RNA–Protein interactions for RNA: ENST00000491282.5

SOX2-OT-212, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 882 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-212ENST00000491282 RFC4P35249 363 aa15.17■□□□□ 0.02
SOX2-OT-212ENST00000491282 CCDC87Q9NVE4 849 aa15.17■□□□□ 0.02
SOX2-OT-212ENST00000491282 KCPQ6ZWJ8 1503 aa15.17■□□□□ 0.02
SOX2-OT-212ENST00000491282 NFE2L2Q16236 605 aa15.16■□□□□ 0.02
SOX2-OT-212ENST00000491282 NLGN2Q8NFZ4 835 aa15.16■□□□□ 0.02
SOX2-OT-212ENST00000491282 HTATSF1O43719 755 aaKnown RBP15.15■□□□□ 0.02
SOX2-OT-212ENST00000491282 VSIG10Q8N0Z9 540 aa15.15■□□□□ 0.02
SOX2-OT-212ENST00000491282 PNNQ9H307 717 aaKnown RBP15.15■□□□□ 0.02
SOX2-OT-212ENST00000491282 MIS18AQ9NYP9 233 aa15.15■□□□□ 0.02
SOX2-OT-212ENST00000491282 SRP68Q9UHB9 627 aaKnown RBP15.15■□□□□ 0.02
SOX2-OT-212ENST00000491282 MAPK8IP3Q9UPT6 1336 aa15.15■□□□□ 0.02
SOX2-OT-212ENST00000491282 ZNF831Q5JPB2 1677 aa15.14■□□□□ 0.01
SOX2-OT-212ENST00000491282 MMP10P09238 476 aa15.14■□□□□ 0.01
SOX2-OT-212ENST00000491282 CANXP27824 592 aaKnown RBP15.14■□□□□ 0.01
SOX2-OT-212ENST00000491282 CCDC146Q8IYE0 955 aa15.14■□□□□ 0.01
SOX2-OT-212ENST00000491282 THUMPD2Q9BTF0 503 aaKnown RBP15.14■□□□□ 0.01
SOX2-OT-212ENST00000491282 ZBTB1Q9Y2K1 713 aa15.14■□□□□ 0.01
SOX2-OT-212ENST00000491282 HEG1Q9ULI3 1381 aa15.13■□□□□ 0.01
SOX2-OT-212ENST00000491282 MYH14Q7Z406 1995 aaKnown RBP15.13■□□□□ 0.01
SOX2-OT-212ENST00000491282 GYS1P13807 737 aa15.13■□□□□ 0.01
SOX2-OT-212ENST00000491282 COL5A3P25940 1745 aaPredicted RBP15.13■□□□□ 0.01
SOX2-OT-212ENST00000491282 TJP1Q07157 1748 aa15.13■□□□□ 0.01
SOX2-OT-212ENST00000491282 COL24A1Q17RW2 1714 aa15.13■□□□□ 0.01
SOX2-OT-212ENST00000491282 NLGN1Q8N2Q7 840 aa15.13■□□□□ 0.01
SOX2-OT-212ENST00000491282 FMNL2Q96PY5 1086 aa15.13■□□□□ 0.01
SOX2-OT-212ENST00000491282 SOS1Q07889 1333 aaPredicted RBP15.13■□□□□ 0.01
SOX2-OT-212ENST00000491282 STARD3NLO95772 234 aa15.12■□□□□ 0.01
SOX2-OT-212ENST00000491282 TAF7Q15545 349 aaPredicted RBP15.12■□□□□ 0.01
SOX2-OT-212ENST00000491282 PELP1Q8IZL8 1130 aaKnown RBP15.12■□□□□ 0.01
SOX2-OT-212ENST00000491282 VIRMAQ69YN4 1812 aaKnown RBP15.12■□□□□ 0.01
SOX2-OT-212ENST00000491282 PRAMEF22A3QJZ6 481 aa15.11■□□□□ 0.01
SOX2-OT-212ENST00000491282 WDR43Q15061 677 aaKnown RBP eCLIP15.11■□□□□ 0.01
SOX2-OT-212ENST00000491282 GPR162Q16538 588 aa15.11■□□□□ 0.01
SOX2-OT-212ENST00000491282 ADAMTS8Q9UP79 889 aa15.11■□□□□ 0.01
SOX2-OT-212ENST00000491282 RRP7AQ9Y3A4 280 aaKnown RBP15.11■□□□□ 0.01
SOX2-OT-212ENST00000491282 CD2APQ9Y5K6 639 aa15.11■□□□□ 0.01
SOX2-OT-212ENST00000491282 RIPK4P57078 832 aa15.1■□□□□ 0.01
SOX2-OT-212ENST00000491282 TEX13AQ9BXU3 409 aaPredicted RBP15.1■□□□□ 0.01
SOX2-OT-212ENST00000491282 USP16Q9Y5T5 823 aa15.1■□□□□ 0.01
SOX2-OT-212ENST00000491282 USP42Q9H9J4 1324 aaKnown RBP15.1■□□□□ 0.01
SOX2-OT-212ENST00000491282 ZPR1O75312 459 aa15.09■□□□□ 0.01
SOX2-OT-212ENST00000491282 A1BGP04217 495 aa15.09■□□□□ 0.01
SOX2-OT-212ENST00000491282 TMPOP42166 694 aaKnown RBP15.09■□□□□ 0.01
SOX2-OT-212ENST00000491282 NEUROD2Q15784 382 aa15.09■□□□□ 0.01
SOX2-OT-212ENST00000491282 USPL1Q5W0Q7 1092 aa15.09■□□□□ 0.01
SOX2-OT-212ENST00000491282 ZNF330Q9Y3S2 320 aaPredicted RBP15.09■□□□□ 0.01
SOX2-OT-212ENST00000491282 SIPA1L3O60292 1781 aaPredicted RBP15.08■□□□□ 0.01
SOX2-OT-212ENST00000491282 SNRPA1P09661 255 aaKnown RBP15.08■□□□□ 0
SOX2-OT-212ENST00000491282 CCDC184Q52MB2 194 aa15.08■□□□□ 0
SOX2-OT-212ENST00000491282 NARFQ9UHQ1 456 aa15.08■□□□□ 0
SOX2-OT-212ENST00000491282 WWC3Q9ULE0 1092 aa15.08■□□□□ 0
SOX2-OT-212ENST00000491282 COL15A1P39059 1388 aa15.08■□□□□ 0
SOX2-OT-212ENST00000491282 UBR2Q8IWV8 1755 aa15.08■□□□□ 0
SOX2-OT-212ENST00000491282 CICQ96RK0 1608 aaPredicted RBP15.07■□□□□ 0
SOX2-OT-212ENST00000491282 PIP4K2AP48426 406 aaPredicted RBP15.07■□□□□ 0
SOX2-OT-212ENST00000491282 EIF5P55010 431 aaKnown RBP15.07■□□□□ 0
SOX2-OT-212ENST00000491282 DDR1Q08345 913 aa15.07■□□□□ 0
SOX2-OT-212ENST00000491282 RUNDC1Q96C34 613 aa15.07■□□□□ 0
SOX2-OT-212ENST00000491282 PARP3Q9Y6F1 533 aa15.07■□□□□ 0
SOX2-OT-212ENST00000491282 YBX3P16989 372 aaKnown RBP eCLIP15.06■□□□□ 0
SOX2-OT-212ENST00000491282 VASPP50552 380 aaPredicted RBP15.06■□□□□ 0
SOX2-OT-212ENST00000491282 PNISRQ8TF01 805 aaKnown RBP15.06■□□□□ 0
SOX2-OT-212ENST00000491282 BCL2L12Q9HB09 334 aa15.06■□□□□ 0
SOX2-OT-212ENST00000491282 TBC1D2BQ9UPU7 963 aa15.06■□□□□ 0
SOX2-OT-212ENST00000491282 YY1P25490 414 aa15.05■□□□□ -0
SOX2-OT-212ENST00000491282 IL6STP40189 918 aaPredicted RBP15.05■□□□□ -0
SOX2-OT-212ENST00000491282 A0A087WZG4 1122 aa15.04■□□□□ -0
SOX2-OT-212ENST00000491282 TM4SF1P30408 202 aa15.04■□□□□ -0
SOX2-OT-212ENST00000491282 EIF4A1P60842 406 aaKnown RBP15.04■□□□□ -0
SOX2-OT-212ENST00000491282 NFIXQ14938 502 aa15.04■□□□□ -0
SOX2-OT-212ENST00000491282 C4AP0C0L4 1744 aa15.03■□□□□ -0
SOX2-OT-212ENST00000491282 LMOD3Q0VAK6 560 aa15.03■□□□□ -0
SOX2-OT-212ENST00000491282 BICDL1Q6ZP65 573 aa15.03■□□□□ -0
SOX2-OT-212ENST00000491282 TSPYL4Q9UJ04 414 aa15.03■□□□□ -0
SOX2-OT-212ENST00000491282 DLG5Q8TDM6 1919 aa15.02■□□□□ -0
SOX2-OT-212ENST00000491282 A0A0G2JLW4 131 aa15.02■□□□□ -0
SOX2-OT-212ENST00000491282 NBPF26B4DH59 902 aa15.02■□□□□ -0
SOX2-OT-212ENST00000491282 POLRMTO00411 1230 aaKnown RBP15.02■□□□□ -0
SOX2-OT-212ENST00000491282 ANP32CO43423 234 aa15.02■□□□□ -0
SOX2-OT-212ENST00000491282 GIGYF1O75420 1035 aaPredicted RBP15.02■□□□□ -0
SOX2-OT-212ENST00000491282 NBPF10Q6P3W6 841 aaKnown RBP15.02■□□□□ -0
SOX2-OT-212ENST00000491282 NPM2Q86SE8 214 aaKnown RBP15.02■□□□□ -0
SOX2-OT-212ENST00000491282 NBPF15Q8N660 670 aa15.02■□□□□ -0
SOX2-OT-212ENST00000491282 TRIM35Q9UPQ4 493 aa15.02■□□□□ -0
SOX2-OT-212ENST00000491282 APAF1O14727 1248 aa15.01□□□□□ -0.01
SOX2-OT-212ENST00000491282 DPEP1P16444 411 aa15.01□□□□□ -0.01
SOX2-OT-212ENST00000491282 TBC1D9BQ66K14 1250 aa15□□□□□ -0.01
SOX2-OT-212ENST00000491282 LAS1LQ9Y4W2 734 aaKnown RBP15□□□□□ -0.01
SOX2-OT-212ENST00000491282 C10orf71Q711Q0 1435 aa15□□□□□ -0.01
SOX2-OT-212ENST00000491282 SENP3-EIF4A1A0A087X0R7 540 aa14.99□□□□□ -0.01
SOX2-OT-212ENST00000491282 GRIN3BO60391 1043 aa14.99□□□□□ -0.01
SOX2-OT-212ENST00000491282 CAMTA2O94983 1202 aa14.99□□□□□ -0.01
SOX2-OT-212ENST00000491282 SERPINB2P05120 415 aa14.99□□□□□ -0.01
SOX2-OT-212ENST00000491282 TGFB2P61812 414 aa14.99□□□□□ -0.01
SOX2-OT-212ENST00000491282 DZIP3Q86Y13 1208 aaKnown RBP14.99□□□□□ -0.01
SOX2-OT-212ENST00000491282 NGEFQ8N5V2 710 aa14.99□□□□□ -0.01
SOX2-OT-212ENST00000491282 PXDNLA1KZ92 1463 aa14.98□□□□□ -0.01
SOX2-OT-212ENST00000491282 MRS2Q9HD23 443 aa14.98□□□□□ -0.01
SOX2-OT-212ENST00000491282 CHL1O00533 1208 aa14.97□□□□□ -0.01
SOX2-OT-212ENST00000491282 CHRNA5P30532 468 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms