RNA–Protein interactions for RNA: ENST00000494675.5

LRIF1-203, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-203ENST00000494675 RNF135Q8IUD6 432 aa5.23□□□□□ -1.57
LRIF1-203ENST00000494675 XAGE2Q96GT9 111 aa5.23□□□□□ -1.57
LRIF1-203ENST00000494675 ESYT1Q9BSJ8 1104 aa5.23□□□□□ -1.57
LRIF1-203ENST00000494675 CFHR5Q9BXR6 569 aa5.23□□□□□ -1.57
LRIF1-203ENST00000494675 SEMA6BQ9H3T3 888 aa5.23□□□□□ -1.57
LRIF1-203ENST00000494675 CSB-PGBD3P0DP91 1061 aa5.23□□□□□ -1.57
LRIF1-203ENST00000494675 SCTRP47872 440 aa5.23□□□□□ -1.57
LRIF1-203ENST00000494675 SNRPNP63162 240 aaKnown RBP5.23□□□□□ -1.57
LRIF1-203ENST00000494675 PGBD3Q8N328 593 aa5.23□□□□□ -1.57
LRIF1-203ENST00000494675 CNKSR1Q969H4 720 aa5.23□□□□□ -1.57
LRIF1-203ENST00000494675 PPP1R12CQ9BZL4 782 aa5.23□□□□□ -1.57
LRIF1-203ENST00000494675 DOLKQ9UPQ8 538 aa5.23□□□□□ -1.57
LRIF1-203ENST00000494675 USP4Q13107 963 aa5.22□□□□□ -1.57
LRIF1-203ENST00000494675 SIRT1Q96EB6 747 aa5.22□□□□□ -1.57
LRIF1-203ENST00000494675 CDCA7Q9BWT1 371 aaPredicted RBP5.22□□□□□ -1.57
LRIF1-203ENST00000494675 RAB6BQ9NRW1 208 aa5.22□□□□□ -1.57
LRIF1-203ENST00000494675 PALM3A6NDB9 673 aaPredicted RBP5.21□□□□□ -1.57
LRIF1-203ENST00000494675 RFX1P22670 979 aa5.21□□□□□ -1.57
LRIF1-203ENST00000494675 PHKA2P46019 1235 aa5.21□□□□□ -1.57
LRIF1-203ENST00000494675 LBRQ14739 615 aaKnown RBP5.21□□□□□ -1.57
LRIF1-203ENST00000494675 MAP7D1Q3KQU3 841 aa5.21□□□□□ -1.57
LRIF1-203ENST00000494675 TSGA10IPQ3SY00 556 aa5.21□□□□□ -1.57
LRIF1-203ENST00000494675 FOXD4L6Q3SYB3 417 aaPredicted RBP5.21□□□□□ -1.57
LRIF1-203ENST00000494675 FOXD4L3Q6VB84 417 aaPredicted RBP5.21□□□□□ -1.57
LRIF1-203ENST00000494675 TFIP11Q9UBB9 837 aaKnown RBP5.21□□□□□ -1.57
LRIF1-203ENST00000494675 A0A1B0GTH6 734 aa5.21□□□□□ -1.58
LRIF1-203ENST00000494675 IL2RAP01589 272 aa5.21□□□□□ -1.58
LRIF1-203ENST00000494675 COL8A1P27658 744 aa5.21□□□□□ -1.58
LRIF1-203ENST00000494675 LMOD1P29536 600 aaPredicted RBP5.21□□□□□ -1.58
LRIF1-203ENST00000494675 UCN2Q96RP3 112 aa5.21□□□□□ -1.58
LRIF1-203ENST00000494675 GPAMQ9HCL2 828 aa5.21□□□□□ -1.58
LRIF1-203ENST00000494675 CHIC2Q9UKJ5 165 aa5.21□□□□□ -1.58
LRIF1-203ENST00000494675 OXLD1Q5BKU9 147 aa5.2□□□□□ -1.58
LRIF1-203ENST00000494675 EFHC2Q5JST6 749 aa5.2□□□□□ -1.58
LRIF1-203ENST00000494675 OXCT2Q9BYC2 517 aaPredicted RBP5.2□□□□□ -1.58
LRIF1-203ENST00000494675 PIK3CDO00329 1044 aa5.19□□□□□ -1.58
LRIF1-203ENST00000494675 TBC1D9Q6ZT07 1266 aa5.19□□□□□ -1.58
LRIF1-203ENST00000494675 PLPP7Q8NBV4 271 aa5.19□□□□□ -1.58
LRIF1-203ENST00000494675 RRAGCQ9HB90 399 aa5.19□□□□□ -1.58
LRIF1-203ENST00000494675 ACIN1Q9UKV3 1341 aaKnown RBP5.19□□□□□ -1.58
LRIF1-203ENST00000494675 C1QTNF9BB2RNN3 333 aa5.19□□□□□ -1.58
LRIF1-203ENST00000494675 ATP9BO43861 1147 aa5.19□□□□□ -1.58
LRIF1-203ENST00000494675 SKIP12755 728 aa5.19□□□□□ -1.58
LRIF1-203ENST00000494675 MSX1P28360 303 aa5.19□□□□□ -1.58
LRIF1-203ENST00000494675 CFAP70Q5T0N1 1121 aa5.19□□□□□ -1.58
LRIF1-203ENST00000494675 NFATC2IPQ8NCF5 419 aa5.19□□□□□ -1.58
LRIF1-203ENST00000494675 GDF2Q9UK05 429 aaPredicted RBP5.19□□□□□ -1.58
LRIF1-203ENST00000494675 LZTS3O60299 673 aaPredicted RBP5.18□□□□□ -1.58
LRIF1-203ENST00000494675 PPP1R15AO75807 674 aaPredicted RBP5.18□□□□□ -1.58
LRIF1-203ENST00000494675 GRIN2CQ14957 1233 aa5.18□□□□□ -1.58
LRIF1-203ENST00000494675 C4orf17Q53FE4 359 aa5.18□□□□□ -1.58
LRIF1-203ENST00000494675 KLRG1Q96E93 195 aa5.18□□□□□ -1.58
LRIF1-203ENST00000494675 MAFBQ9Y5Q3 323 aaPredicted RBP5.18□□□□□ -1.58
LRIF1-203ENST00000494675 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.17□□□□□ -1.58
LRIF1-203ENST00000494675 SHISA8B8ZZ34 492 aa5.17□□□□□ -1.58
LRIF1-203ENST00000494675 PIK3R2O00459 728 aa5.17□□□□□ -1.58
LRIF1-203ENST00000494675 BMP4P12644 408 aa5.17□□□□□ -1.58
LRIF1-203ENST00000494675 RHBDD1Q8TEB9 315 aa5.17□□□□□ -1.58
LRIF1-203ENST00000494675 PBXIP1Q96AQ6 731 aa5.17□□□□□ -1.58
LRIF1-203ENST00000494675 FHDC1Q9C0D6 1143 aaPredicted RBP5.17□□□□□ -1.58
LRIF1-203ENST00000494675 TLR1Q15399 786 aa5.17□□□□□ -1.58
LRIF1-203ENST00000494675 GOLGA6L1Q8N7Z2 621 aa5.17□□□□□ -1.58
LRIF1-203ENST00000494675 RUBCNLQ9H714 662 aa5.17□□□□□ -1.58
LRIF1-203ENST00000494675 ATXN7L1Q9ULK2 861 aaPredicted RBP5.17□□□□□ -1.58
LRIF1-203ENST00000494675 HRH3Q9Y5N1 445 aa5.17□□□□□ -1.58
LRIF1-203ENST00000494675 USP17L5A8MUK1 530 aa5.16□□□□□ -1.58
LRIF1-203ENST00000494675 PAX4O43316 350 aa5.16□□□□□ -1.58
LRIF1-203ENST00000494675 EML3Q32P44 896 aa5.16□□□□□ -1.58
LRIF1-203ENST00000494675 FIGNL1Q6PIW4 674 aa5.16□□□□□ -1.58
LRIF1-203ENST00000494675 LINC00114Q6XXX2 140 aa5.16□□□□□ -1.58
LRIF1-203ENST00000494675 PPARGC1BQ86YN6 1023 aaKnown RBP5.16□□□□□ -1.58
LRIF1-203ENST00000494675 DEPDC4Q8N2C3 294 aa5.16□□□□□ -1.58
LRIF1-203ENST00000494675 EDARADDQ8WWZ3 215 aa5.16□□□□□ -1.58
LRIF1-203ENST00000494675 FMNL2Q96PY5 1086 aa5.16□□□□□ -1.58
LRIF1-203ENST00000494675 USP17L3A6NCW0 530 aa5.15□□□□□ -1.58
LRIF1-203ENST00000494675 USP17L4A6NCW7 530 aa5.15□□□□□ -1.58
LRIF1-203ENST00000494675 AMPD1P23109 780 aa5.15□□□□□ -1.58
LRIF1-203ENST00000494675 CDCA8Q53HL2 280 aa5.15□□□□□ -1.58
LRIF1-203ENST00000494675 MCTP1Q6DN14 999 aa5.15□□□□□ -1.58
LRIF1-203ENST00000494675 USP17L2Q6R6M4 530 aa5.15□□□□□ -1.58
LRIF1-203ENST00000494675 USP17L1Q7RTZ2 530 aa5.15□□□□□ -1.58
LRIF1-203ENST00000494675 CD163Q86VB7 1156 aa5.15□□□□□ -1.58
LRIF1-203ENST00000494675 SUV39H2Q9H5I1 410 aa5.15□□□□□ -1.58
LRIF1-203ENST00000494675 VRTNQ9H8Y1 702 aa5.15□□□□□ -1.58
LRIF1-203ENST00000494675 NOD1Q9Y239 953 aa5.15□□□□□ -1.58
LRIF1-203ENST00000494675 NCOA4Q13772 614 aa5.15□□□□□ -1.59
LRIF1-203ENST00000494675 DOC2BQ14184 412 aa5.15□□□□□ -1.59
LRIF1-203ENST00000494675 ETNK1Q9HBU6 452 aa5.15□□□□□ -1.59
LRIF1-203ENST00000494675 FGFR3P22607 806 aa5.14□□□□□ -1.59
LRIF1-203ENST00000494675 PLA2G4AP47712 749 aa5.14□□□□□ -1.59
LRIF1-203ENST00000494675 GDF10P55107 478 aa5.14□□□□□ -1.59
LRIF1-203ENST00000494675 C1orf229Q6ZS94 237 aaPredicted RBP5.14□□□□□ -1.59
LRIF1-203ENST00000494675 PLEKHM2Q8IWE5 1019 aa5.14□□□□□ -1.59
LRIF1-203ENST00000494675 C1orf216Q8TAB5 229 aa5.14□□□□□ -1.59
LRIF1-203ENST00000494675 NIFKQ9BYG3 293 aaKnown RBP5.14□□□□□ -1.59
LRIF1-203ENST00000494675 SRPK2P78362 688 aaKnown RBP5.13□□□□□ -1.59
LRIF1-203ENST00000494675 AIDAQ96BJ3 306 aa5.13□□□□□ -1.59
LRIF1-203ENST00000494675 CRISPLD1Q9H336 500 aa5.13□□□□□ -1.59
LRIF1-203ENST00000494675 MKRN1Q9UHC7 482 aaKnown RBP5.13□□□□□ -1.59
LRIF1-203ENST00000494675 PCDHGC4Q9Y5F7 938 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms