RNA–Protein interactions for RNA: ENST00000495176.5

CYTH3-211, Transcript of cytohesin 3, humanhuman

TSL 4

Gene CYTH3, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-211ENST00000495176 YBX3P16989 372 aaKnown RBP eCLIP24■■□□□ 1.43
CYTH3-211ENST00000495176 DLG5Q8TDM6 1919 aa24■■□□□ 1.43
CYTH3-211ENST00000495176 USPL1Q5W0Q7 1092 aa23.99■■□□□ 1.43
CYTH3-211ENST00000495176 SOS1Q07889 1333 aaPredicted RBP23.99■■□□□ 1.43
CYTH3-211ENST00000495176 USP42Q9H9J4 1324 aaKnown RBP23.99■■□□□ 1.43
CYTH3-211ENST00000495176 MAPK8IP3Q9UPT6 1336 aa23.99■■□□□ 1.43
CYTH3-211ENST00000495176 TEX13AQ9BXU3 409 aaPredicted RBP23.98■■□□□ 1.43
CYTH3-211ENST00000495176 MIS18AQ9NYP9 233 aa23.98■■□□□ 1.43
CYTH3-211ENST00000495176 MYBBP1AQ9BQG0 1328 aaKnown RBP23.98■■□□□ 1.43
CYTH3-211ENST00000495176 HEG1Q9ULI3 1381 aa23.98■■□□□ 1.43
CYTH3-211ENST00000495176 GOLGB1Q14789 3259 aaKnown RBP23.98■■□□□ 1.43
CYTH3-211ENST00000495176 HTATSF1O43719 755 aaKnown RBP23.97■■□□□ 1.43
CYTH3-211ENST00000495176 GRIN3BO60391 1043 aa23.97■■□□□ 1.43
CYTH3-211ENST00000495176 PLEKHF1Q96S99 279 aa23.97■■□□□ 1.43
CYTH3-211ENST00000495176 NFE2L2Q16236 605 aa23.95■■□□□ 1.42
CYTH3-211ENST00000495176 COL15A1P39059 1388 aa23.94■■□□□ 1.42
CYTH3-211ENST00000495176 A1BGP04217 495 aa23.94■■□□□ 1.42
CYTH3-211ENST00000495176 TAF7Q15545 349 aaPredicted RBP23.94■■□□□ 1.42
CYTH3-211ENST00000495176 THUMPD2Q9BTF0 503 aaKnown RBP23.94■■□□□ 1.42
CYTH3-211ENST00000495176 A0A0G2JLW4 131 aa23.93■■□□□ 1.42
CYTH3-211ENST00000495176 PRAMEF22A3QJZ6 481 aa23.93■■□□□ 1.42
CYTH3-211ENST00000495176 NPM2Q86SE8 214 aaKnown RBP23.93■■□□□ 1.42
CYTH3-211ENST00000495176 NARFQ9UHQ1 456 aa23.93■■□□□ 1.42
CYTH3-211ENST00000495176 KIF13BQ9NQT8 1826 aa23.93■■□□□ 1.42
CYTH3-211ENST00000495176 PIP4K2AP48426 406 aaPredicted RBP23.92■■□□□ 1.42
CYTH3-211ENST00000495176 DDR1Q08345 913 aa23.92■■□□□ 1.42
CYTH3-211ENST00000495176 CCDC146Q8IYE0 955 aa23.92■■□□□ 1.42
CYTH3-211ENST00000495176 USP16Q9Y5T5 823 aa23.92■■□□□ 1.42
CYTH3-211ENST00000495176 BICDL1Q6ZP65 573 aa23.91■■□□□ 1.42
CYTH3-211ENST00000495176 TBC1D2BQ9UPU7 963 aa23.91■■□□□ 1.42
CYTH3-211ENST00000495176 SNRPA1P09661 255 aaKnown RBP23.9■■□□□ 1.42
CYTH3-211ENST00000495176 EIF5P55010 431 aaKnown RBP23.9■■□□□ 1.42
CYTH3-211ENST00000495176 WDR43Q15061 677 aaKnown RBP eCLIP23.9■■□□□ 1.42
CYTH3-211ENST00000495176 N4BP2Q86UW6 1770 aaPredicted RBP23.9■■□□□ 1.42
CYTH3-211ENST00000495176 A0A087WZG4 1122 aa23.89■■□□□ 1.41
CYTH3-211ENST00000495176 DPEP1P16444 411 aa23.89■■□□□ 1.41
CYTH3-211ENST00000495176 RIPK4P57078 832 aa23.89■■□□□ 1.41
CYTH3-211ENST00000495176 TGFB2P61812 414 aa23.89■■□□□ 1.41
CYTH3-211ENST00000495176 NEUROD2Q15784 382 aa23.89■■□□□ 1.41
CYTH3-211ENST00000495176 PRKRIP1Q9H875 184 aaPredicted RBP23.89■■□□□ 1.41
CYTH3-211ENST00000495176 TM4SF1P30408 202 aa23.88■■□□□ 1.41
CYTH3-211ENST00000495176 NFIXQ14938 502 aa23.88■■□□□ 1.41
CYTH3-211ENST00000495176 RRP7AQ9Y3A4 280 aaKnown RBP23.88■■□□□ 1.41
CYTH3-211ENST00000495176 POLRMTO00411 1230 aaKnown RBP23.87■■□□□ 1.41
CYTH3-211ENST00000495176 ZNF784Q8NCA9 323 aaPredicted RBP23.87■■□□□ 1.41
CYTH3-211ENST00000495176 BCL2L12Q9HB09 334 aa23.87■■□□□ 1.41
CYTH3-211ENST00000495176 BCS1LQ9Y276 419 aa23.87■■□□□ 1.41
CYTH3-211ENST00000495176 IL6STP40189 918 aaPredicted RBP23.86■■□□□ 1.41
CYTH3-211ENST00000495176 PNISRQ8TF01 805 aaKnown RBP23.85■■□□□ 1.41
CYTH3-211ENST00000495176 C10orf71Q711Q0 1435 aa23.84■■□□□ 1.41
CYTH3-211ENST00000495176 PXDNLA1KZ92 1463 aa23.84■■□□□ 1.41
CYTH3-211ENST00000495176 ADAMTS8Q9UP79 889 aa23.84■■□□□ 1.41
CYTH3-211ENST00000495176 AFDNP55196 1824 aaKnown RBP23.84■■□□□ 1.41
CYTH3-211ENST00000495176 SERPINB2P05120 415 aa23.83■■□□□ 1.41
CYTH3-211ENST00000495176 CHRNA5P30532 468 aa23.83■■□□□ 1.41
CYTH3-211ENST00000495176 TMPOP42166 694 aaKnown RBP23.83■■□□□ 1.41
CYTH3-211ENST00000495176 TBC1D9BQ66K14 1250 aa23.82■■□□□ 1.4
CYTH3-211ENST00000495176 DZIP3Q86Y13 1208 aaKnown RBP23.82■■□□□ 1.4
CYTH3-211ENST00000495176 NGEFQ8N5V2 710 aa23.81■■□□□ 1.4
CYTH3-211ENST00000495176 KIAA1551Q9HCM1 1747 aa23.81■■□□□ 1.4
CYTH3-211ENST00000495176 TSPYL4Q9UJ04 414 aa23.8■■□□□ 1.4
CYTH3-211ENST00000495176 KDM3BQ7LBC6 1761 aa23.79■■□□□ 1.4
CYTH3-211ENST00000495176 ZNF316A6NFI3 1004 aaPredicted RBP23.79■■□□□ 1.4
CYTH3-211ENST00000495176 EIF4A1P60842 406 aaKnown RBP23.79■■□□□ 1.4
CYTH3-211ENST00000495176 ARHGAP27Q6ZUM4 889 aa23.79■■□□□ 1.4
CYTH3-211ENST00000495176 CCDC24Q8N4L8 307 aa23.79■■□□□ 1.4
CYTH3-211ENST00000495176 RUNDC1Q96C34 613 aa23.79■■□□□ 1.4
CYTH3-211ENST00000495176 BRCA1P38398 1863 aaKnown RBP23.79■■□□□ 1.4
CYTH3-211ENST00000495176 NBPF26B4DH59 902 aa23.78■■□□□ 1.4
CYTH3-211ENST00000495176 NPHP1O15259 732 aa23.78■■□□□ 1.4
CYTH3-211ENST00000495176 CAMTA2O94983 1202 aa23.78■■□□□ 1.4
CYTH3-211ENST00000495176 KCNA3P22001 575 aa23.78■■□□□ 1.4
CYTH3-211ENST00000495176 LMOD3Q0VAK6 560 aa23.78■■□□□ 1.4
CYTH3-211ENST00000495176 NBPF10Q6P3W6 841 aaKnown RBP23.78■■□□□ 1.4
CYTH3-211ENST00000495176 NBPF15Q8N660 670 aa23.78■■□□□ 1.4
CYTH3-211ENST00000495176 PIM2Q9P1W9 311 aa23.78■■□□□ 1.4
CYTH3-211ENST00000495176 LAS1LQ9Y4W2 734 aaKnown RBP23.78■■□□□ 1.4
CYTH3-211ENST00000495176 GIGYF1O75420 1035 aaPredicted RBP23.77■■□□□ 1.4
CYTH3-211ENST00000495176 DALRD3Q5D0E6 543 aaKnown RBP23.76■■□□□ 1.39
CYTH3-211ENST00000495176 SETDB2Q96T68 719 aa23.76■■□□□ 1.39
CYTH3-211ENST00000495176 SCN7AQ01118 1682 aa23.75■■□□□ 1.39
CYTH3-211ENST00000495176 LAMB4A4D0S4 1761 aa23.75■■□□□ 1.39
CYTH3-211ENST00000495176 NRXN2Q9P2S2 1712 aa23.74■■□□□ 1.39
CYTH3-211ENST00000495176 MYL6BP14649 208 aa23.74■■□□□ 1.39
CYTH3-211ENST00000495176 ARFGEF1Q9Y6D6 1849 aa23.74■■□□□ 1.39
CYTH3-211ENST00000495176 EIF2S2P20042 333 aaKnown RBP23.73■■□□□ 1.39
CYTH3-211ENST00000495176 C2CD5Q86YS7 1000 aa23.73■■□□□ 1.39
CYTH3-211ENST00000495176 ZNF526Q8TF50 670 aaPredicted RBP23.73■■□□□ 1.39
CYTH3-211ENST00000495176 BCORQ6W2J9 1755 aa23.71■■□□□ 1.39
CYTH3-211ENST00000495176 FAM177BA6PVY3 158 aa23.71■■□□□ 1.39
CYTH3-211ENST00000495176 TRIM35Q9UPQ4 493 aa23.71■■□□□ 1.39
CYTH3-211ENST00000495176 ZNF652Q9Y2D9 606 aa23.71■■□□□ 1.39
CYTH3-211ENST00000495176 CARMIL3Q8ND23 1372 aa23.7■■□□□ 1.38
CYTH3-211ENST00000495176 H0YIN7 160 aa23.7■■□□□ 1.38
CYTH3-211ENST00000495176 CCDC184Q52MB2 194 aa23.7■■□□□ 1.38
CYTH3-211ENST00000495176 PRR5LQ6MZQ0 368 aa23.7■■□□□ 1.38
CYTH3-211ENST00000495176 NECTIN2Q92692 538 aa23.7■■□□□ 1.38
CYTH3-211ENST00000495176 SENP3-EIF4A1A0A087X0R7 540 aa23.69■■□□□ 1.38
CYTH3-211ENST00000495176 CNBD1Q8NA66 436 aa23.69■■□□□ 1.38
CYTH3-211ENST00000495176 APAF1O14727 1248 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms