RNA–Protein interactions for RNA: ENST00000491104.1

CACNA1C-227, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 5

Gene CACNA1C, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-227ENST00000491104 VSIG10Q8N0Z9 540 aa13.94□□□□□ -0.18
CACNA1C-227ENST00000491104 EIF2S2P20042 333 aaKnown RBP13.93□□□□□ -0.18
CACNA1C-227ENST00000491104 PIP4K2AP48426 406 aaPredicted RBP13.93□□□□□ -0.18
CACNA1C-227ENST00000491104 TCERG1O14776 1098 aaKnown RBP13.92□□□□□ -0.18
CACNA1C-227ENST00000491104 CYP19A1P11511 503 aaPredicted RBP13.92□□□□□ -0.18
CACNA1C-227ENST00000491104 ZNF827Q17R98 1081 aa13.92□□□□□ -0.18
CACNA1C-227ENST00000491104 TWISTNBQ3B726 338 aaPredicted RBP13.92□□□□□ -0.18
CACNA1C-227ENST00000491104 SMIM5Q71RC9 77 aa13.92□□□□□ -0.18
CACNA1C-227ENST00000491104 ANO8Q9HCE9 1232 aaPredicted RBP13.92□□□□□ -0.18
CACNA1C-227ENST00000491104 UBR3Q6ZT12 1888 aa13.92□□□□□ -0.18
CACNA1C-227ENST00000491104 A1BGP04217 495 aa13.91□□□□□ -0.18
CACNA1C-227ENST00000491104 CRKLP46109 303 aaKnown RBP13.91□□□□□ -0.18
CACNA1C-227ENST00000491104 ZBTB1Q9Y2K1 713 aa13.91□□□□□ -0.18
CACNA1C-227ENST00000491104 VAMP4O75379 141 aa13.9□□□□□ -0.18
CACNA1C-227ENST00000491104 ANXA1P04083 346 aa13.9□□□□□ -0.18
CACNA1C-227ENST00000491104 CANXP27824 592 aaKnown RBP13.9□□□□□ -0.18
CACNA1C-227ENST00000491104 HDGFL1Q5TGJ6 251 aa13.9□□□□□ -0.18
CACNA1C-227ENST00000491104 INTS5Q6P9B9 1019 aaKnown RBP13.9□□□□□ -0.18
CACNA1C-227ENST00000491104 AMIGO3Q86WK7 504 aa13.9□□□□□ -0.18
CACNA1C-227ENST00000491104 CNTNAP4Q9C0A0 1308 aa13.9□□□□□ -0.19
CACNA1C-227ENST00000491104 HOXB7P09629 217 aa13.89□□□□□ -0.19
CACNA1C-227ENST00000491104 PROSER3Q2NL68 480 aa13.89□□□□□ -0.19
CACNA1C-227ENST00000491104 AK7Q96M32 723 aa13.89□□□□□ -0.19
CACNA1C-227ENST00000491104 TEX13AQ9BXU3 409 aaPredicted RBP13.89□□□□□ -0.19
CACNA1C-227ENST00000491104 CCDC87Q9NVE4 849 aa13.89□□□□□ -0.19
CACNA1C-227ENST00000491104 C4AP0C0L4 1744 aa13.89□□□□□ -0.19
CACNA1C-227ENST00000491104 NBPF26B4DH59 902 aa13.88□□□□□ -0.19
CACNA1C-227ENST00000491104 GNPATO15228 680 aa13.88□□□□□ -0.19
CACNA1C-227ENST00000491104 STARD3NLO95772 234 aa13.88□□□□□ -0.19
CACNA1C-227ENST00000491104 NBPF14Q5TI25 921 aa13.88□□□□□ -0.19
CACNA1C-227ENST00000491104 NBPF10Q6P3W6 841 aaKnown RBP13.88□□□□□ -0.19
CACNA1C-227ENST00000491104 NBPF15Q8N660 670 aa13.88□□□□□ -0.19
CACNA1C-227ENST00000491104 AKT1S1Q96B36 256 aa13.88□□□□□ -0.19
CACNA1C-227ENST00000491104 ZNF330Q9Y3S2 320 aaPredicted RBP13.88□□□□□ -0.19
CACNA1C-227ENST00000491104 PHF14O94880 888 aa13.87□□□□□ -0.19
CACNA1C-227ENST00000491104 MYL6BP14649 208 aa13.87□□□□□ -0.19
CACNA1C-227ENST00000491104 PDIA6Q15084 440 aa13.87□□□□□ -0.19
CACNA1C-227ENST00000491104 STK32BQ9NY57 414 aa13.87□□□□□ -0.19
CACNA1C-227ENST00000491104 CHPF2Q9P2E5 772 aa13.87□□□□□ -0.19
CACNA1C-227ENST00000491104 QSER1Q2KHR3 1735 aa13.87□□□□□ -0.19
CACNA1C-227ENST00000491104 SLC15A2Q16348 729 aa13.86□□□□□ -0.19
CACNA1C-227ENST00000491104 RC3H1Q5TC82 1133 aaKnown RBP13.86□□□□□ -0.19
CACNA1C-227ENST00000491104 BCL2L13Q9BXK5 485 aa13.86□□□□□ -0.19
CACNA1C-227ENST00000491104 SOS1Q07889 1333 aaPredicted RBP13.86□□□□□ -0.19
CACNA1C-227ENST00000491104 RPS6KA4O75676 772 aa13.85□□□□□ -0.19
CACNA1C-227ENST00000491104 TFCP2L1Q9NZI6 479 aa13.85□□□□□ -0.19
CACNA1C-227ENST00000491104 COL15A1P39059 1388 aa13.84□□□□□ -0.19
CACNA1C-227ENST00000491104 CACNA1FO60840 1977 aa13.84□□□□□ -0.19
CACNA1C-227ENST00000491104 CCDC30Q5VVM6 783 aa13.84□□□□□ -0.19
CACNA1C-227ENST00000491104 DDX21Q9NR30 783 aaKnown RBP eCLIP13.84□□□□□ -0.19
CACNA1C-227ENST00000491104 RTCBQ9Y3I0 505 aaKnown RBP13.84□□□□□ -0.19
CACNA1C-227ENST00000491104 ERBB4Q15303 1308 aa13.84□□□□□ -0.19
CACNA1C-227ENST00000491104 PNPLA7Q6ZV29 1317 aa13.84□□□□□ -0.19
CACNA1C-227ENST00000491104 BCORQ6W2J9 1755 aa13.83□□□□□ -0.19
CACNA1C-227ENST00000491104 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.83□□□□□ -0.2
CACNA1C-227ENST00000491104 PSDA5PKW4 1024 aaPredicted RBP13.83□□□□□ -0.2
CACNA1C-227ENST00000491104 IL6STP40189 918 aaPredicted RBP13.83□□□□□ -0.2
CACNA1C-227ENST00000491104 EIF5P55010 431 aaKnown RBP13.83□□□□□ -0.2
CACNA1C-227ENST00000491104 LRP10Q7Z4F1 713 aa13.83□□□□□ -0.2
CACNA1C-227ENST00000491104 SSH1Q8WYL5 1049 aa13.83□□□□□ -0.2
CACNA1C-227ENST00000491104 STK31Q9BXU1 1019 aa13.83□□□□□ -0.2
CACNA1C-227ENST00000491104 PHAXQ9H814 394 aaKnown RBP13.83□□□□□ -0.2
CACNA1C-227ENST00000491104 DBF4Q9UBU7 674 aaPredicted RBP13.83□□□□□ -0.2
CACNA1C-227ENST00000491104 SCN7AQ01118 1682 aa13.82□□□□□ -0.2
CACNA1C-227ENST00000491104 CASZ1Q86V15 1759 aa13.82□□□□□ -0.2
CACNA1C-227ENST00000491104 CT47B1P0C2W7 299 aaPredicted RBP13.82□□□□□ -0.2
CACNA1C-227ENST00000491104 AIMP1Q12904 312 aaKnown RBP13.82□□□□□ -0.2
CACNA1C-227ENST00000491104 R3HDM1Q15032 1099 aaKnown RBP13.82□□□□□ -0.2
CACNA1C-227ENST00000491104 TTLL7Q6ZT98 887 aa13.82□□□□□ -0.2
CACNA1C-227ENST00000491104 G2E3Q7L622 706 aa13.82□□□□□ -0.2
CACNA1C-227ENST00000491104 MRPL50Q8N5N7 158 aaKnown RBP13.82□□□□□ -0.2
CACNA1C-227ENST00000491104 XAGE3Q8WTP9 111 aa13.82□□□□□ -0.2
CACNA1C-227ENST00000491104 ARXQ96QS3 562 aa13.82□□□□□ -0.2
CACNA1C-227ENST00000491104 PDGFDQ9GZP0 370 aaPredicted RBP13.82□□□□□ -0.2
CACNA1C-227ENST00000491104 SLC4A2P04920 1241 aa13.81□□□□□ -0.2
CACNA1C-227ENST00000491104 SSFA2P28290 1259 aa13.81□□□□□ -0.2
CACNA1C-227ENST00000491104 RARSP54136 660 aaKnown RBP13.81□□□□□ -0.2
CACNA1C-227ENST00000491104 COL23A1Q86Y22 540 aaPredicted RBP13.81□□□□□ -0.2
CACNA1C-227ENST00000491104 ARHGEF1Q92888 912 aaKnown RBP13.81□□□□□ -0.2
CACNA1C-227ENST00000491104 SMC4Q9NTJ3 1288 aa13.81□□□□□ -0.2
CACNA1C-227ENST00000491104 SRP68Q9UHB9 627 aaKnown RBP13.81□□□□□ -0.2
CACNA1C-227ENST00000491104 TBC1D2BQ9UPU7 963 aa13.81□□□□□ -0.2
CACNA1C-227ENST00000491104 ARFGEF2Q9Y6D5 1785 aa13.81□□□□□ -0.2
CACNA1C-227ENST00000491104 MSH5O43196 834 aa13.8□□□□□ -0.2
CACNA1C-227ENST00000491104 BCAR3O75815 825 aa13.8□□□□□ -0.2
CACNA1C-227ENST00000491104 HMGB2P26583 209 aaKnown RBP13.8□□□□□ -0.2
CACNA1C-227ENST00000491104 ALDH1L2Q3SY69 923 aa13.8□□□□□ -0.2
CACNA1C-227ENST00000491104 TRAPPC3LQ5T215 181 aa13.8□□□□□ -0.2
CACNA1C-227ENST00000491104 COPS6Q7L5N1 327 aa13.8□□□□□ -0.2
CACNA1C-227ENST00000491104 NUP98P52948 1817 aa13.8□□□□□ -0.2
CACNA1C-227ENST00000491104 DZIP3Q86Y13 1208 aaKnown RBP13.79□□□□□ -0.2
CACNA1C-227ENST00000491104 ZBTB3Q9H5J0 574 aa13.79□□□□□ -0.2
CACNA1C-227ENST00000491104 HYPKQ9NX55 129 aa13.79□□□□□ -0.2
CACNA1C-227ENST00000491104 RFC4P35249 363 aa13.78□□□□□ -0.2
CACNA1C-227ENST00000491104 FLIIQ13045 1269 aa13.78□□□□□ -0.2
CACNA1C-227ENST00000491104 NPM2Q86SE8 214 aaKnown RBP13.78□□□□□ -0.2
CACNA1C-227ENST00000491104 ZNF428Q96B54 188 aa13.78□□□□□ -0.2
CACNA1C-227ENST00000491104 RCAN3Q9UKA8 241 aa13.78□□□□□ -0.2
CACNA1C-227ENST00000491104 ANKRD36CQ5JPF3 1778 aa13.78□□□□□ -0.2
CACNA1C-227ENST00000491104 A0A087WZG4 1122 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms