RNA–Protein interactions for RNA: ENST00000494327.1

HPS3-207, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 556 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-207ENST00000494327 NLGN1Q8N2Q7 840 aa28.91■■■□□ 2.22
HPS3-207ENST00000494327 NLGN2Q8NFZ4 835 aa28.91■■■□□ 2.22
HPS3-207ENST00000494327 UBR2Q8IWV8 1755 aa28.9■■■□□ 2.22
HPS3-207ENST00000494327 MMP10P09238 476 aa28.9■■■□□ 2.22
HPS3-207ENST00000494327 SOS1Q07889 1333 aaPredicted RBP28.9■■■□□ 2.22
HPS3-207ENST00000494327 NEUROD2Q15784 382 aa28.88■■■□□ 2.21
HPS3-207ENST00000494327 RRP7AQ9Y3A4 280 aaKnown RBP28.88■■■□□ 2.21
HPS3-207ENST00000494327 ZPR1O75312 459 aa28.87■■■□□ 2.21
HPS3-207ENST00000494327 TMPOP42166 694 aaKnown RBP28.87■■■□□ 2.21
HPS3-207ENST00000494327 RUNDC1Q96C34 613 aa28.87■■■□□ 2.21
HPS3-207ENST00000494327 USP42Q9H9J4 1324 aaKnown RBP28.87■■■□□ 2.21
HPS3-207ENST00000494327 PELP1Q8IZL8 1130 aaKnown RBP28.86■■■□□ 2.21
HPS3-207ENST00000494327 DLG5Q8TDM6 1919 aa28.85■■■□□ 2.21
HPS3-207ENST00000494327 PRAMEF22A3QJZ6 481 aa28.85■■■□□ 2.21
HPS3-207ENST00000494327 USPL1Q5W0Q7 1092 aa28.85■■■□□ 2.21
HPS3-207ENST00000494327 PNISRQ8TF01 805 aaKnown RBP28.85■■■□□ 2.21
HPS3-207ENST00000494327 ZNF330Q9Y3S2 320 aaPredicted RBP28.85■■■□□ 2.21
HPS3-207ENST00000494327 CD2APQ9Y5K6 639 aa28.85■■■□□ 2.21
HPS3-207ENST00000494327 USP16Q9Y5T5 823 aa28.85■■■□□ 2.21
HPS3-207ENST00000494327 ANP32CO43423 234 aa28.84■■■□□ 2.21
HPS3-207ENST00000494327 A1BGP04217 495 aa28.84■■■□□ 2.21
HPS3-207ENST00000494327 SNRPA1P09661 255 aaKnown RBP28.84■■■□□ 2.21
HPS3-207ENST00000494327 FKBP8Q14318 412 aa28.84■■■□□ 2.21
HPS3-207ENST00000494327 COL15A1P39059 1388 aa28.84■■■□□ 2.21
HPS3-207ENST00000494327 GPR162Q16538 588 aa28.83■■■□□ 2.21
HPS3-207ENST00000494327 PARP3Q9Y6F1 533 aa28.82■■■□□ 2.2
HPS3-207ENST00000494327 C4AP0C0L4 1744 aa28.81■■■□□ 2.2
HPS3-207ENST00000494327 LMOD3Q0VAK6 560 aa28.81■■■□□ 2.2
HPS3-207ENST00000494327 CCDC184Q52MB2 194 aa28.81■■■□□ 2.2
HPS3-207ENST00000494327 NARFQ9UHQ1 456 aa28.81■■■□□ 2.2
HPS3-207ENST00000494327 EIF5P55010 431 aaKnown RBP28.8■■■□□ 2.2
HPS3-207ENST00000494327 NPM2Q86SE8 214 aaKnown RBP28.8■■■□□ 2.2
HPS3-207ENST00000494327 PIP4K2AP48426 406 aaPredicted RBP28.79■■■□□ 2.2
HPS3-207ENST00000494327 A0A087WZG4 1122 aa28.78■■■□□ 2.2
HPS3-207ENST00000494327 IL6STP40189 918 aaPredicted RBP28.77■■■□□ 2.2
HPS3-207ENST00000494327 TSPYL4Q9UJ04 414 aa28.76■■■□□ 2.19
HPS3-207ENST00000494327 TBC1D2BQ9UPU7 963 aa28.76■■■□□ 2.19
HPS3-207ENST00000494327 EIF4A1P60842 406 aaKnown RBP28.75■■■□□ 2.19
HPS3-207ENST00000494327 WWC3Q9ULE0 1092 aa28.75■■■□□ 2.19
HPS3-207ENST00000494327 DDR1Q08345 913 aa28.74■■■□□ 2.19
HPS3-207ENST00000494327 TM4SF1P30408 202 aa28.73■■■□□ 2.19
HPS3-207ENST00000494327 BCL2L12Q9HB09 334 aa28.73■■■□□ 2.19
HPS3-207ENST00000494327 TRIM35Q9UPQ4 493 aa28.73■■■□□ 2.19
HPS3-207ENST00000494327 LAS1LQ9Y4W2 734 aaKnown RBP28.72■■■□□ 2.19
HPS3-207ENST00000494327 APAF1O14727 1248 aa28.71■■■□□ 2.19
HPS3-207ENST00000494327 GIGYF1O75420 1035 aaPredicted RBP28.71■■■□□ 2.19
HPS3-207ENST00000494327 YY1P25490 414 aa28.71■■■□□ 2.19
HPS3-207ENST00000494327 NFIXQ14938 502 aa28.71■■■□□ 2.19
HPS3-207ENST00000494327 BICDL1Q6ZP65 573 aa28.71■■■□□ 2.19
HPS3-207ENST00000494327 MRS2Q9HD23 443 aa28.71■■■□□ 2.19
HPS3-207ENST00000494327 POLRMTO00411 1230 aaKnown RBP28.7■■■□□ 2.18
HPS3-207ENST00000494327 YBX3P16989 372 aaKnown RBP eCLIP28.7■■■□□ 2.18
HPS3-207ENST00000494327 DZIP3Q86Y13 1208 aaKnown RBP28.69■■■□□ 2.18
HPS3-207ENST00000494327 KDM3BQ7LBC6 1761 aa28.68■■■□□ 2.18
HPS3-207ENST00000494327 NBPF26B4DH59 902 aa28.68■■■□□ 2.18
HPS3-207ENST00000494327 NBPF10Q6P3W6 841 aaKnown RBP28.68■■■□□ 2.18
HPS3-207ENST00000494327 NBPF15Q8N660 670 aa28.68■■■□□ 2.18
HPS3-207ENST00000494327 BABAM1Q9NWV8 329 aa28.67■■■□□ 2.18
HPS3-207ENST00000494327 C10orf71Q711Q0 1435 aa28.67■■■□□ 2.18
HPS3-207ENST00000494327 A0A0G2JLW4 131 aa28.66■■■□□ 2.18
HPS3-207ENST00000494327 TGFB2P61812 414 aa28.66■■■□□ 2.18
HPS3-207ENST00000494327 CAMTA2O94983 1202 aa28.65■■■□□ 2.18
HPS3-207ENST00000494327 SERPINB2P05120 415 aa28.65■■■□□ 2.18
HPS3-207ENST00000494327 TBC1D9BQ66K14 1250 aa28.65■■■□□ 2.18
HPS3-207ENST00000494327 NGEFQ8N5V2 710 aa28.65■■■□□ 2.18
HPS3-207ENST00000494327 GRIN3BO60391 1043 aa28.64■■■□□ 2.18
HPS3-207ENST00000494327 SENP3-EIF4A1A0A087X0R7 540 aa28.63■■■□□ 2.17
HPS3-207ENST00000494327 DPEP1P16444 411 aa28.63■■■□□ 2.17
HPS3-207ENST00000494327 PXDNLA1KZ92 1463 aa28.62■■■□□ 2.17
HPS3-207ENST00000494327 CHL1O00533 1208 aa28.62■■■□□ 2.17
HPS3-207ENST00000494327 EIF2S2P20042 333 aaKnown RBP28.62■■■□□ 2.17
HPS3-207ENST00000494327 MYL6BP14649 208 aa28.61■■■□□ 2.17
HPS3-207ENST00000494327 SETDB2Q96T68 719 aa28.58■■■□□ 2.17
HPS3-207ENST00000494327 KRT24Q2M2I5 525 aa28.57■■■□□ 2.16
HPS3-207ENST00000494327 NECTIN2Q92692 538 aa28.57■■■□□ 2.16
HPS3-207ENST00000494327 CFAP44Q96MT7 982 aa28.57■■■□□ 2.16
HPS3-207ENST00000494327 BCS1LQ9Y276 419 aa28.57■■■□□ 2.16
HPS3-207ENST00000494327 ZNF652Q9Y2D9 606 aa28.57■■■□□ 2.16
HPS3-207ENST00000494327 LAMB4A4D0S4 1761 aa28.57■■■□□ 2.16
HPS3-207ENST00000494327 KIF13BQ9NQT8 1826 aa28.57■■■□□ 2.16
HPS3-207ENST00000494327 CHRNA5P30532 468 aa28.56■■■□□ 2.16
HPS3-207ENST00000494327 N4BP2Q86UW6 1770 aaPredicted RBP28.55■■■□□ 2.16
HPS3-207ENST00000494327 SCN7AQ01118 1682 aa28.55■■■□□ 2.16
HPS3-207ENST00000494327 NPHP1O15259 732 aa28.55■■■□□ 2.16
HPS3-207ENST00000494327 CLEC4GQ6UXB4 293 aa28.55■■■□□ 2.16
HPS3-207ENST00000494327 CARMIL3Q8ND23 1372 aa28.54■■■□□ 2.16
HPS3-207ENST00000494327 KCNA3P22001 575 aa28.54■■■□□ 2.16
HPS3-207ENST00000494327 CALD1Q05682 793 aaKnown RBP28.54■■■□□ 2.16
HPS3-207ENST00000494327 CCDC24Q8N4L8 307 aa28.54■■■□□ 2.16
HPS3-207ENST00000494327 HLFQ16534 295 aa28.53■■■□□ 2.16
HPS3-207ENST00000494327 MBIPQ9NS73 344 aa28.53■■■□□ 2.16
HPS3-207ENST00000494327 ERBB4Q15303 1308 aa28.52■■■□□ 2.16
HPS3-207ENST00000494327 KIF6Q6ZMV9 814 aa28.52■■■□□ 2.16
HPS3-207ENST00000494327 TTLL7Q6ZT98 887 aa28.52■■■□□ 2.16
HPS3-207ENST00000494327 PIM2Q9P1W9 311 aa28.52■■■□□ 2.16
HPS3-207ENST00000494327 ANXA1P04083 346 aa28.51■■■□□ 2.15
HPS3-207ENST00000494327 GNAI1P63096 354 aa28.51■■■□□ 2.15
HPS3-207ENST00000494327 PRR5LQ6MZQ0 368 aa28.51■■■□□ 2.15
HPS3-207ENST00000494327 FAM9BQ8IZU0 186 aa28.51■■■□□ 2.15
HPS3-207ENST00000494327 IFT57Q9NWB7 429 aa28.51■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms