RNA–Protein interactions for RNA: ENST00000494989.1

EPHA1-206, Transcript of EPH receptor A1, humanhuman

TSL 3

Gene EPHA1, Length 753 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA1-206ENST00000494989 RPS6KA4O75676 772 aa13.86□□□□□ -0.19
EPHA1-206ENST00000494989 C1QTNF8P60827 252 aa13.86□□□□□ -0.19
EPHA1-206ENST00000494989 TAF7Q15545 349 aaPredicted RBP13.86□□□□□ -0.19
EPHA1-206ENST00000494989 MRS2Q9HD23 443 aa13.86□□□□□ -0.19
EPHA1-206ENST00000494989 TRIM35Q9UPQ4 493 aa13.86□□□□□ -0.19
EPHA1-206ENST00000494989 RTCBQ9Y3I0 505 aaKnown RBP13.86□□□□□ -0.19
EPHA1-206ENST00000494989 PELP1Q8IZL8 1130 aaKnown RBP13.85□□□□□ -0.19
EPHA1-206ENST00000494989 VSIG10Q8N0Z9 540 aa13.85□□□□□ -0.19
EPHA1-206ENST00000494989 FLAD1Q8NFF5 587 aa13.85□□□□□ -0.19
EPHA1-206ENST00000494989 PNISRQ8TF01 805 aaKnown RBP13.85□□□□□ -0.19
EPHA1-206ENST00000494989 ARHGEF1Q92888 912 aaKnown RBP13.85□□□□□ -0.19
EPHA1-206ENST00000494989 FMNL2Q96PY5 1086 aa13.85□□□□□ -0.19
EPHA1-206ENST00000494989 CCDC87Q9NVE4 849 aa13.85□□□□□ -0.19
EPHA1-206ENST00000494989 ZBTB1Q9Y2K1 713 aa13.85□□□□□ -0.19
EPHA1-206ENST00000494989 APAF1O14727 1248 aa13.84□□□□□ -0.19
EPHA1-206ENST00000494989 HMGB2P26583 209 aaKnown RBP13.84□□□□□ -0.19
EPHA1-206ENST00000494989 UTRNP46939 3433 aa13.84□□□□□ -0.19
EPHA1-206ENST00000494989 TRAPPC3LQ5T215 181 aa13.83□□□□□ -0.2
EPHA1-206ENST00000494989 SRP68Q9UHB9 627 aaKnown RBP13.83□□□□□ -0.2
EPHA1-206ENST00000494989 USP16Q9Y5T5 823 aa13.83□□□□□ -0.2
EPHA1-206ENST00000494989 SOS1Q07889 1333 aaPredicted RBP13.83□□□□□ -0.2
EPHA1-206ENST00000494989 A1BGP04217 495 aa13.82□□□□□ -0.2
EPHA1-206ENST00000494989 PIP4K2AP48426 406 aaPredicted RBP13.82□□□□□ -0.2
EPHA1-206ENST00000494989 AFDNP55196 1824 aaKnown RBP13.81□□□□□ -0.2
EPHA1-206ENST00000494989 GIGYF1O75420 1035 aaPredicted RBP13.81□□□□□ -0.2
EPHA1-206ENST00000494989 ADRA2BP18089 450 aa13.81□□□□□ -0.2
EPHA1-206ENST00000494989 CANXP27824 592 aaKnown RBP13.81□□□□□ -0.2
EPHA1-206ENST00000494989 COL15A1P39059 1388 aa13.81□□□□□ -0.2
EPHA1-206ENST00000494989 SCN7AQ01118 1682 aa13.8□□□□□ -0.2
EPHA1-206ENST00000494989 GRIN3BO60391 1043 aa13.8□□□□□ -0.2
EPHA1-206ENST00000494989 STARD3NLO95772 234 aa13.8□□□□□ -0.2
EPHA1-206ENST00000494989 GYS1P13807 737 aa13.8□□□□□ -0.2
EPHA1-206ENST00000494989 RFC4P35249 363 aa13.8□□□□□ -0.2
EPHA1-206ENST00000494989 EIF4A1P60842 406 aaKnown RBP13.8□□□□□ -0.2
EPHA1-206ENST00000494989 LMOD3Q0VAK6 560 aa13.8□□□□□ -0.2
EPHA1-206ENST00000494989 BCORQ6W2J9 1755 aa13.8□□□□□ -0.2
EPHA1-206ENST00000494989 KIF13BQ9NQT8 1826 aa13.79□□□□□ -0.2
EPHA1-206ENST00000494989 SNRPA1P09661 255 aaKnown RBP13.79□□□□□ -0.2
EPHA1-206ENST00000494989 EIF5P55010 431 aaKnown RBP13.79□□□□□ -0.2
EPHA1-206ENST00000494989 NLGN2Q8NFZ4 835 aa13.79□□□□□ -0.2
EPHA1-206ENST00000494989 TEX13AQ9BXU3 409 aaPredicted RBP13.79□□□□□ -0.2
EPHA1-206ENST00000494989 TSPYL4Q9UJ04 414 aa13.79□□□□□ -0.2
EPHA1-206ENST00000494989 USP42Q9H9J4 1324 aaKnown RBP13.79□□□□□ -0.2
EPHA1-206ENST00000494989 FKBP8Q14318 412 aa13.78□□□□□ -0.2
EPHA1-206ENST00000494989 LAS1LQ9Y4W2 734 aaKnown RBP13.78□□□□□ -0.2
EPHA1-206ENST00000494989 KIAA1551Q9HCM1 1747 aa13.78□□□□□ -0.2
EPHA1-206ENST00000494989 N4BP2Q86UW6 1770 aaPredicted RBP13.78□□□□□ -0.2
EPHA1-206ENST00000494989 NBPF26B4DH59 902 aa13.77□□□□□ -0.21
EPHA1-206ENST00000494989 MMP10P09238 476 aa13.77□□□□□ -0.21
EPHA1-206ENST00000494989 KRT24Q2M2I5 525 aa13.77□□□□□ -0.21
EPHA1-206ENST00000494989 USPL1Q5W0Q7 1092 aa13.77□□□□□ -0.21
EPHA1-206ENST00000494989 NBPF10Q6P3W6 841 aaKnown RBP13.77□□□□□ -0.21
EPHA1-206ENST00000494989 FAM9BQ8IZU0 186 aa13.77□□□□□ -0.21
EPHA1-206ENST00000494989 NBPF15Q8N660 670 aa13.77□□□□□ -0.21
EPHA1-206ENST00000494989 BCL2L12Q9HB09 334 aa13.77□□□□□ -0.21
EPHA1-206ENST00000494989 ZNF330Q9Y3S2 320 aaPredicted RBP13.77□□□□□ -0.21
EPHA1-206ENST00000494989 NUP98P52948 1817 aa13.76□□□□□ -0.21
EPHA1-206ENST00000494989 CHL1O00533 1208 aa13.76□□□□□ -0.21
EPHA1-206ENST00000494989 NARFQ9UHQ1 456 aa13.75□□□□□ -0.21
EPHA1-206ENST00000494989 TBC1D2BQ9UPU7 963 aa13.75□□□□□ -0.21
EPHA1-206ENST00000494989 NRXN2Q9P2S2 1712 aa13.74□□□□□ -0.21
EPHA1-206ENST00000494989 ZPR1O75312 459 aa13.74□□□□□ -0.21
EPHA1-206ENST00000494989 ZNF853P0CG23 659 aa13.74□□□□□ -0.21
EPHA1-206ENST00000494989 YBX3P16989 372 aaKnown RBP eCLIP13.74□□□□□ -0.21
EPHA1-206ENST00000494989 IL6STP40189 918 aaPredicted RBP13.74□□□□□ -0.21
EPHA1-206ENST00000494989 DDR1Q08345 913 aa13.74□□□□□ -0.21
EPHA1-206ENST00000494989 NLGN1Q8N2Q7 840 aa13.74□□□□□ -0.21
EPHA1-206ENST00000494989 BABAM1Q9NWV8 329 aa13.74□□□□□ -0.21
EPHA1-206ENST00000494989 CD2APQ9Y5K6 639 aa13.74□□□□□ -0.21
EPHA1-206ENST00000494989 CFAP44Q96MT7 982 aa13.73□□□□□ -0.21
EPHA1-206ENST00000494989 MBIPQ9NS73 344 aa13.73□□□□□ -0.21
EPHA1-206ENST00000494989 SALL2Q9Y467 1007 aaPredicted RBP13.73□□□□□ -0.21
EPHA1-206ENST00000494989 BRCA1P38398 1863 aaKnown RBP13.73□□□□□ -0.21
EPHA1-206ENST00000494989 ANKRD31Q8N7Z5 1873 aa13.72□□□□□ -0.21
EPHA1-206ENST00000494989 CAMTA2O94983 1202 aa13.72□□□□□ -0.21
EPHA1-206ENST00000494989 TM4SF1P30408 202 aa13.72□□□□□ -0.21
EPHA1-206ENST00000494989 NFIXQ14938 502 aa13.72□□□□□ -0.21
EPHA1-206ENST00000494989 NECTIN2Q92692 538 aa13.72□□□□□ -0.21
EPHA1-206ENST00000494989 A0A087WZG4 1122 aa13.71□□□□□ -0.21
EPHA1-206ENST00000494989 POLRMTO00411 1230 aaKnown RBP13.71□□□□□ -0.21
EPHA1-206ENST00000494989 ANXA1P04083 346 aa13.71□□□□□ -0.21
EPHA1-206ENST00000494989 EIF2S2P20042 333 aaKnown RBP13.71□□□□□ -0.21
EPHA1-206ENST00000494989 PROSER3Q2NL68 480 aa13.71□□□□□ -0.21
EPHA1-206ENST00000494989 DZIP3Q86Y13 1208 aaKnown RBP13.71□□□□□ -0.21
EPHA1-206ENST00000494989 WWC1Q8IX03 1113 aa13.71□□□□□ -0.21
EPHA1-206ENST00000494989 NGEFQ8N5V2 710 aa13.71□□□□□ -0.21
EPHA1-206ENST00000494989 C10orf71Q711Q0 1435 aa13.71□□□□□ -0.22
EPHA1-206ENST00000494989 MYL6BP14649 208 aa13.7□□□□□ -0.22
EPHA1-206ENST00000494989 PDIA6Q15084 440 aa13.7□□□□□ -0.22
EPHA1-206ENST00000494989 CCDC27Q2M243 656 aa13.7□□□□□ -0.22
EPHA1-206ENST00000494989 TBC1D9BQ66K14 1250 aa13.7□□□□□ -0.22
EPHA1-206ENST00000494989 DIEXFQ68CQ4 756 aaKnown RBP13.7□□□□□ -0.22
EPHA1-206ENST00000494989 BICDL1Q6ZP65 573 aa13.7□□□□□ -0.22
EPHA1-206ENST00000494989 IFT57Q9NWB7 429 aa13.7□□□□□ -0.22
EPHA1-206ENST00000494989 PARP3Q9Y6F1 533 aa13.7□□□□□ -0.22
EPHA1-206ENST00000494989 TTLL7Q6ZT98 887 aa13.69□□□□□ -0.22
EPHA1-206ENST00000494989 LRP10Q7Z4F1 713 aa13.69□□□□□ -0.22
EPHA1-206ENST00000494989 MIER1Q8N108 512 aa13.69□□□□□ -0.22
EPHA1-206ENST00000494989 TSR2Q969E8 191 aaKnown RBP13.69□□□□□ -0.22
EPHA1-206ENST00000494989 ATP10DQ9P241 1426 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms