RNA–Protein interactions for RNA: ENST00000492451.1

PTPN7-215, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5

Gene PTPN7, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-215ENST00000492451 ADRA2BP18089 450 aa18.13■□□□□ 0.49
PTPN7-215ENST00000492451 THUMPD2Q9BTF0 503 aaKnown RBP18.13■□□□□ 0.49
PTPN7-215ENST00000492451 MYH14Q7Z406 1995 aaKnown RBP18.12■□□□□ 0.49
PTPN7-215ENST00000492451 TRAPPC3LQ5T215 181 aa18.12■□□□□ 0.49
PTPN7-215ENST00000492451 CCDC87Q9NVE4 849 aa18.12■□□□□ 0.49
PTPN7-215ENST00000492451 BABAM1Q9NWV8 329 aa18.12■□□□□ 0.49
PTPN7-215ENST00000492451 APAF1O14727 1248 aa18.11■□□□□ 0.49
PTPN7-215ENST00000492451 KCNQ3O43525 872 aa18.11■□□□□ 0.49
PTPN7-215ENST00000492451 KDM3BQ7LBC6 1761 aa18.1■□□□□ 0.49
PTPN7-215ENST00000492451 INTS5Q6P9B9 1019 aaKnown RBP18.1■□□□□ 0.49
PTPN7-215ENST00000492451 TRIM35Q9UPQ4 493 aa18.1■□□□□ 0.49
PTPN7-215ENST00000492451 SNRPA1P09661 255 aaKnown RBP18.09■□□□□ 0.49
PTPN7-215ENST00000492451 MIS18AQ9NYP9 233 aa18.09■□□□□ 0.49
PTPN7-215ENST00000492451 YBX3P16989 372 aaKnown RBP eCLIP18.08■□□□□ 0.483e-8■□□□□ 10.5
PTPN7-215ENST00000492451 RFC4P35249 363 aa18.08■□□□□ 0.48
PTPN7-215ENST00000492451 CALD1Q05682 793 aaKnown RBP18.08■□□□□ 0.48
PTPN7-215ENST00000492451 GPR162Q16538 588 aa18.08■□□□□ 0.48
PTPN7-215ENST00000492451 PELP1Q8IZL8 1130 aaKnown RBP18.07■□□□□ 0.48
PTPN7-215ENST00000492451 ARHGEF1Q92888 912 aaKnown RBP18.07■□□□□ 0.48
PTPN7-215ENST00000492451 TSPYL4Q9UJ04 414 aa18.07■□□□□ 0.48
PTPN7-215ENST00000492451 GOLGB1Q14789 3259 aaKnown RBP18.06■□□□□ 0.48
PTPN7-215ENST00000492451 SOS1Q07889 1333 aaPredicted RBP18.05■□□□□ 0.48
PTPN7-215ENST00000492451 EIF4A1P60842 406 aaKnown RBP18.05■□□□□ 0.48
PTPN7-215ENST00000492451 NCBP3Q53F19 620 aaKnown RBP18.05■□□□□ 0.48
PTPN7-215ENST00000492451 ZBTB1Q9Y2K1 713 aa18.05■□□□□ 0.48
PTPN7-215ENST00000492451 CD2APQ9Y5K6 639 aa18.05■□□□□ 0.48
PTPN7-215ENST00000492451 CCER2I3L3R5 266 aa18.04■□□□□ 0.48
PTPN7-215ENST00000492451 CANXP27824 592 aaKnown RBP18.04■□□□□ 0.48
PTPN7-215ENST00000492451 DIEXFQ68CQ4 756 aaKnown RBP18.04■□□□□ 0.48
PTPN7-215ENST00000492451 FAM9BQ8IZU0 186 aa18.04■□□□□ 0.48
PTPN7-215ENST00000492451 NLGN1Q8N2Q7 840 aa18.04■□□□□ 0.48
PTPN7-215ENST00000492451 USP16Q9Y5T5 823 aa18.04■□□□□ 0.48
PTPN7-215ENST00000492451 C4AP0C0L4 1744 aa18.03■□□□□ 0.48
PTPN7-215ENST00000492451 A0A087WZG4 1122 aa18.03■□□□□ 0.48
PTPN7-215ENST00000492451 CHL1O00533 1208 aa18.03■□□□□ 0.48
PTPN7-215ENST00000492451 GIGYF1O75420 1035 aaPredicted RBP18.03■□□□□ 0.48
PTPN7-215ENST00000492451 MMP10P09238 476 aa18.03■□□□□ 0.48
PTPN7-215ENST00000492451 GYS1P13807 737 aa18.03■□□□□ 0.48
PTPN7-215ENST00000492451 IL6STP40189 918 aaPredicted RBP18.03■□□□□ 0.48
PTPN7-215ENST00000492451 CCDC27Q2M243 656 aa18.03■□□□□ 0.48
PTPN7-215ENST00000492451 NPM2Q86SE8 214 aaKnown RBP18.03■□□□□ 0.48
PTPN7-215ENST00000492451 LAS1LQ9Y4W2 734 aaKnown RBP18.03■□□□□ 0.48
PTPN7-215ENST00000492451 COL15A1P39059 1388 aa18.03■□□□□ 0.48
PTPN7-215ENST00000492451 USP42Q9H9J4 1324 aaKnown RBP18.02■□□□□ 0.48
PTPN7-215ENST00000492451 ZPR1O75312 459 aa18.02■□□□□ 0.48
PTPN7-215ENST00000492451 EIF5P55010 431 aaKnown RBP18.02■□□□□ 0.48
PTPN7-215ENST00000492451 CFAP44Q96MT7 982 aa18.02■□□□□ 0.48
PTPN7-215ENST00000492451 SRP68Q9UHB9 627 aaKnown RBP18.02■□□□□ 0.48
PTPN7-215ENST00000492451 WWC3Q9ULE0 1092 aa18.02■□□□□ 0.48
PTPN7-215ENST00000492451 LAMB4A4D0S4 1761 aa18.02■□□□□ 0.47
PTPN7-215ENST00000492451 PRAMEF22A3QJZ6 481 aa18.01■□□□□ 0.47
PTPN7-215ENST00000492451 A1BGP04217 495 aa18.01■□□□□ 0.47
PTPN7-215ENST00000492451 NGEFQ8N5V2 710 aa18.01■□□□□ 0.47
PTPN7-215ENST00000492451 ZNF784Q8NCA9 323 aaPredicted RBP18.01■□□□□ 0.47
PTPN7-215ENST00000492451 GNAI1P63096 354 aa18■□□□□ 0.47
PTPN7-215ENST00000492451 IFT57Q9NWB7 429 aa18■□□□□ 0.47
PTPN7-215ENST00000492451 NARFQ9UHQ1 456 aa18■□□□□ 0.47
PTPN7-215ENST00000492451 ZNF853P0CG23 659 aa17.98■□□□□ 0.47
PTPN7-215ENST00000492451 FKBP8Q14318 412 aa17.98■□□□□ 0.47
PTPN7-215ENST00000492451 WWC1Q8IX03 1113 aa17.98■□□□□ 0.47
PTPN7-215ENST00000492451 ZNF330Q9Y3S2 320 aaPredicted RBP17.98■□□□□ 0.47
PTPN7-215ENST00000492451 USPL1Q5W0Q7 1092 aa17.97■□□□□ 0.47
PTPN7-215ENST00000492451 ERBB4Q15303 1308 aa17.97■□□□□ 0.47
PTPN7-215ENST00000492451 CHD4Q14839 1912 aa17.96■□□□□ 0.47
PTPN7-215ENST00000492451 KIAA1551Q9HCM1 1747 aa17.96■□□□□ 0.47
PTPN7-215ENST00000492451 DDR1Q08345 913 aa17.96■□□□□ 0.47
PTPN7-215ENST00000492451 MBIPQ9NS73 344 aa17.96■□□□□ 0.47
PTPN7-215ENST00000492451 C10orf71Q711Q0 1435 aa17.96■□□□□ 0.47
PTPN7-215ENST00000492451 IL16Q14005 1332 aa17.96■□□□□ 0.46
PTPN7-215ENST00000492451 PXDNLA1KZ92 1463 aa17.95■□□□□ 0.46
PTPN7-215ENST00000492451 NBPF26B4DH59 902 aa17.95■□□□□ 0.46
PTPN7-215ENST00000492451 NBPF10Q6P3W6 841 aaKnown RBP17.95■□□□□ 0.46
PTPN7-215ENST00000492451 NBPF15Q8N660 670 aa17.95■□□□□ 0.46
PTPN7-215ENST00000492451 PARP3Q9Y6F1 533 aa17.95■□□□□ 0.46
PTPN7-215ENST00000492451 HOXB7P09629 217 aa17.94■□□□□ 0.46
PTPN7-215ENST00000492451 DZIP3Q86Y13 1208 aaKnown RBP17.94■□□□□ 0.46
PTPN7-215ENST00000492451 TBC1D2BQ9UPU7 963 aa17.94■□□□□ 0.46
PTPN7-215ENST00000492451 SENP3-EIF4A1A0A087X0R7 540 aa17.93■□□□□ 0.46
PTPN7-215ENST00000492451 GRIN3BO60391 1043 aa17.93■□□□□ 0.46
PTPN7-215ENST00000492451 PIP4K2AP48426 406 aaPredicted RBP17.93■□□□□ 0.46
PTPN7-215ENST00000492451 WDR63Q8IWG1 891 aa17.93■□□□□ 0.46
PTPN7-215ENST00000492451 A0A0G2JLW4 131 aa17.92■□□□□ 0.46
PTPN7-215ENST00000492451 RGL2O15211 777 aa17.92■□□□□ 0.46
PTPN7-215ENST00000492451 EIF2S2P20042 333 aaKnown RBP17.92■□□□□ 0.46
PTPN7-215ENST00000492451 TM4SF1P30408 202 aa17.92■□□□□ 0.46
PTPN7-215ENST00000492451 CHMP4AQ9BY43 222 aa17.92■□□□□ 0.46
PTPN7-215ENST00000492451 BCL2L12Q9HB09 334 aa17.92■□□□□ 0.46
PTPN7-215ENST00000492451 SALL2Q9Y467 1007 aaPredicted RBP17.92■□□□□ 0.46
PTPN7-215ENST00000492451 KIF13BQ9NQT8 1826 aa17.92■□□□□ 0.46
PTPN7-215ENST00000492451 SCN7AQ01118 1682 aa17.92■□□□□ 0.46
PTPN7-215ENST00000492451 MIER1Q8N108 512 aa17.91■□□□□ 0.46
PTPN7-215ENST00000492451 ZNF652Q9Y2D9 606 aa17.91■□□□□ 0.46
PTPN7-215ENST00000492451 N4BP2Q86UW6 1770 aaPredicted RBP17.9■□□□□ 0.46
PTPN7-215ENST00000492451 CAMTA2O94983 1202 aa17.9■□□□□ 0.46
PTPN7-215ENST00000492451 MYL6BP14649 208 aa17.9■□□□□ 0.46
PTPN7-215ENST00000492451 DPEP1P16444 411 aa17.9■□□□□ 0.46
PTPN7-215ENST00000492451 KRT24Q2M2I5 525 aa17.9■□□□□ 0.46
PTPN7-215ENST00000492451 DUSP27Q5VZP5 1158 aa17.9■□□□□ 0.46
PTPN7-215ENST00000492451 CLEC4GQ6UXB4 293 aa17.9■□□□□ 0.46
PTPN7-215ENST00000492451 BCORQ6W2J9 1755 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms