RNA–Protein interactions for RNA: ENST00000495653.1

PTPN23-205, Transcript of protein tyrosine phosphatase, non-receptor type 23, humanhuman

TSL 2

Gene PTPN23, Length 676 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23-205ENST00000495653 KLHL34Q8N239 644 aa18.44■□□□□ 0.54
PTPN23-205ENST00000495653 ZBTB1Q9Y2K1 713 aa18.44■□□□□ 0.54
PTPN23-205ENST00000495653 RFC4P35249 363 aa18.43■□□□□ 0.54
PTPN23-205ENST00000495653 SOS1Q07889 1333 aaPredicted RBP18.43■□□□□ 0.54
PTPN23-205ENST00000495653 PRAMEF22A3QJZ6 481 aa18.42■□□□□ 0.54
PTPN23-205ENST00000495653 SYT17Q9BSW7 474 aa18.42■□□□□ 0.54
PTPN23-205ENST00000495653 SRP68Q9UHB9 627 aaKnown RBP18.42■□□□□ 0.54
PTPN23-205ENST00000495653 STARD3NLO95772 234 aa18.41■□□□□ 0.54
PTPN23-205ENST00000495653 CANXP27824 592 aaKnown RBP18.41■□□□□ 0.54
PTPN23-205ENST00000495653 MRS2Q9HD23 443 aa18.41■□□□□ 0.54
PTPN23-205ENST00000495653 GYS1P13807 737 aa18.4■□□□□ 0.54
PTPN23-205ENST00000495653 LMOD3Q0VAK6 560 aa18.4■□□□□ 0.54
PTPN23-205ENST00000495653 TEX13AQ9BXU3 409 aaPredicted RBP18.4■□□□□ 0.54
PTPN23-205ENST00000495653 COL15A1P39059 1388 aa18.4■□□□□ 0.54
PTPN23-205ENST00000495653 PNISRQ8TF01 805 aaKnown RBP18.39■□□□□ 0.53
PTPN23-205ENST00000495653 TRIM35Q9UPQ4 493 aa18.39■□□□□ 0.53
PTPN23-205ENST00000495653 USP16Q9Y5T5 823 aa18.39■□□□□ 0.53
PTPN23-205ENST00000495653 USP42Q9H9J4 1324 aaKnown RBP18.39■□□□□ 0.53
PTPN23-205ENST00000495653 LAMB4A4D0S4 1761 aa18.39■□□□□ 0.53
PTPN23-205ENST00000495653 APAF1O14727 1248 aa18.38■□□□□ 0.53
PTPN23-205ENST00000495653 A1BGP04217 495 aa18.38■□□□□ 0.53
PTPN23-205ENST00000495653 SNRPA1P09661 255 aaKnown RBP18.38■□□□□ 0.53
PTPN23-205ENST00000495653 MMP10P09238 476 aa18.37■□□□□ 0.53
PTPN23-205ENST00000495653 NLGN1Q8N2Q7 840 aa18.37■□□□□ 0.53
PTPN23-205ENST00000495653 PIP4K2AP48426 406 aaPredicted RBP18.36■□□□□ 0.53
PTPN23-205ENST00000495653 EIF5P55010 431 aaKnown RBP18.36■□□□□ 0.53
PTPN23-205ENST00000495653 EIF4A1P60842 406 aaKnown RBP18.36■□□□□ 0.53
PTPN23-205ENST00000495653 USPL1Q5W0Q7 1092 aa18.36■□□□□ 0.53
PTPN23-205ENST00000495653 NLGN2Q8NFZ4 835 aa18.36■□□□□ 0.53
PTPN23-205ENST00000495653 TSPYL4Q9UJ04 414 aa18.36■□□□□ 0.53
PTPN23-205ENST00000495653 ZNF330Q9Y3S2 320 aaPredicted RBP18.36■□□□□ 0.53
PTPN23-205ENST00000495653 FKBP8Q14318 412 aa18.35■□□□□ 0.53
PTPN23-205ENST00000495653 SENP3-EIF4A1A0A087X0R7 540 aa18.34■□□□□ 0.53
PTPN23-205ENST00000495653 ZPR1O75312 459 aa18.34■□□□□ 0.53
PTPN23-205ENST00000495653 NARFQ9UHQ1 456 aa18.34■□□□□ 0.53
PTPN23-205ENST00000495653 SCN7AQ01118 1682 aa18.34■□□□□ 0.53
PTPN23-205ENST00000495653 GIGYF1O75420 1035 aaPredicted RBP18.33■□□□□ 0.52
PTPN23-205ENST00000495653 IL6STP40189 918 aaPredicted RBP18.33■□□□□ 0.52
PTPN23-205ENST00000495653 LAS1LQ9Y4W2 734 aaKnown RBP18.33■□□□□ 0.52
PTPN23-205ENST00000495653 BCL2L12Q9HB09 334 aa18.32■□□□□ 0.52
PTPN23-205ENST00000495653 A0A087WZG4 1122 aa18.31■□□□□ 0.52
PTPN23-205ENST00000495653 NBPF26B4DH59 902 aa18.31■□□□□ 0.52
PTPN23-205ENST00000495653 DDR1Q08345 913 aa18.31■□□□□ 0.52
PTPN23-205ENST00000495653 NBPF10Q6P3W6 841 aaKnown RBP18.31■□□□□ 0.52
PTPN23-205ENST00000495653 NBPF15Q8N660 670 aa18.31■□□□□ 0.52
PTPN23-205ENST00000495653 TBC1D2BQ9UPU7 963 aa18.31■□□□□ 0.52
PTPN23-205ENST00000495653 CD2APQ9Y5K6 639 aa18.31■□□□□ 0.52
PTPN23-205ENST00000495653 PARP3Q9Y6F1 533 aa18.31■□□□□ 0.52
PTPN23-205ENST00000495653 BCORQ6W2J9 1755 aa18.3■□□□□ 0.52
PTPN23-205ENST00000495653 BABAM1Q9NWV8 329 aa18.3■□□□□ 0.52
PTPN23-205ENST00000495653 KIF13BQ9NQT8 1826 aa18.3■□□□□ 0.52
PTPN23-205ENST00000495653 DCAF8L1A6NGE4 600 aa18.29■□□□□ 0.52
PTPN23-205ENST00000495653 CHL1O00533 1208 aa18.29■□□□□ 0.52
PTPN23-205ENST00000495653 NPM2Q86SE8 214 aaKnown RBP18.29■□□□□ 0.52
PTPN23-205ENST00000495653 AFDNP55196 1824 aaKnown RBP18.28■□□□□ 0.52
PTPN23-205ENST00000495653 TM4SF1P30408 202 aa18.28■□□□□ 0.52
PTPN23-205ENST00000495653 NFIXQ14938 502 aa18.28■□□□□ 0.52
PTPN23-205ENST00000495653 C10orf71Q711Q0 1435 aa18.28■□□□□ 0.52
PTPN23-205ENST00000495653 KIAA1551Q9HCM1 1747 aa18.28■□□□□ 0.52
PTPN23-205ENST00000495653 POLRMTO00411 1230 aaKnown RBP18.27■□□□□ 0.52
PTPN23-205ENST00000495653 KRT24Q2M2I5 525 aa18.27■□□□□ 0.52
PTPN23-205ENST00000495653 DZIP3Q86Y13 1208 aaKnown RBP18.27■□□□□ 0.52
PTPN23-205ENST00000495653 PELP1Q8IZL8 1130 aaKnown RBP18.27■□□□□ 0.52
PTPN23-205ENST00000495653 FAM9BQ8IZU0 186 aa18.27■□□□□ 0.52
PTPN23-205ENST00000495653 N4BP2Q86UW6 1770 aaPredicted RBP18.27■□□□□ 0.51
PTPN23-205ENST00000495653 CAMTA2O94983 1202 aa18.26■□□□□ 0.51
PTPN23-205ENST00000495653 BICDL1Q6ZP65 573 aa18.26■□□□□ 0.51
PTPN23-205ENST00000495653 CFAP44Q96MT7 982 aa18.26■□□□□ 0.51
PTPN23-205ENST00000495653 GPR162Q16538 588 aa18.25■□□□□ 0.51
PTPN23-205ENST00000495653 TBC1D9BQ66K14 1250 aa18.25■□□□□ 0.51
PTPN23-205ENST00000495653 MBIPQ9NS73 344 aa18.25■□□□□ 0.51
PTPN23-205ENST00000495653 NRXN2Q9P2S2 1712 aa18.25■□□□□ 0.51
PTPN23-205ENST00000495653 ZNF853P0CG23 659 aa18.24■□□□□ 0.51
PTPN23-205ENST00000495653 MYL6BP14649 208 aa18.24■□□□□ 0.51
PTPN23-205ENST00000495653 EIF2S2P20042 333 aaKnown RBP18.24■□□□□ 0.51
PTPN23-205ENST00000495653 NGEFQ8N5V2 710 aa18.24■□□□□ 0.51
PTPN23-205ENST00000495653 WWC3Q9ULE0 1092 aa18.24■□□□□ 0.51
PTPN23-205ENST00000495653 PXDNLA1KZ92 1463 aa18.24■□□□□ 0.51
PTPN23-205ENST00000495653 CALD1Q05682 793 aaKnown RBP18.23■□□□□ 0.51
PTPN23-205ENST00000495653 NECTIN2Q92692 538 aa18.23■□□□□ 0.51
PTPN23-205ENST00000495653 IFT57Q9NWB7 429 aa18.23■□□□□ 0.51
PTPN23-205ENST00000495653 SERPINB2P05120 415 aa18.22■□□□□ 0.51
PTPN23-205ENST00000495653 YBX3P16989 372 aaKnown RBP eCLIP18.22■□□□□ 0.51
PTPN23-205ENST00000495653 ANXA1P04083 346 aa18.21■□□□□ 0.51
PTPN23-205ENST00000495653 GNAI1P63096 354 aa18.21■□□□□ 0.51
PTPN23-205ENST00000495653 CCDC27Q2M243 656 aa18.21■□□□□ 0.51
PTPN23-205ENST00000495653 WWC1Q8IX03 1113 aa18.21■□□□□ 0.51
PTPN23-205ENST00000495653 SALL2Q9Y467 1007 aaPredicted RBP18.21■□□□□ 0.51
PTPN23-205ENST00000495653 ERBB4Q15303 1308 aa18.21■□□□□ 0.51
PTPN23-205ENST00000495653 A0A0G2JLW4 131 aa18.2■□□□□ 0.5
PTPN23-205ENST00000495653 PDIA6Q15084 440 aa18.2■□□□□ 0.5
PTPN23-205ENST00000495653 PROSER3Q2NL68 480 aa18.2■□□□□ 0.5
PTPN23-205ENST00000495653 TTLL7Q6ZT98 887 aa18.2■□□□□ 0.5
PTPN23-205ENST00000495653 CARMIL3Q8ND23 1372 aa18.19■□□□□ 0.5
PTPN23-205ENST00000495653 NUP98P52948 1817 aa18.19■□□□□ 0.5
PTPN23-205ENST00000495653 DPEP1P16444 411 aa18.19■□□□□ 0.5
PTPN23-205ENST00000495653 BRCA1P38398 1863 aaKnown RBP18.19■□□□□ 0.5
PTPN23-205ENST00000495653 TGFB2P61812 414 aa18.19■□□□□ 0.5
PTPN23-205ENST00000495653 HLFQ16534 295 aa18.19■□□□□ 0.5
PTPN23-205ENST00000495653 DUSP27Q5VZP5 1158 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms