RNA–Protein interactions for RNA: ENST00000490564.1

NINJ1-205, Transcript of ninjurin 1, humanhuman

TSL 1 (best)

Gene NINJ1, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINJ1-205ENST00000490564 SCN7AQ01118 1682 aa13.85□□□□□ -0.19
NINJ1-205ENST00000490564 TEX13AQ9BXU3 409 aaPredicted RBP13.85□□□□□ -0.19
NINJ1-205ENST00000490564 ZBTB1Q9Y2K1 713 aa13.85□□□□□ -0.19
NINJ1-205ENST00000490564 COL15A1P39059 1388 aa13.84□□□□□ -0.19
NINJ1-205ENST00000490564 KCNQ3O43525 872 aa13.84□□□□□ -0.19
NINJ1-205ENST00000490564 STARD3NLO95772 234 aa13.84□□□□□ -0.19
NINJ1-205ENST00000490564 MMP10P09238 476 aa13.84□□□□□ -0.19
NINJ1-205ENST00000490564 BCORQ6W2J9 1755 aa13.83□□□□□ -0.19
NINJ1-205ENST00000490564 GOLGB1Q14789 3259 aaKnown RBP13.83□□□□□ -0.2
NINJ1-205ENST00000490564 SRP68Q9UHB9 627 aaKnown RBP13.83□□□□□ -0.2
NINJ1-205ENST00000490564 NRXN2Q9P2S2 1712 aa13.83□□□□□ -0.2
NINJ1-205ENST00000490564 N4BP2Q86UW6 1770 aaPredicted RBP13.83□□□□□ -0.2
NINJ1-205ENST00000490564 AFDNP55196 1824 aaKnown RBP13.83□□□□□ -0.2
NINJ1-205ENST00000490564 ZNF316A6NFI3 1004 aaPredicted RBP13.82□□□□□ -0.2
NINJ1-205ENST00000490564 TAF7Q15545 349 aaPredicted RBP13.82□□□□□ -0.2
NINJ1-205ENST00000490564 BRCA1P38398 1863 aaKnown RBP13.82□□□□□ -0.2
NINJ1-205ENST00000490564 C10orf71Q711Q0 1435 aa13.81□□□□□ -0.2
NINJ1-205ENST00000490564 EIF5P55010 431 aaKnown RBP13.81□□□□□ -0.2
NINJ1-205ENST00000490564 FKBP8Q14318 412 aa13.81□□□□□ -0.2
NINJ1-205ENST00000490564 USPL1Q5W0Q7 1092 aa13.81□□□□□ -0.2
NINJ1-205ENST00000490564 NARFQ9UHQ1 456 aa13.81□□□□□ -0.2
NINJ1-205ENST00000490564 ZPR1O75312 459 aa13.8□□□□□ -0.2
NINJ1-205ENST00000490564 CANXP27824 592 aaKnown RBP13.8□□□□□ -0.2
NINJ1-205ENST00000490564 WDR43Q15061 677 aaKnown RBP eCLIP13.8□□□□□ -0.2
NINJ1-205ENST00000490564 GPR162Q16538 588 aa13.8□□□□□ -0.2
NINJ1-205ENST00000490564 CCDC184Q52MB2 194 aa13.8□□□□□ -0.2
NINJ1-205ENST00000490564 PNISRQ8TF01 805 aaKnown RBP13.8□□□□□ -0.2
NINJ1-205ENST00000490564 PARP3Q9Y6F1 533 aa13.8□□□□□ -0.2
NINJ1-205ENST00000490564 A0A087WZG4 1122 aa13.79□□□□□ -0.2
NINJ1-205ENST00000490564 SNRPA1P09661 255 aaKnown RBP13.79□□□□□ -0.2
NINJ1-205ENST00000490564 YY1P25490 414 aa13.79□□□□□ -0.2
NINJ1-205ENST00000490564 TM4SF1P30408 202 aa13.79□□□□□ -0.2
NINJ1-205ENST00000490564 IL6STP40189 918 aaPredicted RBP13.79□□□□□ -0.2
NINJ1-205ENST00000490564 TMPOP42166 694 aaKnown RBP13.79□□□□□ -0.2
NINJ1-205ENST00000490564 RIPK4P57078 832 aa13.79□□□□□ -0.2
NINJ1-205ENST00000490564 PXDNLA1KZ92 1463 aa13.79□□□□□ -0.2
NINJ1-205ENST00000490564 PRAMEF22A3QJZ6 481 aa13.78□□□□□ -0.2
NINJ1-205ENST00000490564 A1BGP04217 495 aa13.78□□□□□ -0.2
NINJ1-205ENST00000490564 DDR1Q08345 913 aa13.78□□□□□ -0.2
NINJ1-205ENST00000490564 CCDC146Q8IYE0 955 aa13.78□□□□□ -0.2
NINJ1-205ENST00000490564 PELP1Q8IZL8 1130 aaKnown RBP13.78□□□□□ -0.2
NINJ1-205ENST00000490564 RUNDC1Q96C34 613 aa13.78□□□□□ -0.2
NINJ1-205ENST00000490564 THUMPD2Q9BTF0 503 aaKnown RBP13.78□□□□□ -0.2
NINJ1-205ENST00000490564 BCL2L12Q9HB09 334 aa13.78□□□□□ -0.2
NINJ1-205ENST00000490564 MIS18AQ9NYP9 233 aa13.78□□□□□ -0.2
NINJ1-205ENST00000490564 ADAMTS8Q9UP79 889 aa13.78□□□□□ -0.2
NINJ1-205ENST00000490564 USP16Q9Y5T5 823 aa13.78□□□□□ -0.2
NINJ1-205ENST00000490564 POLRMTO00411 1230 aaKnown RBP13.77□□□□□ -0.21
NINJ1-205ENST00000490564 YBX3P16989 372 aaKnown RBP eCLIP13.77□□□□□ -0.21
NINJ1-205ENST00000490564 TGFB2P61812 414 aa13.77□□□□□ -0.21
NINJ1-205ENST00000490564 LMOD3Q0VAK6 560 aa13.77□□□□□ -0.21
NINJ1-205ENST00000490564 DLEC1Q9Y238 1755 aa13.77□□□□□ -0.21
NINJ1-205ENST00000490564 ARFGEF1Q9Y6D6 1849 aa13.76□□□□□ -0.21
NINJ1-205ENST00000490564 GRIN3BO60391 1043 aa13.75□□□□□ -0.21
NINJ1-205ENST00000490564 EIF4A1P60842 406 aaKnown RBP13.75□□□□□ -0.21
NINJ1-205ENST00000490564 NFIXQ14938 502 aa13.75□□□□□ -0.21
NINJ1-205ENST00000490564 BABAM1Q9NWV8 329 aa13.75□□□□□ -0.21
NINJ1-205ENST00000490564 GIGYF1O75420 1035 aaPredicted RBP13.74□□□□□ -0.21
NINJ1-205ENST00000490564 RRP7AQ9Y3A4 280 aaKnown RBP13.74□□□□□ -0.21
NINJ1-205ENST00000490564 ZNF330Q9Y3S2 320 aaPredicted RBP13.74□□□□□ -0.21
NINJ1-205ENST00000490564 ANKRD31Q8N7Z5 1873 aa13.74□□□□□ -0.21
NINJ1-205ENST00000490564 NBPF26B4DH59 902 aa13.73□□□□□ -0.21
NINJ1-205ENST00000490564 NBPF10Q6P3W6 841 aaKnown RBP13.73□□□□□ -0.21
NINJ1-205ENST00000490564 NPM2Q86SE8 214 aaKnown RBP13.73□□□□□ -0.21
NINJ1-205ENST00000490564 NBPF15Q8N660 670 aa13.73□□□□□ -0.21
NINJ1-205ENST00000490564 TSPYL4Q9UJ04 414 aa13.73□□□□□ -0.21
NINJ1-205ENST00000490564 TRIM35Q9UPQ4 493 aa13.73□□□□□ -0.21
NINJ1-205ENST00000490564 TBC1D2BQ9UPU7 963 aa13.73□□□□□ -0.21
NINJ1-205ENST00000490564 NUP98P52948 1817 aa13.72□□□□□ -0.21
NINJ1-205ENST00000490564 CAMTA2O94983 1202 aa13.72□□□□□ -0.21
NINJ1-205ENST00000490564 PIP4K2AP48426 406 aaPredicted RBP13.72□□□□□ -0.21
NINJ1-205ENST00000490564 NEUROD2Q15784 382 aa13.72□□□□□ -0.21
NINJ1-205ENST00000490564 DZIP3Q86Y13 1208 aaKnown RBP13.72□□□□□ -0.21
NINJ1-205ENST00000490564 A0A0G2JLW4 131 aa13.71□□□□□ -0.21
NINJ1-205ENST00000490564 SERPINB2P05120 415 aa13.71□□□□□ -0.21
NINJ1-205ENST00000490564 DPEP1P16444 411 aa13.71□□□□□ -0.21
NINJ1-205ENST00000490564 TBC1D9BQ66K14 1250 aa13.71□□□□□ -0.21
NINJ1-205ENST00000490564 RGL2O15211 777 aa13.7□□□□□ -0.22
NINJ1-205ENST00000490564 ANP32CO43423 234 aa13.7□□□□□ -0.22
NINJ1-205ENST00000490564 KCNA3P22001 575 aa13.7□□□□□ -0.22
NINJ1-205ENST00000490564 WWC3Q9ULE0 1092 aa13.7□□□□□ -0.22
NINJ1-205ENST00000490564 COL11A2P13942 1736 aaPredicted RBP13.7□□□□□ -0.22
NINJ1-205ENST00000490564 CARMIL3Q8ND23 1372 aa13.7□□□□□ -0.22
NINJ1-205ENST00000490564 CLEC4GQ6UXB4 293 aa13.69□□□□□ -0.22
NINJ1-205ENST00000490564 BICDL1Q6ZP65 573 aa13.69□□□□□ -0.22
NINJ1-205ENST00000490564 ERBB4Q15303 1308 aa13.68□□□□□ -0.22
NINJ1-205ENST00000490564 CHL1O00533 1208 aa13.68□□□□□ -0.22
NINJ1-205ENST00000490564 APAF1O14727 1248 aa13.68□□□□□ -0.22
NINJ1-205ENST00000490564 ARFGEF2Q9Y6D5 1785 aa13.68□□□□□ -0.22
NINJ1-205ENST00000490564 SETDB2Q96T68 719 aa13.67□□□□□ -0.22
NINJ1-205ENST00000490564 PIM2Q9P1W9 311 aa13.67□□□□□ -0.22
NINJ1-205ENST00000490564 BCS1LQ9Y276 419 aa13.67□□□□□ -0.22
NINJ1-205ENST00000490564 ZNF652Q9Y2D9 606 aa13.67□□□□□ -0.22
NINJ1-205ENST00000490564 ANKRD36CQ5JPF3 1778 aa13.67□□□□□ -0.22
NINJ1-205ENST00000490564 CACNA1SQ13698 1873 aa13.67□□□□□ -0.22
NINJ1-205ENST00000490564 SENP3-EIF4A1A0A087X0R7 540 aa13.66□□□□□ -0.22
NINJ1-205ENST00000490564 CHRNA5P30532 468 aa13.66□□□□□ -0.22
NINJ1-205ENST00000490564 PRR5LQ6MZQ0 368 aa13.66□□□□□ -0.22
NINJ1-205ENST00000490564 ZNF784Q8NCA9 323 aaPredicted RBP13.66□□□□□ -0.22
NINJ1-205ENST00000490564 CFAP44Q96MT7 982 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms