RNA–Protein interactions for RNA: ENST00000492571.1

TNFRSF9-203, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-203ENST00000492571 MKRN3Q13064 507 aaKnown RBP13.52□□□□□ -0.25
TNFRSF9-203ENST00000492571 ARHGAP27Q6ZUM4 889 aa13.52□□□□□ -0.25
TNFRSF9-203ENST00000492571 IFNL2Q8IZJ0 200 aa13.52□□□□□ -0.25
TNFRSF9-203ENST00000492571 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.52□□□□□ -0.25
TNFRSF9-203ENST00000492571 RTCBQ9Y3I0 505 aaKnown RBP13.52□□□□□ -0.25
TNFRSF9-203ENST00000492571 SMIM5Q71RC9 77 aa13.51□□□□□ -0.25
TNFRSF9-203ENST00000492571 LINC00116Q8NCU8 138 aa13.51□□□□□ -0.25
TNFRSF9-203ENST00000492571 GOLGA2Q08379 1002 aa13.5□□□□□ -0.25
TNFRSF9-203ENST00000492571 CCDC87Q9NVE4 849 aa13.5□□□□□ -0.25
TNFRSF9-203ENST00000492571 TUBGCP6Q96RT7 1819 aa13.5□□□□□ -0.25
TNFRSF9-203ENST00000492571 A0A0G2JLW4 131 aa13.49□□□□□ -0.25
TNFRSF9-203ENST00000492571 FCHSD2O94868 740 aa13.49□□□□□ -0.25
TNFRSF9-203ENST00000492571 RFC4P35249 363 aa13.49□□□□□ -0.25
TNFRSF9-203ENST00000492571 AMIGO3Q86WK7 504 aa13.49□□□□□ -0.25
TNFRSF9-203ENST00000492571 ASAP1Q9ULH1 1129 aa13.49□□□□□ -0.25
TNFRSF9-203ENST00000492571 PARP3Q9Y6F1 533 aa13.49□□□□□ -0.25
TNFRSF9-203ENST00000492571 C5P01031 1676 aa13.49□□□□□ -0.25
TNFRSF9-203ENST00000492571 EMILIN1Q9Y6C2 1016 aa13.48□□□□□ -0.25
TNFRSF9-203ENST00000492571 HSP90AB1P08238 724 aaKnown RBP13.47□□□□□ -0.25
TNFRSF9-203ENST00000492571 ITPK1Q13572 414 aa13.47□□□□□ -0.25
TNFRSF9-203ENST00000492571 C4BP0C0L5 1744 aa13.47□□□□□ -0.25
TNFRSF9-203ENST00000492571 WASHC2AQ641Q2 1341 aa13.46□□□□□ -0.25
TNFRSF9-203ENST00000492571 PHKG2P15735 406 aa13.46□□□□□ -0.25
TNFRSF9-203ENST00000492571 ATG3Q9NT62 314 aa13.46□□□□□ -0.25
TNFRSF9-203ENST00000492571 KDM2BQ8NHM5 1336 aa13.45□□□□□ -0.26
TNFRSF9-203ENST00000492571 RC3H1Q5TC82 1133 aaKnown RBP13.45□□□□□ -0.26
TNFRSF9-203ENST00000492571 RBM46Q8TBY0 533 aaKnown RBP13.45□□□□□ -0.26
TNFRSF9-203ENST00000492571 ARHGEF1Q92888 912 aaKnown RBP13.45□□□□□ -0.26
TNFRSF9-203ENST00000492571 EYA1Q99502 592 aa13.45□□□□□ -0.26
TNFRSF9-203ENST00000492571 PIM2Q9P1W9 311 aa13.45□□□□□ -0.26
TNFRSF9-203ENST00000492571 ERVV-2B6SEH9 535 aa13.44□□□□□ -0.26
TNFRSF9-203ENST00000492571 DPEP1P16444 411 aa13.44□□□□□ -0.26
TNFRSF9-203ENST00000492571 FSTL1Q12841 308 aa13.44□□□□□ -0.26
TNFRSF9-203ENST00000492571 DNAJC5GQ8N7S2 189 aa13.44□□□□□ -0.26
TNFRSF9-203ENST00000492571 NMRK2Q9NPI5 230 aa13.44□□□□□ -0.26
TNFRSF9-203ENST00000492571 RGPD2P0DJD1 1756 aa13.43□□□□□ -0.26
TNFRSF9-203ENST00000492571 RPS6KA4O75676 772 aa13.43□□□□□ -0.26
TNFRSF9-203ENST00000492571 CABP4P57796 275 aa13.43□□□□□ -0.26
TNFRSF9-203ENST00000492571 C9orf131Q5VYM1 1079 aa13.43□□□□□ -0.26
TNFRSF9-203ENST00000492571 DCAF5Q96JK2 942 aa13.43□□□□□ -0.26
TNFRSF9-203ENST00000492571 GYS1P13807 737 aa13.42□□□□□ -0.26
TNFRSF9-203ENST00000492571 PLEKHO1Q53GL0 409 aaPredicted RBP13.42□□□□□ -0.26
TNFRSF9-203ENST00000492571 DALRD3Q5D0E6 543 aaKnown RBP13.42□□□□□ -0.26
TNFRSF9-203ENST00000492571 DPY19L2Q6NUT2 758 aa13.42□□□□□ -0.26
TNFRSF9-203ENST00000492571 CARD14Q9BXL6 1004 aa13.42□□□□□ -0.26
TNFRSF9-203ENST00000492571 PLSCR2Q9NRY7 297 aa13.42□□□□□ -0.26
TNFRSF9-203ENST00000492571 PLEKHG2Q9H7P9 1386 aa13.42□□□□□ -0.26
TNFRSF9-203ENST00000492571 PXDNLA1KZ92 1463 aa13.42□□□□□ -0.26
TNFRSF9-203ENST00000492571 RNF25Q96BH1 459 aaPredicted RBP13.41□□□□□ -0.26
TNFRSF9-203ENST00000492571 KLRG1Q96E93 195 aa13.41□□□□□ -0.26
TNFRSF9-203ENST00000492571 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.41□□□□□ -0.26
TNFRSF9-203ENST00000492571 CNTNAP4Q9C0A0 1308 aa13.4□□□□□ -0.26
TNFRSF9-203ENST00000492571 AMOTQ4VCS5 1084 aa13.4□□□□□ -0.26
TNFRSF9-203ENST00000492571 C1orf141Q5JVX7 400 aa13.4□□□□□ -0.26
TNFRSF9-203ENST00000492571 POLKQ9UBT6 870 aa13.4□□□□□ -0.26
TNFRSF9-203ENST00000492571 TAF1LQ8IZX4 1826 aa13.39□□□□□ -0.27
TNFRSF9-203ENST00000492571 TNNT2P45379 298 aaPredicted RBP13.39□□□□□ -0.27
TNFRSF9-203ENST00000492571 MTHFSP49914 203 aa13.39□□□□□ -0.27
TNFRSF9-203ENST00000492571 RNF181Q9P0P0 153 aa13.39□□□□□ -0.27
TNFRSF9-203ENST00000492571 C10orf71Q711Q0 1435 aa13.39□□□□□ -0.27
TNFRSF9-203ENST00000492571 PTCD1O75127 700 aaKnown RBP13.38□□□□□ -0.27
TNFRSF9-203ENST00000492571 EIF4A2Q14240 407 aaKnown RBP13.38□□□□□ -0.27
TNFRSF9-203ENST00000492571 SMC1BQ8NDV3 1235 aa13.38□□□□□ -0.27
TNFRSF9-203ENST00000492571 POLR3GLQ9BT43 218 aa13.38□□□□□ -0.27
TNFRSF9-203ENST00000492571 RRAGCQ9HB90 399 aa13.38□□□□□ -0.27
TNFRSF9-203ENST00000492571 NCAPD2Q15021 1401 aa13.38□□□□□ -0.27
TNFRSF9-203ENST00000492571 UBR3Q6ZT12 1888 aa13.38□□□□□ -0.27
TNFRSF9-203ENST00000492571 ST18O60284 1047 aa13.37□□□□□ -0.27
TNFRSF9-203ENST00000492571 ZPR1O75312 459 aa13.37□□□□□ -0.27
TNFRSF9-203ENST00000492571 ZNF530Q6P9A1 599 aaPredicted RBP13.37□□□□□ -0.27
TNFRSF9-203ENST00000492571 L3MBTL3Q96JM7 780 aaPredicted RBP13.37□□□□□ -0.27
TNFRSF9-203ENST00000492571 CICQ96RK0 1608 aaPredicted RBP13.37□□□□□ -0.27
TNFRSF9-203ENST00000492571 KCNA3P22001 575 aa13.36□□□□□ -0.27
TNFRSF9-203ENST00000492571 TNS4Q8IZW8 715 aa13.36□□□□□ -0.27
TNFRSF9-203ENST00000492571 JMYQ8N9B5 988 aa13.36□□□□□ -0.27
TNFRSF9-203ENST00000492571 SLC4A9Q96Q91 983 aa13.36□□□□□ -0.27
TNFRSF9-203ENST00000492571 ITGB4P16144 1822 aa13.35□□□□□ -0.27
TNFRSF9-203ENST00000492571 CRKLP46109 303 aaKnown RBP13.35□□□□□ -0.27
TNFRSF9-203ENST00000492571 HTRA3P83110 453 aa13.35□□□□□ -0.27
TNFRSF9-203ENST00000492571 COL13A1Q5TAT6 717 aaPredicted RBP13.35□□□□□ -0.27
TNFRSF9-203ENST00000492571 KDRP35968 1356 aa13.34□□□□□ -0.27
TNFRSF9-203ENST00000492571 PKD1L3Q7Z443 1732 aa13.34□□□□□ -0.27
TNFRSF9-203ENST00000492571 TOGARAM1Q9Y4F4 1720 aa13.34□□□□□ -0.27
TNFRSF9-203ENST00000492571 EFCAB3Q8N7B9 438 aa13.34□□□□□ -0.27
TNFRSF9-203ENST00000492571 NFATC2IPQ8NCF5 419 aa13.34□□□□□ -0.27
TNFRSF9-203ENST00000492571 ZC3H4Q9UPT8 1303 aaKnown RBP13.34□□□□□ -0.27
TNFRSF9-203ENST00000492571 VEGFAP15692 232 aaPredicted RBP13.33□□□□□ -0.28
TNFRSF9-203ENST00000492571 SRP68Q9UHB9 627 aaKnown RBP13.33□□□□□ -0.28
TNFRSF9-203ENST00000492571 USP42Q9H9J4 1324 aaKnown RBP13.33□□□□□ -0.28
TNFRSF9-203ENST00000492571 RIOK3O14730 519 aaKnown RBP13.32□□□□□ -0.28
TNFRSF9-203ENST00000492571 CHRNA5P30532 468 aa13.32□□□□□ -0.28
TNFRSF9-203ENST00000492571 C3orf67Q6ZVT6 689 aa13.32□□□□□ -0.28
TNFRSF9-203ENST00000492571 MAP2P11137 1827 aaKnown RBP13.32□□□□□ -0.28
TNFRSF9-203ENST00000492571 KCPQ6ZWJ8 1503 aa13.31□□□□□ -0.28
TNFRSF9-203ENST00000492571 LMNB1P20700 586 aa13.31□□□□□ -0.28
TNFRSF9-203ENST00000492571 PCDH10Q9P2E7 1040 aa13.31□□□□□ -0.28
TNFRSF9-203ENST00000492571 KIF20BQ96Q89 1820 aa13.31□□□□□ -0.28
TNFRSF9-203ENST00000492571 GLTPD2A6NH11 291 aa13.3□□□□□ -0.28
TNFRSF9-203ENST00000492571 POLRMTO00411 1230 aaKnown RBP13.3□□□□□ -0.28
TNFRSF9-203ENST00000492571 TM4SF1P30408 202 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms