RNA–Protein interactions for RNA: ENST00000495363.5

SMIM11A-207, Transcript of small integral membrane protein 11A, humanhuman

TSL 5

Gene SMIM11A, Length 1,029 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-207ENST00000495363 PELP1Q8IZL8 1130 aaKnown RBP16.16■□□□□ 0.18
SMIM11A-207ENST00000495363 MMP10P09238 476 aa16.15■□□□□ 0.18
SMIM11A-207ENST00000495363 NLGN2Q8NFZ4 835 aa16.15■□□□□ 0.18
SMIM11A-207ENST00000495363 UBR2Q8IWV8 1755 aa16.15■□□□□ 0.18
SMIM11A-207ENST00000495363 COL24A1Q17RW2 1714 aa16.14■□□□□ 0.17
SMIM11A-207ENST00000495363 DLG5Q8TDM6 1919 aa16.14■□□□□ 0.17
SMIM11A-207ENST00000495363 GYS1P13807 737 aa16.14■□□□□ 0.17
SMIM11A-207ENST00000495363 TMPOP42166 694 aaKnown RBP16.14■□□□□ 0.17
SMIM11A-207ENST00000495363 NLGN1Q8N2Q7 840 aa16.14■□□□□ 0.17
SMIM11A-207ENST00000495363 RUNDC1Q96C34 613 aa16.14■□□□□ 0.17
SMIM11A-207ENST00000495363 TEX13AQ9BXU3 409 aaPredicted RBP16.14■□□□□ 0.17
SMIM11A-207ENST00000495363 SOS1Q07889 1333 aaPredicted RBP16.14■□□□□ 0.17
SMIM11A-207ENST00000495363 CICQ96RK0 1608 aaPredicted RBP16.13■□□□□ 0.17
SMIM11A-207ENST00000495363 PRAMEF22A3QJZ6 481 aa16.13■□□□□ 0.17
SMIM11A-207ENST00000495363 ZPR1O75312 459 aa16.13■□□□□ 0.17
SMIM11A-207ENST00000495363 USP42Q9H9J4 1324 aaKnown RBP16.13■□□□□ 0.17
SMIM11A-207ENST00000495363 COL15A1P39059 1388 aa16.13■□□□□ 0.17
SMIM11A-207ENST00000495363 A1BGP04217 495 aa16.12■□□□□ 0.17
SMIM11A-207ENST00000495363 FKBP8Q14318 412 aa16.12■□□□□ 0.17
SMIM11A-207ENST00000495363 CCDC184Q52MB2 194 aa16.12■□□□□ 0.17
SMIM11A-207ENST00000495363 USPL1Q5W0Q7 1092 aa16.12■□□□□ 0.17
SMIM11A-207ENST00000495363 NPM2Q86SE8 214 aaKnown RBP16.12■□□□□ 0.17
SMIM11A-207ENST00000495363 PNISRQ8TF01 805 aaKnown RBP16.12■□□□□ 0.17
SMIM11A-207ENST00000495363 USP16Q9Y5T5 823 aa16.12■□□□□ 0.17
SMIM11A-207ENST00000495363 SNRPA1P09661 255 aaKnown RBP16.11■□□□□ 0.17
SMIM11A-207ENST00000495363 PIP4K2AP48426 406 aaPredicted RBP16.11■□□□□ 0.17
SMIM11A-207ENST00000495363 LMOD3Q0VAK6 560 aa16.11■□□□□ 0.17
SMIM11A-207ENST00000495363 GPR162Q16538 588 aa16.11■□□□□ 0.17
SMIM11A-207ENST00000495363 PARP3Q9Y6F1 533 aa16.11■□□□□ 0.17
SMIM11A-207ENST00000495363 C4AP0C0L4 1744 aa16.11■□□□□ 0.17
SMIM11A-207ENST00000495363 TSPYL4Q9UJ04 414 aa16.1■□□□□ 0.17
SMIM11A-207ENST00000495363 WWC3Q9ULE0 1092 aa16.1■□□□□ 0.17
SMIM11A-207ENST00000495363 CD2APQ9Y5K6 639 aa16.1■□□□□ 0.17
SMIM11A-207ENST00000495363 MRS2Q9HD23 443 aa16.09■□□□□ 0.17
SMIM11A-207ENST00000495363 NARFQ9UHQ1 456 aa16.09■□□□□ 0.17
SMIM11A-207ENST00000495363 LAS1LQ9Y4W2 734 aaKnown RBP16.09■□□□□ 0.17
SMIM11A-207ENST00000495363 A0A087WZG4 1122 aa16.08■□□□□ 0.16
SMIM11A-207ENST00000495363 EIF5P55010 431 aaKnown RBP16.08■□□□□ 0.16
SMIM11A-207ENST00000495363 TBC1D2BQ9UPU7 963 aa16.08■□□□□ 0.16
SMIM11A-207ENST00000495363 SENP3-EIF4A1A0A087X0R7 540 aa16.07■□□□□ 0.16
SMIM11A-207ENST00000495363 APAF1O14727 1248 aa16.07■□□□□ 0.16
SMIM11A-207ENST00000495363 IL6STP40189 918 aaPredicted RBP16.07■□□□□ 0.16
SMIM11A-207ENST00000495363 EIF4A1P60842 406 aaKnown RBP16.07■□□□□ 0.16
SMIM11A-207ENST00000495363 BICDL1Q6ZP65 573 aa16.07■□□□□ 0.16
SMIM11A-207ENST00000495363 DDR1Q08345 913 aa16.06■□□□□ 0.16
SMIM11A-207ENST00000495363 TRIM35Q9UPQ4 493 aa16.06■□□□□ 0.16
SMIM11A-207ENST00000495363 BCL2L12Q9HB09 334 aa16.05■□□□□ 0.16
SMIM11A-207ENST00000495363 GIGYF1O75420 1035 aaPredicted RBP16.04■□□□□ 0.16
SMIM11A-207ENST00000495363 NFIXQ14938 502 aa16.04■□□□□ 0.16
SMIM11A-207ENST00000495363 DZIP3Q86Y13 1208 aaKnown RBP16.04■□□□□ 0.16
SMIM11A-207ENST00000495363 NGEFQ8N5V2 710 aa16.04■□□□□ 0.16
SMIM11A-207ENST00000495363 KDM3BQ7LBC6 1761 aa16.03■□□□□ 0.16
SMIM11A-207ENST00000495363 POLRMTO00411 1230 aaKnown RBP16.03■□□□□ 0.16
SMIM11A-207ENST00000495363 YY1P25490 414 aa16.03■□□□□ 0.16
SMIM11A-207ENST00000495363 TM4SF1P30408 202 aa16.03■□□□□ 0.16
SMIM11A-207ENST00000495363 NBPF26B4DH59 902 aa16.02■□□□□ 0.16
SMIM11A-207ENST00000495363 YBX3P16989 372 aaKnown RBP eCLIP16.02■□□□□ 0.16
SMIM11A-207ENST00000495363 EIF2S2P20042 333 aaKnown RBP16.02■□□□□ 0.16
SMIM11A-207ENST00000495363 NBPF10Q6P3W6 841 aaKnown RBP16.02■□□□□ 0.16
SMIM11A-207ENST00000495363 NBPF15Q8N660 670 aa16.02■□□□□ 0.16
SMIM11A-207ENST00000495363 A0A0G2JLW4 131 aa16.01■□□□□ 0.15
SMIM11A-207ENST00000495363 MYL6BP14649 208 aa16.01■□□□□ 0.15
SMIM11A-207ENST00000495363 TBC1D9BQ66K14 1250 aa16.01■□□□□ 0.15
SMIM11A-207ENST00000495363 C10orf71Q711Q0 1435 aa16.01■□□□□ 0.15
SMIM11A-207ENST00000495363 UTRNP46939 3433 aa16■□□□□ 0.15
SMIM11A-207ENST00000495363 CAMTA2O94983 1202 aa16■□□□□ 0.15
SMIM11A-207ENST00000495363 SERPINB2P05120 415 aa16■□□□□ 0.15
SMIM11A-207ENST00000495363 DPEP1P16444 411 aa16■□□□□ 0.15
SMIM11A-207ENST00000495363 NECTIN2Q92692 538 aa16■□□□□ 0.15
SMIM11A-207ENST00000495363 BABAM1Q9NWV8 329 aa16■□□□□ 0.15
SMIM11A-207ENST00000495363 CHL1O00533 1208 aa15.99■□□□□ 0.15
SMIM11A-207ENST00000495363 NPHP1O15259 732 aa15.99■□□□□ 0.15
SMIM11A-207ENST00000495363 TGFB2P61812 414 aa15.99■□□□□ 0.15
SMIM11A-207ENST00000495363 KRT24Q2M2I5 525 aa15.99■□□□□ 0.15
SMIM11A-207ENST00000495363 PXDNLA1KZ92 1463 aa15.98■□□□□ 0.15
SMIM11A-207ENST00000495363 GRIN3BO60391 1043 aa15.98■□□□□ 0.15
SMIM11A-207ENST00000495363 FAM9BQ8IZU0 186 aa15.98■□□□□ 0.15
SMIM11A-207ENST00000495363 CCDC24Q8N4L8 307 aa15.98■□□□□ 0.15
SMIM11A-207ENST00000495363 LAMB4A4D0S4 1761 aa15.98■□□□□ 0.15
SMIM11A-207ENST00000495363 CHRNA5P30532 468 aa15.97■□□□□ 0.15
SMIM11A-207ENST00000495363 CFAP44Q96MT7 982 aa15.97■□□□□ 0.15
SMIM11A-207ENST00000495363 SETDB2Q96T68 719 aa15.97■□□□□ 0.15
SMIM11A-207ENST00000495363 BCS1LQ9Y276 419 aa15.97■□□□□ 0.15
SMIM11A-207ENST00000495363 ZNF652Q9Y2D9 606 aa15.97■□□□□ 0.15
SMIM11A-207ENST00000495363 SALL2Q9Y467 1007 aaPredicted RBP15.97■□□□□ 0.15
SMIM11A-207ENST00000495363 SCN7AQ01118 1682 aa15.96■□□□□ 0.15
SMIM11A-207ENST00000495363 N4BP2Q86UW6 1770 aaPredicted RBP15.96■□□□□ 0.15
SMIM11A-207ENST00000495363 ANXA1P04083 346 aa15.96■□□□□ 0.15
SMIM11A-207ENST00000495363 KIF6Q6ZMV9 814 aa15.96■□□□□ 0.15
SMIM11A-207ENST00000495363 MBIPQ9NS73 344 aa15.96■□□□□ 0.15
SMIM11A-207ENST00000495363 GOLGB1Q14789 3259 aaKnown RBP15.95■□□□□ 0.14
SMIM11A-207ENST00000495363 FAM177BA6PVY3 158 aa15.95■□□□□ 0.14
SMIM11A-207ENST00000495363 CALD1Q05682 793 aaKnown RBP15.95■□□□□ 0.14
SMIM11A-207ENST00000495363 TTLL7Q6ZT98 887 aa15.95■□□□□ 0.14
SMIM11A-207ENST00000495363 CARMIL3Q8ND23 1372 aa15.95■□□□□ 0.14
SMIM11A-207ENST00000495363 GNAI1P63096 354 aa15.94■□□□□ 0.14
SMIM11A-207ENST00000495363 HLFQ16534 295 aa15.94■□□□□ 0.14
SMIM11A-207ENST00000495363 ZBTB3Q9H5J0 574 aa15.94■□□□□ 0.14
SMIM11A-207ENST00000495363 PIM2Q9P1W9 311 aa15.94■□□□□ 0.14
SMIM11A-207ENST00000495363 NIP7Q9Y221 180 aaKnown RBP eCLIP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms