RNA–Protein interactions for RNA: ENST00000496335.1

PDAP1-204, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 302 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-204ENST00000496335 GOLGB1Q14789 3259 aaKnown RBP19.16■□□□□ 0.66
PDAP1-204ENST00000496335 STARD3NLO95772 234 aa19.16■□□□□ 0.66
PDAP1-204ENST00000496335 GPR162Q16538 588 aa19.16■□□□□ 0.66
PDAP1-204ENST00000496335 PELP1Q8IZL8 1130 aaKnown RBP19.16■□□□□ 0.66
PDAP1-204ENST00000496335 THUMPD2Q9BTF0 503 aaKnown RBP19.16■□□□□ 0.66
PDAP1-204ENST00000496335 MIS18AQ9NYP9 233 aa19.16■□□□□ 0.66
PDAP1-204ENST00000496335 USP42Q9H9J4 1324 aaKnown RBP19.16■□□□□ 0.66
PDAP1-204ENST00000496335 FKBP8Q14318 412 aa19.15■□□□□ 0.66
PDAP1-204ENST00000496335 TAF7Q15545 349 aaPredicted RBP19.15■□□□□ 0.66
PDAP1-204ENST00000496335 PRAMEF22A3QJZ6 481 aa19.14■□□□□ 0.65
PDAP1-204ENST00000496335 CCDC146Q8IYE0 955 aa19.14■□□□□ 0.65
PDAP1-204ENST00000496335 TEX13AQ9BXU3 409 aaPredicted RBP19.14■□□□□ 0.65
PDAP1-204ENST00000496335 COL15A1P39059 1388 aa19.14■□□□□ 0.65
PDAP1-204ENST00000496335 ZPR1O75312 459 aa19.13■□□□□ 0.65
PDAP1-204ENST00000496335 WDR43Q15061 677 aaKnown RBP eCLIP19.13■□□□□ 0.65
PDAP1-204ENST00000496335 USPL1Q5W0Q7 1092 aa19.13■□□□□ 0.65
PDAP1-204ENST00000496335 USP16Q9Y5T5 823 aa19.13■□□□□ 0.65
PDAP1-204ENST00000496335 A1BGP04217 495 aa19.12■□□□□ 0.65
PDAP1-204ENST00000496335 RIPK4P57078 832 aa19.12■□□□□ 0.65
PDAP1-204ENST00000496335 ADAMTS8Q9UP79 889 aa19.12■□□□□ 0.65
PDAP1-204ENST00000496335 YY1P25490 414 aa19.11■□□□□ 0.65
PDAP1-204ENST00000496335 EIF5P55010 431 aaKnown RBP19.11■□□□□ 0.65
PDAP1-204ENST00000496335 NARFQ9UHQ1 456 aa19.11■□□□□ 0.65
PDAP1-204ENST00000496335 RRP7AQ9Y3A4 280 aaKnown RBP19.11■□□□□ 0.65
PDAP1-204ENST00000496335 ZNF330Q9Y3S2 320 aaPredicted RBP19.11■□□□□ 0.65
PDAP1-204ENST00000496335 PARP3Q9Y6F1 533 aa19.11■□□□□ 0.65
PDAP1-204ENST00000496335 SNRPA1P09661 255 aaKnown RBP19.1■□□□□ 0.65
PDAP1-204ENST00000496335 YBX3P16989 372 aaKnown RBP eCLIP19.1■□□□□ 0.651e-9■□□□□ 8.6
PDAP1-204ENST00000496335 TMPOP42166 694 aaKnown RBP19.1■□□□□ 0.65
PDAP1-204ENST00000496335 DDR1Q08345 913 aa19.1■□□□□ 0.65
PDAP1-204ENST00000496335 WWC3Q9ULE0 1092 aa19.1■□□□□ 0.65
PDAP1-204ENST00000496335 CHD4Q14839 1912 aa19.1■□□□□ 0.65
PDAP1-204ENST00000496335 KIF13BQ9NQT8 1826 aa19.09■□□□□ 0.65
PDAP1-204ENST00000496335 KDM3BQ7LBC6 1761 aa19.09■□□□□ 0.65
PDAP1-204ENST00000496335 PIP4K2AP48426 406 aaPredicted RBP19.09■□□□□ 0.65
PDAP1-204ENST00000496335 NEUROD2Q15784 382 aa19.09■□□□□ 0.65
PDAP1-204ENST00000496335 BCL2L12Q9HB09 334 aa19.09■□□□□ 0.65
PDAP1-204ENST00000496335 TM4SF1P30408 202 aa19.08■□□□□ 0.64
PDAP1-204ENST00000496335 PNISRQ8TF01 805 aaKnown RBP19.08■□□□□ 0.64
PDAP1-204ENST00000496335 RUNDC1Q96C34 613 aa19.08■□□□□ 0.64
PDAP1-204ENST00000496335 N4BP2Q86UW6 1770 aaPredicted RBP19.07■□□□□ 0.64
PDAP1-204ENST00000496335 IL6STP40189 918 aaPredicted RBP19.07■□□□□ 0.64
PDAP1-204ENST00000496335 CCDC184Q52MB2 194 aa19.07■□□□□ 0.64
PDAP1-204ENST00000496335 TBC1D2BQ9UPU7 963 aa19.07■□□□□ 0.64
PDAP1-204ENST00000496335 C10orf71Q711Q0 1435 aa19.07■□□□□ 0.64
PDAP1-204ENST00000496335 A0A087WZG4 1122 aa19.06■□□□□ 0.64
PDAP1-204ENST00000496335 POLRMTO00411 1230 aaKnown RBP19.06■□□□□ 0.64
PDAP1-204ENST00000496335 NFIXQ14938 502 aa19.06■□□□□ 0.64
PDAP1-204ENST00000496335 KIAA1551Q9HCM1 1747 aa19.05■□□□□ 0.64
PDAP1-204ENST00000496335 A0A0G2JLW4 131 aa19.05■□□□□ 0.64
PDAP1-204ENST00000496335 EIF4A1P60842 406 aaKnown RBP19.05■□□□□ 0.64
PDAP1-204ENST00000496335 AFDNP55196 1824 aaKnown RBP19.04■□□□□ 0.64
PDAP1-204ENST00000496335 PXDNLA1KZ92 1463 aa19.04■□□□□ 0.64
PDAP1-204ENST00000496335 NBPF26B4DH59 902 aa19.03■□□□□ 0.64
PDAP1-204ENST00000496335 GIGYF1O75420 1035 aaPredicted RBP19.03■□□□□ 0.64
PDAP1-204ENST00000496335 TGFB2P61812 414 aa19.03■□□□□ 0.64
PDAP1-204ENST00000496335 LMOD3Q0VAK6 560 aa19.03■□□□□ 0.64
PDAP1-204ENST00000496335 NBPF10Q6P3W6 841 aaKnown RBP19.03■□□□□ 0.64
PDAP1-204ENST00000496335 BICDL1Q6ZP65 573 aa19.03■□□□□ 0.64
PDAP1-204ENST00000496335 NPM2Q86SE8 214 aaKnown RBP19.03■□□□□ 0.64
PDAP1-204ENST00000496335 NBPF15Q8N660 670 aa19.03■□□□□ 0.64
PDAP1-204ENST00000496335 TSPYL4Q9UJ04 414 aa19.03■□□□□ 0.64
PDAP1-204ENST00000496335 TRIM35Q9UPQ4 493 aa19.03■□□□□ 0.64
PDAP1-204ENST00000496335 LAMB4A4D0S4 1761 aa19.02■□□□□ 0.64
PDAP1-204ENST00000496335 GRIN3BO60391 1043 aa19.02■□□□□ 0.64
PDAP1-204ENST00000496335 DPEP1P16444 411 aa19.02■□□□□ 0.64
PDAP1-204ENST00000496335 SCN7AQ01118 1682 aa19.01■□□□□ 0.63
PDAP1-204ENST00000496335 CAMTA2O94983 1202 aa19.01■□□□□ 0.63
PDAP1-204ENST00000496335 TBC1D9BQ66K14 1250 aa19.01■□□□□ 0.63
PDAP1-204ENST00000496335 DZIP3Q86Y13 1208 aaKnown RBP19.01■□□□□ 0.63
PDAP1-204ENST00000496335 SERPINB2P05120 415 aa19■□□□□ 0.63
PDAP1-204ENST00000496335 APAF1O14727 1248 aa18.99■□□□□ 0.63
PDAP1-204ENST00000496335 ANP32CO43423 234 aa18.99■□□□□ 0.63
PDAP1-204ENST00000496335 NRXN2Q9P2S2 1712 aa18.99■□□□□ 0.63
PDAP1-204ENST00000496335 BCORQ6W2J9 1755 aa18.98■□□□□ 0.63
PDAP1-204ENST00000496335 KCNA3P22001 575 aa18.98■□□□□ 0.63
PDAP1-204ENST00000496335 LAS1LQ9Y4W2 734 aaKnown RBP18.98■□□□□ 0.63
PDAP1-204ENST00000496335 BRCA1P38398 1863 aaKnown RBP18.98■□□□□ 0.63
PDAP1-204ENST00000496335 CHRNA5P30532 468 aa18.97■□□□□ 0.63
PDAP1-204ENST00000496335 NGEFQ8N5V2 710 aa18.97■□□□□ 0.63
PDAP1-204ENST00000496335 BABAM1Q9NWV8 329 aa18.97■□□□□ 0.63
PDAP1-204ENST00000496335 BCS1LQ9Y276 419 aa18.97■□□□□ 0.63
PDAP1-204ENST00000496335 CHL1O00533 1208 aa18.96■□□□□ 0.63
PDAP1-204ENST00000496335 MYL6BP14649 208 aa18.95■□□□□ 0.62
PDAP1-204ENST00000496335 CCDC24Q8N4L8 307 aa18.95■□□□□ 0.62
PDAP1-204ENST00000496335 CARMIL3Q8ND23 1372 aa18.94■□□□□ 0.62
PDAP1-204ENST00000496335 SENP3-EIF4A1A0A087X0R7 540 aa18.94■□□□□ 0.62
PDAP1-204ENST00000496335 KRT24Q2M2I5 525 aa18.94■□□□□ 0.62
PDAP1-204ENST00000496335 ZNF784Q8NCA9 323 aaPredicted RBP18.94■□□□□ 0.62
PDAP1-204ENST00000496335 SETDB2Q96T68 719 aa18.94■□□□□ 0.62
PDAP1-204ENST00000496335 MRS2Q9HD23 443 aa18.94■□□□□ 0.62
PDAP1-204ENST00000496335 PIM2Q9P1W9 311 aa18.94■□□□□ 0.62
PDAP1-204ENST00000496335 EIF2S2P20042 333 aaKnown RBP18.93■□□□□ 0.62
PDAP1-204ENST00000496335 HLFQ16534 295 aa18.93■□□□□ 0.62
PDAP1-204ENST00000496335 ANKRD31Q8N7Z5 1873 aa18.92■□□□□ 0.62
PDAP1-204ENST00000496335 PRR5LQ6MZQ0 368 aa18.92■□□□□ 0.62
PDAP1-204ENST00000496335 CLEC4GQ6UXB4 293 aa18.92■□□□□ 0.62
PDAP1-204ENST00000496335 TTLL7Q6ZT98 887 aa18.92■□□□□ 0.62
PDAP1-204ENST00000496335 NECTIN2Q92692 538 aa18.91■□□□□ 0.62
PDAP1-204ENST00000496335 ZNF652Q9Y2D9 606 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms