RNA–Protein interactions for RNA: ENST00000495553.1

ACTN4-207, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-207ENST00000495553 CRKLP46109 303 aaKnown RBP12.21□□□□□ -0.45
ACTN4-207ENST00000495553 ZNF428Q96B54 188 aa12.21□□□□□ -0.45
ACTN4-207ENST00000495553 PDGFDQ9GZP0 370 aaPredicted RBP12.21□□□□□ -0.45
ACTN4-207ENST00000495553 ADAMTS7Q9UKP4 1686 aa12.21□□□□□ -0.45
ACTN4-207ENST00000495553 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.2□□□□□ -0.46
ACTN4-207ENST00000495553 CYP19A1P11511 503 aaPredicted RBP12.2□□□□□ -0.46
ACTN4-207ENST00000495553 SPON1Q9HCB6 807 aa12.2□□□□□ -0.46
ACTN4-207ENST00000495553 SPINK5Q9NQ38 1064 aaPredicted RBP12.2□□□□□ -0.46
ACTN4-207ENST00000495553 CCDC87Q9NVE4 849 aa12.2□□□□□ -0.46
ACTN4-207ENST00000495553 VIRMAQ69YN4 1812 aaKnown RBP12.2□□□□□ -0.46
ACTN4-207ENST00000495553 LY75O60449 1722 aa12.2□□□□□ -0.46
ACTN4-207ENST00000495553 RPS6KA4O75676 772 aa12.19□□□□□ -0.46
ACTN4-207ENST00000495553 EXOSC9Q06265 439 aaKnown RBP12.19□□□□□ -0.46
ACTN4-207ENST00000495553 TRAPPC3LQ5T215 181 aa12.19□□□□□ -0.46
ACTN4-207ENST00000495553 COL23A1Q86Y22 540 aaPredicted RBP12.19□□□□□ -0.46
ACTN4-207ENST00000495553 SLC16A10Q8TF71 515 aa12.19□□□□□ -0.46
ACTN4-207ENST00000495553 MTFR1LQ9H019 292 aa12.19□□□□□ -0.46
ACTN4-207ENST00000495553 ATF5Q9Y2D1 282 aaPredicted RBP12.19□□□□□ -0.46
ACTN4-207ENST00000495553 PAPPAQ13219 1627 aa12.19□□□□□ -0.46
ACTN4-207ENST00000495553 KCPQ6ZWJ8 1503 aa12.18□□□□□ -0.46
ACTN4-207ENST00000495553 HOXB7P09629 217 aa12.18□□□□□ -0.46
ACTN4-207ENST00000495553 ADRA2BP18089 450 aa12.18□□□□□ -0.46
ACTN4-207ENST00000495553 RFC4P35249 363 aa12.18□□□□□ -0.46
ACTN4-207ENST00000495553 EIF4A1P60842 406 aaKnown RBP12.18□□□□□ -0.46
ACTN4-207ENST00000495553 TWISTNBQ3B726 338 aaPredicted RBP12.18□□□□□ -0.46
ACTN4-207ENST00000495553 INTS5Q6P9B9 1019 aaKnown RBP12.18□□□□□ -0.46
ACTN4-207ENST00000495553 SMIM5Q71RC9 77 aa12.18□□□□□ -0.46
ACTN4-207ENST00000495553 NPM2Q86SE8 214 aaKnown RBP12.18□□□□□ -0.46
ACTN4-207ENST00000495553 RCAN3Q9UKA8 241 aa12.18□□□□□ -0.46
ACTN4-207ENST00000495553 CANXP27824 592 aaKnown RBP12.17□□□□□ -0.46
ACTN4-207ENST00000495553 AMIGO3Q86WK7 504 aa12.17□□□□□ -0.46
ACTN4-207ENST00000495553 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.17□□□□□ -0.46
ACTN4-207ENST00000495553 PPP1R1BQ9UD71 204 aaPredicted RBP12.17□□□□□ -0.46
ACTN4-207ENST00000495553 SIPA1L3O60292 1781 aaPredicted RBP12.16□□□□□ -0.46
ACTN4-207ENST00000495553 PRAMEF22A3QJZ6 481 aa12.16□□□□□ -0.46
ACTN4-207ENST00000495553 GIGYF1O75420 1035 aaPredicted RBP12.16□□□□□ -0.46
ACTN4-207ENST00000495553 POLD1P28340 1107 aa12.16□□□□□ -0.46
ACTN4-207ENST00000495553 CCDC30Q5VVM6 783 aa12.16□□□□□ -0.46
ACTN4-207ENST00000495553 ARHGEF1Q92888 912 aaKnown RBP12.16□□□□□ -0.46
ACTN4-207ENST00000495553 STK31Q9BXU1 1019 aa12.16□□□□□ -0.46
ACTN4-207ENST00000495553 ZBTB1Q9Y2K1 713 aa12.16□□□□□ -0.46
ACTN4-207ENST00000495553 ZNF330Q9Y3S2 320 aaPredicted RBP12.16□□□□□ -0.46
ACTN4-207ENST00000495553 USP16Q9Y5T5 823 aa12.16□□□□□ -0.46
ACTN4-207ENST00000495553 C4BP0C0L5 1744 aa12.15□□□□□ -0.46
ACTN4-207ENST00000495553 ELL2O00472 640 aaPredicted RBP12.15□□□□□ -0.46
ACTN4-207ENST00000495553 A1BGP04217 495 aa12.15□□□□□ -0.46
ACTN4-207ENST00000495553 ARXQ96QS3 562 aa12.15□□□□□ -0.46
ACTN4-207ENST00000495553 C5P01031 1676 aa12.15□□□□□ -0.46
ACTN4-207ENST00000495553 KDM3BQ7LBC6 1761 aa12.15□□□□□ -0.46
ACTN4-207ENST00000495553 ZPR1O75312 459 aa12.14□□□□□ -0.47
ACTN4-207ENST00000495553 ALDH1L2Q3SY69 923 aa12.14□□□□□ -0.47
ACTN4-207ENST00000495553 HDGFL1Q5TGJ6 251 aa12.14□□□□□ -0.47
ACTN4-207ENST00000495553 MSL1Q68DK7 614 aa12.14□□□□□ -0.47
ACTN4-207ENST00000495553 C8orf58Q8NAV2 365 aa12.14□□□□□ -0.47
ACTN4-207ENST00000495553 A0A087WZG4 1122 aa12.13□□□□□ -0.47
ACTN4-207ENST00000495553 IPO8O15397 1037 aaKnown RBP12.13□□□□□ -0.47
ACTN4-207ENST00000495553 EIF2S2P20042 333 aaKnown RBP12.13□□□□□ -0.47
ACTN4-207ENST00000495553 IL6STP40189 918 aaPredicted RBP12.13□□□□□ -0.47
ACTN4-207ENST00000495553 SMC4Q9NTJ3 1288 aa12.13□□□□□ -0.47
ACTN4-207ENST00000495553 ZNF831Q5JPB2 1677 aa12.13□□□□□ -0.47
ACTN4-207ENST00000495553 KIF16BQ96L93 1317 aa12.12□□□□□ -0.47
ACTN4-207ENST00000495553 VAMP4O75379 141 aa12.12□□□□□ -0.47
ACTN4-207ENST00000495553 NEFLP07196 543 aa12.12□□□□□ -0.47
ACTN4-207ENST00000495553 PTGER2P43116 358 aa12.12□□□□□ -0.47
ACTN4-207ENST00000495553 EIF5P55010 431 aaKnown RBP12.12□□□□□ -0.47
ACTN4-207ENST00000495553 NLGN1Q8N2Q7 840 aa12.12□□□□□ -0.47
ACTN4-207ENST00000495553 COL15A1P39059 1388 aa12.11□□□□□ -0.47
ACTN4-207ENST00000495553 MS4A1P11836 297 aa12.11□□□□□ -0.47
ACTN4-207ENST00000495553 PIP4K2AP48426 406 aaPredicted RBP12.11□□□□□ -0.47
ACTN4-207ENST00000495553 RARSP54136 660 aaKnown RBP12.11□□□□□ -0.47
ACTN4-207ENST00000495553 KRT24Q2M2I5 525 aa12.11□□□□□ -0.47
ACTN4-207ENST00000495553 TSPYL6Q8N831 410 aa12.11□□□□□ -0.47
ACTN4-207ENST00000495553 DBF4Q9UBU7 674 aaPredicted RBP12.11□□□□□ -0.47
ACTN4-207ENST00000495553 SRP68Q9UHB9 627 aaKnown RBP12.11□□□□□ -0.47
ACTN4-207ENST00000495553 USP42Q9H9J4 1324 aaKnown RBP12.11□□□□□ -0.47
ACTN4-207ENST00000495553 GYS1P13807 737 aa12.1□□□□□ -0.47
ACTN4-207ENST00000495553 USPL1Q5W0Q7 1092 aa12.1□□□□□ -0.47
ACTN4-207ENST00000495553 NECTIN2Q92692 538 aa12.1□□□□□ -0.47
ACTN4-207ENST00000495553 SGIP1Q9BQI5 828 aa12.1□□□□□ -0.47
ACTN4-207ENST00000495553 NARFQ9UHQ1 456 aa12.1□□□□□ -0.47
ACTN4-207ENST00000495553 TBC1D2BQ9UPU7 963 aa12.1□□□□□ -0.47
ACTN4-207ENST00000495553 UBR2Q8IWV8 1755 aa12.1□□□□□ -0.47
ACTN4-207ENST00000495553 ERBB4Q15303 1308 aa12.1□□□□□ -0.47
ACTN4-207ENST00000495553 TAF1LQ8IZX4 1826 aa12.09□□□□□ -0.47
ACTN4-207ENST00000495553 TJP1Q07157 1748 aa12.09□□□□□ -0.47
ACTN4-207ENST00000495553 NBPF26B4DH59 902 aa12.09□□□□□ -0.47
ACTN4-207ENST00000495553 MYL6BP14649 208 aa12.09□□□□□ -0.47
ACTN4-207ENST00000495553 NBPF10Q6P3W6 841 aaKnown RBP12.09□□□□□ -0.47
ACTN4-207ENST00000495553 DZIP3Q86Y13 1208 aaKnown RBP12.09□□□□□ -0.47
ACTN4-207ENST00000495553 NBPF15Q8N660 670 aa12.09□□□□□ -0.47
ACTN4-207ENST00000495553 SSH1Q8WYL5 1049 aa12.09□□□□□ -0.47
ACTN4-207ENST00000495553 HYPKQ9NX55 129 aa12.09□□□□□ -0.47
ACTN4-207ENST00000495553 CASZ1Q86V15 1759 aa12.08□□□□□ -0.48
ACTN4-207ENST00000495553 SLC4A2P04920 1241 aa12.08□□□□□ -0.48
ACTN4-207ENST00000495553 MMP10P09238 476 aa12.08□□□□□ -0.48
ACTN4-207ENST00000495553 FKBP8Q14318 412 aa12.08□□□□□ -0.48
ACTN4-207ENST00000495553 KLHL34Q8N239 644 aa12.08□□□□□ -0.48
ACTN4-207ENST00000495553 FRAT1Q92837 279 aaPredicted RBP12.08□□□□□ -0.48
ACTN4-207ENST00000495553 SUPT16HQ9Y5B9 1047 aaKnown RBP12.08□□□□□ -0.48
ACTN4-207ENST00000495553 PARP3Q9Y6F1 533 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms