 aa23.85■■□□□ 1.41
COPS6-210ENST00000496358 SETDB2Q96T68 719 aa23.85■■□□□ 1.41
COPS6-210ENST00000496358 PXDNLA1KZ92 1463 aa23.85■■□□□ 1.41
COPS6-210ENST00000496358 CHD4Q14839 1912 aa23.84■■□□□ 1.41
COPS6-210ENST00000496358 CARMIL3Q8ND23 1372 aa23.84■■□□□ 1.41
COPS6-210ENST00000496358 YBX3P16989 372 aaKnown RBP eCLIP23.84■■□□□ 1.412e-7■□□□□ 9.8
COPS6-210ENST00000496358 NCBP3Q53F19 620 aaKnown RBP23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms