RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 VSIG10Q8N0Z9 540 aa14.5□□□□□ -0.09
APTX-230ENST00000494649 CFAP44Q96MT7 982 aa14.5□□□□□ -0.09
APTX-230ENST00000494649 ARXQ96QS3 562 aa14.5□□□□□ -0.09
APTX-230ENST00000494649 CCDC87Q9NVE4 849 aa14.5□□□□□ -0.09
APTX-230ENST00000494649 RTCBQ9Y3I0 505 aaKnown RBP14.5□□□□□ -0.09
APTX-230ENST00000494649 EIF2S2P20042 333 aaKnown RBP14.5□□□□□ -0.09
APTX-230ENST00000494649 SPINK5Q9NQ38 1064 aaPredicted RBP14.5□□□□□ -0.09
APTX-230ENST00000494649 CNTNAP4Q9C0A0 1308 aa14.49□□□□□ -0.09
APTX-230ENST00000494649 GIGYF1O75420 1035 aaPredicted RBP14.49□□□□□ -0.09
APTX-230ENST00000494649 STARD3NLO95772 234 aa14.49□□□□□ -0.09
APTX-230ENST00000494649 CCDC27Q2M243 656 aa14.48□□□□□ -0.09
APTX-230ENST00000494649 NGEFQ8N5V2 710 aa14.48□□□□□ -0.09
APTX-230ENST00000494649 IFT57Q9NWB7 429 aa14.48□□□□□ -0.09
APTX-230ENST00000494649 UBR3Q6ZT12 1888 aa14.48□□□□□ -0.09
APTX-230ENST00000494649 GNAI1P63096 354 aa14.48□□□□□ -0.09
APTX-230ENST00000494649 ARHGEF1Q92888 912 aaKnown RBP14.48□□□□□ -0.09
APTX-230ENST00000494649 ZNF831Q5JPB2 1677 aa14.47□□□□□ -0.09
APTX-230ENST00000494649 RPS6KA4O75676 772 aa14.47□□□□□ -0.09
APTX-230ENST00000494649 ZNF853P0CG23 659 aa14.47□□□□□ -0.09
APTX-230ENST00000494649 CALD1Q05682 793 aaKnown RBP14.47□□□□□ -0.09
APTX-230ENST00000494649 TRAPPC3LQ5T215 181 aa14.47□□□□□ -0.09
APTX-230ENST00000494649 SRP68Q9UHB9 627 aaKnown RBP14.47□□□□□ -0.09
APTX-230ENST00000494649 ANXA1P04083 346 aa14.46□□□□□ -0.09
APTX-230ENST00000494649 CASZ1Q86V15 1759 aa14.46□□□□□ -0.09
APTX-230ENST00000494649 MYL6BP14649 208 aa14.46□□□□□ -0.09
APTX-230ENST00000494649 SSFA2P28290 1259 aa14.46□□□□□ -0.09
APTX-230ENST00000494649 HNRNPUQ00839 825 aaKnown RBP eCLIP14.46□□□□□ -0.09
APTX-230ENST00000494649 RC3H1Q5TC82 1133 aaKnown RBP14.46□□□□□ -0.09
APTX-230ENST00000494649 RFC4P35249 363 aa14.45□□□□□ -0.1
APTX-230ENST00000494649 TSPYL6Q8N831 410 aa14.45□□□□□ -0.1
APTX-230ENST00000494649 C8orf58Q8NAV2 365 aa14.45□□□□□ -0.1
APTX-230ENST00000494649 TEX13AQ9BXU3 409 aaPredicted RBP14.45□□□□□ -0.1
APTX-230ENST00000494649 NBPF26B4DH59 902 aa14.45□□□□□ -0.1
APTX-230ENST00000494649 NBPF10Q6P3W6 841 aaKnown RBP14.45□□□□□ -0.1
APTX-230ENST00000494649 NBPF15Q8N660 670 aa14.45□□□□□ -0.1
APTX-230ENST00000494649 TBC1D2BQ9UPU7 963 aa14.45□□□□□ -0.1
APTX-230ENST00000494649 SOS1Q07889 1333 aaPredicted RBP14.44□□□□□ -0.1
APTX-230ENST00000494649 GOLGB1Q14789 3259 aaKnown RBP14.44□□□□□ -0.1
APTX-230ENST00000494649 TCERG1O14776 1098 aaKnown RBP14.44□□□□□ -0.1
APTX-230ENST00000494649 DUSP27Q5VZP5 1158 aa14.44□□□□□ -0.1
APTX-230ENST00000494649 CDCA7LQ96GN5 454 aa14.44□□□□□ -0.1
APTX-230ENST00000494649 BABAM1Q9NWV8 329 aa14.44□□□□□ -0.1
APTX-230ENST00000494649 CICQ96RK0 1608 aaPredicted RBP14.44□□□□□ -0.1
APTX-230ENST00000494649 FANCIQ9NVI1 1328 aa14.44□□□□□ -0.1
APTX-230ENST00000494649 COL15A1P39059 1388 aa14.44□□□□□ -0.1
APTX-230ENST00000494649 WDR63Q8IWG1 891 aa14.43□□□□□ -0.1
APTX-230ENST00000494649 PROSER3Q2NL68 480 aa14.43□□□□□ -0.1
APTX-230ENST00000494649 USPL1Q5W0Q7 1092 aa14.43□□□□□ -0.1
APTX-230ENST00000494649 MTFR1LQ9H019 292 aa14.43□□□□□ -0.1
APTX-230ENST00000494649 SPON1Q9HCB6 807 aa14.43□□□□□ -0.1
APTX-230ENST00000494649 NPM2Q86SE8 214 aaKnown RBP14.42□□□□□ -0.1
APTX-230ENST00000494649 FLAD1Q8NFF5 587 aa14.42□□□□□ -0.1
APTX-230ENST00000494649 ZNF521Q96K83 1311 aa14.42□□□□□ -0.1
APTX-230ENST00000494649 C4AP0C0L4 1744 aa14.42□□□□□ -0.1
APTX-230ENST00000494649 HMGB2P26583 209 aaKnown RBP14.42□□□□□ -0.1
APTX-230ENST00000494649 EIF5P55010 431 aaKnown RBP14.42□□□□□ -0.1
APTX-230ENST00000494649 HDGFL1Q5TGJ6 251 aa14.42□□□□□ -0.1
APTX-230ENST00000494649 KLHL34Q8N239 644 aa14.42□□□□□ -0.1
APTX-230ENST00000494649 LAMB4A4D0S4 1761 aa14.41□□□□□ -0.1
APTX-230ENST00000494649 QSER1Q2KHR3 1735 aa14.41□□□□□ -0.1
APTX-230ENST00000494649 CHPF2Q9P2E5 772 aa14.41□□□□□ -0.1
APTX-230ENST00000494649 IL16Q14005 1332 aa14.4□□□□□ -0.1
APTX-230ENST00000494649 ZPR1O75312 459 aa14.4□□□□□ -0.1
APTX-230ENST00000494649 GYS1P13807 737 aa14.4□□□□□ -0.1
APTX-230ENST00000494649 IL6STP40189 918 aaPredicted RBP14.4□□□□□ -0.1
APTX-230ENST00000494649 PTGER2P43116 358 aa14.4□□□□□ -0.1
APTX-230ENST00000494649 EXOSC9Q06265 439 aaKnown RBP14.4□□□□□ -0.1
APTX-230ENST00000494649 GOLGA2Q08379 1002 aa14.4□□□□□ -0.1
APTX-230ENST00000494649 FKBP8Q14318 412 aa14.4□□□□□ -0.1
APTX-230ENST00000494649 BICDL1Q6ZP65 573 aa14.4□□□□□ -0.1
APTX-230ENST00000494649 PPP1R1BQ9UD71 204 aaPredicted RBP14.4□□□□□ -0.1
APTX-230ENST00000494649 UTRNP46939 3433 aa14.4□□□□□ -0.1
APTX-230ENST00000494649 USP42Q9H9J4 1324 aaKnown RBP14.4□□□□□ -0.1
APTX-230ENST00000494649 ADRA2BP18089 450 aa14.4□□□□□ -0.1
APTX-230ENST00000494649 AIMP1Q12904 312 aaKnown RBP14.4□□□□□ -0.1
APTX-230ENST00000494649 DZIP3Q86Y13 1208 aaKnown RBP14.4□□□□□ -0.1
APTX-230ENST00000494649 TWISTNBQ3B726 338 aaPredicted RBP14.39□□□□□ -0.11
APTX-230ENST00000494649 NCBP3Q53F19 620 aaKnown RBP14.39□□□□□ -0.11
APTX-230ENST00000494649 PDIA6Q15084 440 aa14.38□□□□□ -0.11
APTX-230ENST00000494649 TTLL7Q6ZT98 887 aa14.38□□□□□ -0.11
APTX-230ENST00000494649 SLC16A10Q8TF71 515 aa14.38□□□□□ -0.11
APTX-230ENST00000494649 ZNF428Q96B54 188 aa14.38□□□□□ -0.11
APTX-230ENST00000494649 YTHDC1Q96MU7 727 aaKnown RBP14.38□□□□□ -0.11
APTX-230ENST00000494649 ZBTB3Q9H5J0 574 aa14.38□□□□□ -0.11
APTX-230ENST00000494649 MYH16Q9H6N6 1097 aa14.38□□□□□ -0.11
APTX-230ENST00000494649 BCL2L12Q9HB09 334 aa14.38□□□□□ -0.11
APTX-230ENST00000494649 MMP10P09238 476 aa14.37□□□□□ -0.11
APTX-230ENST00000494649 POLD1P28340 1107 aa14.37□□□□□ -0.11
APTX-230ENST00000494649 SGIP1Q9BQI5 828 aa14.37□□□□□ -0.11
APTX-230ENST00000494649 NARFQ9UHQ1 456 aa14.37□□□□□ -0.11
APTX-230ENST00000494649 HLFQ16534 295 aa14.36□□□□□ -0.11
APTX-230ENST00000494649 CAMTA2O94983 1202 aa14.35□□□□□ -0.11
APTX-230ENST00000494649 SLFN5Q08AF3 891 aa14.35□□□□□ -0.11
APTX-230ENST00000494649 COPS6Q7L5N1 327 aa14.35□□□□□ -0.11
APTX-230ENST00000494649 XAGE3Q8WTP9 111 aa14.35□□□□□ -0.11
APTX-230ENST00000494649 PHAXQ9H814 394 aaKnown RBP14.35□□□□□ -0.11
APTX-230ENST00000494649 A0A087WZG4 1122 aa14.35□□□□□ -0.11
APTX-230ENST00000494649 E9PSI1 815 aa14.35□□□□□ -0.11
APTX-230ENST00000494649 TBC1D9BQ66K14 1250 aa14.35□□□□□ -0.11
APTX-230ENST00000494649 LRP10Q7Z4F1 713 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms