RNA–Protein interactions for RNA: ENST00000493378.1

ARF4-207, Transcript of ADP ribosylation factor 4, humanhuman

TSL 3

Gene ARF4, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF4-207ENST00000493378 UBR3Q6ZT12 1888 aa14.05□□□□□ -0.16
ARF4-207ENST00000493378 GNPATO15228 680 aa14.04□□□□□ -0.16
ARF4-207ENST00000493378 RPS6KA4O75676 772 aa14.04□□□□□ -0.16
ARF4-207ENST00000493378 INTS5Q6P9B9 1019 aaKnown RBP14.04□□□□□ -0.16
ARF4-207ENST00000493378 SLC16A10Q8TF71 515 aa14.04□□□□□ -0.16
ARF4-207ENST00000493378 MBIPQ9NS73 344 aa14.04□□□□□ -0.16
ARF4-207ENST00000493378 RTCBQ9Y3I0 505 aaKnown RBP14.04□□□□□ -0.16
ARF4-207ENST00000493378 ERBB4Q15303 1308 aa14.03□□□□□ -0.16
ARF4-207ENST00000493378 MYH14Q7Z406 1995 aaKnown RBP14.02□□□□□ -0.16
ARF4-207ENST00000493378 PSDA5PKW4 1024 aaPredicted RBP14.02□□□□□ -0.17
ARF4-207ENST00000493378 LAS1LQ9Y4W2 734 aaKnown RBP14.02□□□□□ -0.17
ARF4-207ENST00000493378 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.01□□□□□ -0.17
ARF4-207ENST00000493378 IL6STP40189 918 aaPredicted RBP14.01□□□□□ -0.17
ARF4-207ENST00000493378 CHMP4AQ9BY43 222 aa14.01□□□□□ -0.17
ARF4-207ENST00000493378 MYH16Q9H6N6 1097 aa14.01□□□□□ -0.17
ARF4-207ENST00000493378 ZBTB1Q9Y2K1 713 aa14.01□□□□□ -0.17
ARF4-207ENST00000493378 USP16Q9Y5T5 823 aa14.01□□□□□ -0.17
ARF4-207ENST00000493378 PRAMEF22A3QJZ6 481 aa14□□□□□ -0.17
ARF4-207ENST00000493378 EIF5P55010 431 aaKnown RBP14□□□□□ -0.17
ARF4-207ENST00000493378 TRAPPC3LQ5T215 181 aa14□□□□□ -0.17
ARF4-207ENST00000493378 AMIGO3Q86WK7 504 aa14□□□□□ -0.17
ARF4-207ENST00000493378 COL23A1Q86Y22 540 aaPredicted RBP14□□□□□ -0.17
ARF4-207ENST00000493378 MTFR1LQ9H019 292 aa14□□□□□ -0.17
ARF4-207ENST00000493378 COL15A1P39059 1388 aa13.99□□□□□ -0.17
ARF4-207ENST00000493378 COL24A1Q17RW2 1714 aa13.99□□□□□ -0.17
ARF4-207ENST00000493378 FANCIQ9NVI1 1328 aa13.99□□□□□ -0.17
ARF4-207ENST00000493378 A0A087WZG4 1122 aa13.99□□□□□ -0.17
ARF4-207ENST00000493378 RGL2O15211 777 aa13.99□□□□□ -0.17
ARF4-207ENST00000493378 SALL2Q9Y467 1007 aaPredicted RBP13.99□□□□□ -0.17
ARF4-207ENST00000493378 LRP5O75197 1615 aa13.99□□□□□ -0.17
ARF4-207ENST00000493378 E9PSI1 815 aa13.98□□□□□ -0.17
ARF4-207ENST00000493378 GOLGA2Q08379 1002 aa13.98□□□□□ -0.17
ARF4-207ENST00000493378 ARHGEF1Q92888 912 aaKnown RBP13.98□□□□□ -0.17
ARF4-207ENST00000493378 C4AP0C0L4 1744 aa13.98□□□□□ -0.17
ARF4-207ENST00000493378 SENP3-EIF4A1A0A087X0R7 540 aa13.97□□□□□ -0.17
ARF4-207ENST00000493378 PHF14O94880 888 aa13.97□□□□□ -0.17
ARF4-207ENST00000493378 A1BGP04217 495 aa13.97□□□□□ -0.17
ARF4-207ENST00000493378 DUSP27Q5VZP5 1158 aa13.97□□□□□ -0.17
ARF4-207ENST00000493378 TSR2Q969E8 191 aaKnown RBP13.97□□□□□ -0.17
ARF4-207ENST00000493378 PDGFDQ9GZP0 370 aaPredicted RBP13.97□□□□□ -0.17
ARF4-207ENST00000493378 USP42Q9H9J4 1324 aaKnown RBP13.96□□□□□ -0.17
ARF4-207ENST00000493378 CANXP27824 592 aaKnown RBP13.96□□□□□ -0.17
ARF4-207ENST00000493378 RFC4P35249 363 aa13.96□□□□□ -0.17
ARF4-207ENST00000493378 KRT24Q2M2I5 525 aa13.96□□□□□ -0.17
ARF4-207ENST00000493378 SPON1Q9HCB6 807 aa13.96□□□□□ -0.17
ARF4-207ENST00000493378 SPINK5Q9NQ38 1064 aaPredicted RBP13.96□□□□□ -0.17
ARF4-207ENST00000493378 ZBED9Q6R2W3 1325 aa13.95□□□□□ -0.18
ARF4-207ENST00000493378 NBPF26B4DH59 902 aa13.95□□□□□ -0.18
ARF4-207ENST00000493378 SLFN5Q08AF3 891 aa13.95□□□□□ -0.18
ARF4-207ENST00000493378 HDGFL1Q5TGJ6 251 aa13.95□□□□□ -0.18
ARF4-207ENST00000493378 NBPF10Q6P3W6 841 aaKnown RBP13.95□□□□□ -0.18
ARF4-207ENST00000493378 NBPF15Q8N660 670 aa13.95□□□□□ -0.18
ARF4-207ENST00000493378 NARFQ9UHQ1 456 aa13.95□□□□□ -0.18
ARF4-207ENST00000493378 SCN7AQ01118 1682 aa13.95□□□□□ -0.18
ARF4-207ENST00000493378 HNRNPUQ00839 825 aaKnown RBP eCLIP13.94□□□□□ -0.18
ARF4-207ENST00000493378 PDIA6Q15084 440 aa13.94□□□□□ -0.18
ARF4-207ENST00000493378 LRP10Q7Z4F1 713 aa13.94□□□□□ -0.18
ARF4-207ENST00000493378 NPM2Q86SE8 214 aaKnown RBP13.94□□□□□ -0.18
ARF4-207ENST00000493378 TRMT2AQ8IZ69 625 aaKnown RBP13.94□□□□□ -0.18
ARF4-207ENST00000493378 C8orf58Q8NAV2 365 aa13.94□□□□□ -0.18
ARF4-207ENST00000493378 SGIP1Q9BQI5 828 aa13.94□□□□□ -0.18
ARF4-207ENST00000493378 DDX21Q9NR30 783 aaKnown RBP eCLIP13.94□□□□□ -0.18
ARF4-207ENST00000493378 DBF4Q9UBU7 674 aaPredicted RBP13.94□□□□□ -0.18
ARF4-207ENST00000493378 MSH5O43196 834 aa13.93□□□□□ -0.18
ARF4-207ENST00000493378 ZPR1O75312 459 aa13.93□□□□□ -0.18
ARF4-207ENST00000493378 ZBTB7AO95365 584 aa13.93□□□□□ -0.18
ARF4-207ENST00000493378 GYS1P13807 737 aa13.93□□□□□ -0.18
ARF4-207ENST00000493378 PTGER2P43116 358 aa13.93□□□□□ -0.18
ARF4-207ENST00000493378 TWISTNBQ3B726 338 aaPredicted RBP13.93□□□□□ -0.18
ARF4-207ENST00000493378 NLGN1Q8N2Q7 840 aa13.93□□□□□ -0.18
ARF4-207ENST00000493378 BCORQ6W2J9 1755 aa13.92□□□□□ -0.18
ARF4-207ENST00000493378 EIF2S2P20042 333 aaKnown RBP13.92□□□□□ -0.18
ARF4-207ENST00000493378 CCDC30Q5VVM6 783 aa13.92□□□□□ -0.18
ARF4-207ENST00000493378 SMIM5Q71RC9 77 aa13.92□□□□□ -0.18
ARF4-207ENST00000493378 ERVV-1B6SEH8 477 aa13.91□□□□□ -0.18
ARF4-207ENST00000493378 CAMTA2O94983 1202 aa13.91□□□□□ -0.18
ARF4-207ENST00000493378 CT47B1P0C2W7 299 aaPredicted RBP13.91□□□□□ -0.18
ARF4-207ENST00000493378 POLD1P28340 1107 aa13.91□□□□□ -0.18
ARF4-207ENST00000493378 EXOSC9Q06265 439 aaKnown RBP13.91□□□□□ -0.18
ARF4-207ENST00000493378 USPL1Q5W0Q7 1092 aa13.91□□□□□ -0.18
ARF4-207ENST00000493378 CLEC4GQ6UXB4 293 aa13.91□□□□□ -0.18
ARF4-207ENST00000493378 DZIP3Q86Y13 1208 aaKnown RBP13.91□□□□□ -0.18
ARF4-207ENST00000493378 TSPYL6Q8N831 410 aa13.91□□□□□ -0.18
ARF4-207ENST00000493378 ZNF428Q96B54 188 aa13.91□□□□□ -0.18
ARF4-207ENST00000493378 HYPKQ9NX55 129 aa13.91□□□□□ -0.18
ARF4-207ENST00000493378 CHPF2Q9P2E5 772 aa13.91□□□□□ -0.18
ARF4-207ENST00000493378 SRCAPQ6ZRS2 3230 aa13.9□□□□□ -0.18
ARF4-207ENST00000493378 VAMP4O75379 141 aa13.9□□□□□ -0.18
ARF4-207ENST00000493378 PIP4K2AP48426 406 aaPredicted RBP13.9□□□□□ -0.18
ARF4-207ENST00000493378 BCL2L12Q9HB09 334 aa13.9□□□□□ -0.18
ARF4-207ENST00000493378 SRP68Q9UHB9 627 aaKnown RBP13.9□□□□□ -0.18
ARF4-207ENST00000493378 ZNF652Q9Y2D9 606 aa13.9□□□□□ -0.18
ARF4-207ENST00000493378 ELL2O00472 640 aaPredicted RBP13.89□□□□□ -0.19
ARF4-207ENST00000493378 MYL6BP14649 208 aa13.89□□□□□ -0.19
ARF4-207ENST00000493378 PROSER3Q2NL68 480 aa13.89□□□□□ -0.19
ARF4-207ENST00000493378 KIF6Q6ZMV9 814 aa13.89□□□□□ -0.19
ARF4-207ENST00000493378 CDCA7LQ96GN5 454 aa13.89□□□□□ -0.19
ARF4-207ENST00000493378 ATF5Q9Y2D1 282 aaPredicted RBP13.89□□□□□ -0.19
ARF4-207ENST00000493378 ZNF330Q9Y3S2 320 aaPredicted RBP13.89□□□□□ -0.19
ARF4-207ENST00000493378 ATP10DQ9P241 1426 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 293 ms