RNA–Protein interactions for RNA: ENST00000493564.1

SGIP1-213, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-213ENST00000493564 A1BGP04217 495 aa12.45□□□□□ -0.42
SGIP1-213ENST00000493564 GYS1P13807 737 aa12.45□□□□□ -0.42
SGIP1-213ENST00000493564 PIP4K2AP48426 406 aaPredicted RBP12.45□□□□□ -0.42
SGIP1-213ENST00000493564 NLGN2Q8NFZ4 835 aa12.45□□□□□ -0.42
SGIP1-213ENST00000493564 RUNDC1Q96C34 613 aa12.45□□□□□ -0.42
SGIP1-213ENST00000493564 ZNF330Q9Y3S2 320 aaPredicted RBP12.45□□□□□ -0.42
SGIP1-213ENST00000493564 DCAF8L1A6NGE4 600 aa12.44□□□□□ -0.42
SGIP1-213ENST00000493564 MMP10P09238 476 aa12.44□□□□□ -0.42
SGIP1-213ENST00000493564 PELP1Q8IZL8 1130 aaKnown RBP12.44□□□□□ -0.42
SGIP1-213ENST00000493564 TEX13AQ9BXU3 409 aaPredicted RBP12.44□□□□□ -0.42
SGIP1-213ENST00000493564 COL5A3P25940 1745 aaPredicted RBP12.44□□□□□ -0.42
SGIP1-213ENST00000493564 TJP1Q07157 1748 aa12.44□□□□□ -0.42
SGIP1-213ENST00000493564 SOS1Q07889 1333 aaPredicted RBP12.43□□□□□ -0.42
SGIP1-213ENST00000493564 ZNF831Q5JPB2 1677 aa12.43□□□□□ -0.42
SGIP1-213ENST00000493564 ZPR1O75312 459 aa12.43□□□□□ -0.42
SGIP1-213ENST00000493564 FKBP8Q14318 412 aa12.43□□□□□ -0.42
SGIP1-213ENST00000493564 USPL1Q5W0Q7 1092 aa12.43□□□□□ -0.42
SGIP1-213ENST00000493564 NLGN1Q8N2Q7 840 aa12.43□□□□□ -0.42
SGIP1-213ENST00000493564 WWC3Q9ULE0 1092 aa12.43□□□□□ -0.42
SGIP1-213ENST00000493564 DLG5Q8TDM6 1919 aa12.43□□□□□ -0.42
SGIP1-213ENST00000493564 SNRPA1P09661 255 aaKnown RBP12.42□□□□□ -0.42
SGIP1-213ENST00000493564 LAS1LQ9Y4W2 734 aaKnown RBP12.42□□□□□ -0.42
SGIP1-213ENST00000493564 SIPA1L3O60292 1781 aaPredicted RBP12.42□□□□□ -0.42
SGIP1-213ENST00000493564 USP42Q9H9J4 1324 aaKnown RBP12.41□□□□□ -0.42
SGIP1-213ENST00000493564 APAF1O14727 1248 aa12.41□□□□□ -0.42
SGIP1-213ENST00000493564 GPR162Q16538 588 aa12.41□□□□□ -0.42
SGIP1-213ENST00000493564 TSPYL4Q9UJ04 414 aa12.41□□□□□ -0.42
SGIP1-213ENST00000493564 TRIM35Q9UPQ4 493 aa12.41□□□□□ -0.42
SGIP1-213ENST00000493564 TBC1D2BQ9UPU7 963 aa12.41□□□□□ -0.42
SGIP1-213ENST00000493564 EIF5P55010 431 aaKnown RBP12.4□□□□□ -0.42
SGIP1-213ENST00000493564 EIF4A1P60842 406 aaKnown RBP12.4□□□□□ -0.42
SGIP1-213ENST00000493564 PNISRQ8TF01 805 aaKnown RBP12.4□□□□□ -0.42
SGIP1-213ENST00000493564 MRS2Q9HD23 443 aa12.4□□□□□ -0.42
SGIP1-213ENST00000493564 NARFQ9UHQ1 456 aa12.4□□□□□ -0.42
SGIP1-213ENST00000493564 PARP3Q9Y6F1 533 aa12.4□□□□□ -0.42
SGIP1-213ENST00000493564 UBR2Q8IWV8 1755 aa12.4□□□□□ -0.42
SGIP1-213ENST00000493564 COL15A1P39059 1388 aa12.4□□□□□ -0.42
SGIP1-213ENST00000493564 COL24A1Q17RW2 1714 aa12.4□□□□□ -0.43
SGIP1-213ENST00000493564 UTRNP46939 3433 aa12.39□□□□□ -0.43
SGIP1-213ENST00000493564 LMOD3Q0VAK6 560 aa12.39□□□□□ -0.43
SGIP1-213ENST00000493564 BICDL1Q6ZP65 573 aa12.39□□□□□ -0.43
SGIP1-213ENST00000493564 NPM2Q86SE8 214 aaKnown RBP12.39□□□□□ -0.43
SGIP1-213ENST00000493564 NGEFQ8N5V2 710 aa12.39□□□□□ -0.43
SGIP1-213ENST00000493564 BCL2L12Q9HB09 334 aa12.39□□□□□ -0.43
SGIP1-213ENST00000493564 CD2APQ9Y5K6 639 aa12.39□□□□□ -0.43
SGIP1-213ENST00000493564 A0A087WZG4 1122 aa12.38□□□□□ -0.43
SGIP1-213ENST00000493564 NBPF26B4DH59 902 aa12.38□□□□□ -0.43
SGIP1-213ENST00000493564 GIGYF1O75420 1035 aaPredicted RBP12.38□□□□□ -0.43
SGIP1-213ENST00000493564 IL6STP40189 918 aaPredicted RBP12.38□□□□□ -0.43
SGIP1-213ENST00000493564 DDR1Q08345 913 aa12.38□□□□□ -0.43
SGIP1-213ENST00000493564 NBPF10Q6P3W6 841 aaKnown RBP12.38□□□□□ -0.43
SGIP1-213ENST00000493564 NBPF15Q8N660 670 aa12.38□□□□□ -0.43
SGIP1-213ENST00000493564 TM4SF1P30408 202 aa12.37□□□□□ -0.43
SGIP1-213ENST00000493564 NFIXQ14938 502 aa12.37□□□□□ -0.43
SGIP1-213ENST00000493564 A0A0G2JLW4 131 aa12.36□□□□□ -0.43
SGIP1-213ENST00000493564 MYL6BP14649 208 aa12.36□□□□□ -0.43
SGIP1-213ENST00000493564 YBX3P16989 372 aaKnown RBP eCLIP12.36□□□□□ -0.43
SGIP1-213ENST00000493564 EIF2S2P20042 333 aaKnown RBP12.36□□□□□ -0.43
SGIP1-213ENST00000493564 KRT24Q2M2I5 525 aa12.36□□□□□ -0.43
SGIP1-213ENST00000493564 NECTIN2Q92692 538 aa12.36□□□□□ -0.43
SGIP1-213ENST00000493564 C4AP0C0L4 1744 aa12.36□□□□□ -0.43
SGIP1-213ENST00000493564 CICQ96RK0 1608 aaPredicted RBP12.36□□□□□ -0.43
SGIP1-213ENST00000493564 POLRMTO00411 1230 aaKnown RBP12.35□□□□□ -0.43
SGIP1-213ENST00000493564 CHL1O00533 1208 aa12.35□□□□□ -0.43
SGIP1-213ENST00000493564 TBC1D9BQ66K14 1250 aa12.35□□□□□ -0.43
SGIP1-213ENST00000493564 DZIP3Q86Y13 1208 aaKnown RBP12.35□□□□□ -0.43
SGIP1-213ENST00000493564 FAM9BQ8IZU0 186 aa12.35□□□□□ -0.43
SGIP1-213ENST00000493564 SALL2Q9Y467 1007 aaPredicted RBP12.35□□□□□ -0.43
SGIP1-213ENST00000493564 GOLGB1Q14789 3259 aaKnown RBP12.35□□□□□ -0.43
SGIP1-213ENST00000493564 CAMTA2O94983 1202 aa12.34□□□□□ -0.43
SGIP1-213ENST00000493564 CCDC24Q8N4L8 307 aa12.34□□□□□ -0.43
SGIP1-213ENST00000493564 ANXA1P04083 346 aa12.33□□□□□ -0.44
SGIP1-213ENST00000493564 SERPINB2P05120 415 aa12.33□□□□□ -0.44
SGIP1-213ENST00000493564 DPEP1P16444 411 aa12.33□□□□□ -0.44
SGIP1-213ENST00000493564 YY1P25490 414 aa12.33□□□□□ -0.44
SGIP1-213ENST00000493564 BABAM1Q9NWV8 329 aa12.33□□□□□ -0.44
SGIP1-213ENST00000493564 CHRNA5P30532 468 aa12.32□□□□□ -0.44
SGIP1-213ENST00000493564 TGFB2P61812 414 aa12.32□□□□□ -0.44
SGIP1-213ENST00000493564 HLFQ16534 295 aa12.32□□□□□ -0.44
SGIP1-213ENST00000493564 CFAP44Q96MT7 982 aa12.32□□□□□ -0.44
SGIP1-213ENST00000493564 MBIPQ9NS73 344 aa12.32□□□□□ -0.44
SGIP1-213ENST00000493564 KDM3BQ7LBC6 1761 aa12.31□□□□□ -0.44
SGIP1-213ENST00000493564 FAM177BA6PVY3 158 aa12.31□□□□□ -0.44
SGIP1-213ENST00000493564 ELL2O00472 640 aaPredicted RBP12.31□□□□□ -0.44
SGIP1-213ENST00000493564 PROSER3Q2NL68 480 aa12.31□□□□□ -0.44
SGIP1-213ENST00000493564 TTLL7Q6ZT98 887 aa12.31□□□□□ -0.44
SGIP1-213ENST00000493564 SETDB2Q96T68 719 aa12.31□□□□□ -0.44
SGIP1-213ENST00000493564 KCNA3P22001 575 aa12.3□□□□□ -0.44
SGIP1-213ENST00000493564 PDIA6Q15084 440 aa12.3□□□□□ -0.44
SGIP1-213ENST00000493564 BCS1LQ9Y276 419 aa12.3□□□□□ -0.44
SGIP1-213ENST00000493564 C10orf71Q711Q0 1435 aa12.29□□□□□ -0.44
SGIP1-213ENST00000493564 GRIN3BO60391 1043 aa12.29□□□□□ -0.44
SGIP1-213ENST00000493564 ZNF853P0CG23 659 aa12.29□□□□□ -0.44
SGIP1-213ENST00000493564 AIMP1Q12904 312 aaKnown RBP12.29□□□□□ -0.44
SGIP1-213ENST00000493564 DUSP27Q5VZP5 1158 aa12.29□□□□□ -0.44
SGIP1-213ENST00000493564 ZBTB3Q9H5J0 574 aa12.29□□□□□ -0.44
SGIP1-213ENST00000493564 NIP7Q9Y221 180 aaKnown RBP eCLIP12.29□□□□□ -0.44
SGIP1-213ENST00000493564 PXDNLA1KZ92 1463 aa12.28□□□□□ -0.44
SGIP1-213ENST00000493564 N4BP2Q86UW6 1770 aaPredicted RBP12.28□□□□□ -0.44
SGIP1-213ENST00000493564 NPHP1O15259 732 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms