RNA–Protein interactions for RNA: ENST00000490308.1

EPB41-212, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 3

Gene EPB41, Length 354 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-212ENST00000490308 SALL2Q9Y467 1007 aaPredicted RBP3.68□□□□□ -1.82
EPB41-212ENST00000490308 K7ELQ4 463 aaPredicted RBP3.67□□□□□ -1.82
EPB41-212ENST00000490308 PER1O15534 1290 aaPredicted RBP3.67□□□□□ -1.82
EPB41-212ENST00000490308 HRO43593 1189 aa3.67□□□□□ -1.82
EPB41-212ENST00000490308 PLIN1O60240 522 aa3.67□□□□□ -1.82
EPB41-212ENST00000490308 MYCP01106 439 aaPredicted RBP3.67□□□□□ -1.82
EPB41-212ENST00000490308 SSBP05455 408 aaKnown RBP eCLIP3.67□□□□□ -1.82
EPB41-212ENST00000490308 HSP90AA1P07900 732 aaKnown RBP3.67□□□□□ -1.82
EPB41-212ENST00000490308 CFHP08603 1231 aa3.67□□□□□ -1.82
EPB41-212ENST00000490308 DSC3Q14574 896 aa3.67□□□□□ -1.82
EPB41-212ENST00000490308 BMS1Q14692 1282 aaKnown RBP3.67□□□□□ -1.82
EPB41-212ENST00000490308 TCEAL1Q15170 157 aa3.67□□□□□ -1.82
EPB41-212ENST00000490308 CCSAPQ6IQ19 270 aaPredicted RBP3.67□□□□□ -1.82
EPB41-212ENST00000490308 SEPT12Q8IYM1 358 aa3.67□□□□□ -1.82
EPB41-212ENST00000490308 SEC16BQ96JE7 1060 aa3.67□□□□□ -1.82
EPB41-212ENST00000490308 ZFRQ96KR1 1074 aaKnown RBP3.67□□□□□ -1.82
EPB41-212ENST00000490308 TRIM55Q9BYV6 548 aa3.67□□□□□ -1.82
EPB41-212ENST00000490308 IRF2BPLQ9H1B7 796 aa3.67□□□□□ -1.82
EPB41-212ENST00000490308 PCDH12Q9NPG4 1184 aa3.67□□□□□ -1.82
EPB41-212ENST00000490308 CHPF2Q9P2E5 772 aa3.67□□□□□ -1.82
EPB41-212ENST00000490308 KLHL42Q9P2K6 505 aa3.67□□□□□ -1.82
EPB41-212ENST00000490308 HCSTQ9UBK5 93 aa3.67□□□□□ -1.82
EPB41-212ENST00000490308 TCEAL9Q9UHQ7 104 aa3.67□□□□□ -1.82
EPB41-212ENST00000490308 DDX41Q9UJV9 622 aaKnown RBP3.67□□□□□ -1.82
EPB41-212ENST00000490308 AK5Q9Y6K8 562 aa3.67□□□□□ -1.82
EPB41-212ENST00000490308 ZBTB7BO15156 539 aaPredicted RBP3.66□□□□□ -1.82
EPB41-212ENST00000490308 ZBTB24O43167 697 aaPredicted RBP3.66□□□□□ -1.82
EPB41-212ENST00000490308 EIF4BP23588 611 aaKnown RBP3.66□□□□□ -1.82
EPB41-212ENST00000490308 CTHP32929 405 aa3.66□□□□□ -1.82
EPB41-212ENST00000490308 CHMP4BP1P59074 171 aa3.66□□□□□ -1.82
EPB41-212ENST00000490308 KCNH2Q12809 1159 aa3.66□□□□□ -1.82
EPB41-212ENST00000490308 HDAC1Q13547 482 aaPredicted RBP3.66□□□□□ -1.82
EPB41-212ENST00000490308 PWP1Q13610 501 aa3.66□□□□□ -1.82
EPB41-212ENST00000490308 CNGB1Q14028 1251 aaPredicted RBP3.66□□□□□ -1.82
EPB41-212ENST00000490308 HLTFQ14527 1009 aaKnown RBP eCLIP3.66□□□□□ -1.82
EPB41-212ENST00000490308 RALBP1Q15311 655 aa3.66□□□□□ -1.82
EPB41-212ENST00000490308 ECM1Q16610 540 aa3.66□□□□□ -1.82
EPB41-212ENST00000490308 NBPF20Q3BBV1 942 aa3.66□□□□□ -1.82
EPB41-212ENST00000490308 PLEKHG4Q58EX7 1191 aa3.66□□□□□ -1.82
EPB41-212ENST00000490308 OXLD1Q5BKU9 147 aa3.66□□□□□ -1.82
EPB41-212ENST00000490308 C16orf46Q6P387 395 aa3.66□□□□□ -1.82
EPB41-212ENST00000490308 GPATCH3Q96I76 525 aa3.66□□□□□ -1.82
EPB41-212ENST00000490308 LRCH3Q96II8 777 aa3.66□□□□□ -1.82
EPB41-212ENST00000490308 USB1Q9BQ65 265 aaKnown RBP3.66□□□□□ -1.82
EPB41-212ENST00000490308 ARHGAP9Q9BRR9 750 aa3.66□□□□□ -1.82
EPB41-212ENST00000490308 MKNK1Q9BUB5 465 aa3.66□□□□□ -1.82
EPB41-212ENST00000490308 IFT57Q9NWB7 429 aa3.66□□□□□ -1.82
EPB41-212ENST00000490308 GOLGA8CPA6NN73 597 aa3.65□□□□□ -1.83
EPB41-212ENST00000490308 BHMG1C9JSJ3 638 aaPredicted RBP3.65□□□□□ -1.83
EPB41-212ENST00000490308 TK2O00142 265 aa3.65□□□□□ -1.83
EPB41-212ENST00000490308 KIF3BO15066 747 aa3.65□□□□□ -1.83
EPB41-212ENST00000490308 PRC1O43663 620 aa3.65□□□□□ -1.83
EPB41-212ENST00000490308 PARNO95453 639 aaKnown RBP3.65□□□□□ -1.83
EPB41-212ENST00000490308 F12P00748 615 aaPredicted RBP3.65□□□□□ -1.83
EPB41-212ENST00000490308 ATF4P18848 351 aaPredicted RBP3.65□□□□□ -1.83
EPB41-212ENST00000490308 GJA8P48165 433 aa3.65□□□□□ -1.83
EPB41-212ENST00000490308 BCAMP50895 628 aa3.65□□□□□ -1.83
EPB41-212ENST00000490308 PTPN12Q05209 780 aaKnown RBP3.65□□□□□ -1.83
EPB41-212ENST00000490308 NFX1Q12986 1120 aaKnown RBP3.65□□□□□ -1.83
EPB41-212ENST00000490308 BIRC2Q13490 618 aa3.65□□□□□ -1.83
EPB41-212ENST00000490308 COL9A2Q14055 689 aaPredicted RBP3.65□□□□□ -1.83
EPB41-212ENST00000490308 ENOX2Q16206 610 aaKnown RBP3.65□□□□□ -1.83
EPB41-212ENST00000490308 LDLRAD1Q5T700 205 aa3.65□□□□□ -1.83
EPB41-212ENST00000490308 DIEXFQ68CQ4 756 aaKnown RBP3.65□□□□□ -1.83
EPB41-212ENST00000490308 LAPTM4BQ86VI4 370 aa3.65□□□□□ -1.83
EPB41-212ENST00000490308 NLGN1Q8N2Q7 840 aa3.65□□□□□ -1.83
EPB41-212ENST00000490308 APPBP2Q92624 585 aa3.65□□□□□ -1.83
EPB41-212ENST00000490308 GPRASP2Q96D09 838 aa3.65□□□□□ -1.83
EPB41-212ENST00000490308 STAC3Q96MF2 364 aa3.65□□□□□ -1.83
EPB41-212ENST00000490308 FAM129BQ96TA1 746 aa3.65□□□□□ -1.83
EPB41-212ENST00000490308 SRCIN1Q9C0H9 1055 aa3.65□□□□□ -1.83
EPB41-212ENST00000490308 DNAJC25Q9H1X3 360 aa3.65□□□□□ -1.83
EPB41-212ENST00000490308 PIF1Q9H611 641 aa3.65□□□□□ -1.83
EPB41-212ENST00000490308 PRDM16Q9HAZ2 1276 aa3.65□□□□□ -1.83
EPB41-212ENST00000490308 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.65□□□□□ -1.83
EPB41-212ENST00000490308 FAM13BQ9NYF5 915 aa3.65□□□□□ -1.83
EPB41-212ENST00000490308 STIM2Q9P246 746 aa3.65□□□□□ -1.83
EPB41-212ENST00000490308 SEPT3Q9UH03 358 aa3.65□□□□□ -1.83
EPB41-212ENST00000490308 GGT7Q9UJ14 662 aa3.65□□□□□ -1.83
EPB41-212ENST00000490308 SFI1A8K8P3 1242 aa3.64□□□□□ -1.83
EPB41-212ENST00000490308 PEX14O75381 377 aa3.64□□□□□ -1.83
EPB41-212ENST00000490308 CDC45O75419 566 aa3.64□□□□□ -1.83
EPB41-212ENST00000490308 DKK1O94907 266 aa3.64□□□□□ -1.83
EPB41-212ENST00000490308 FGRP09769 529 aa3.64□□□□□ -1.83
EPB41-212ENST00000490308 JUNDP17535 347 aa3.64□□□□□ -1.83
EPB41-212ENST00000490308 PTMSP20962 102 aa3.64□□□□□ -1.83
EPB41-212ENST00000490308 FKBP5Q13451 457 aaPredicted RBP3.64□□□□□ -1.83
EPB41-212ENST00000490308 PUS10Q3MIT2 529 aaKnown RBP3.64□□□□□ -1.83
EPB41-212ENST00000490308 LONRF3Q496Y0 759 aa3.64□□□□□ -1.83
EPB41-212ENST00000490308 HOMER1Q86YM7 354 aa3.64□□□□□ -1.83
EPB41-212ENST00000490308 MCF2L2Q86YR7 1114 aa3.64□□□□□ -1.83
EPB41-212ENST00000490308 CCDC146Q8IYE0 955 aa3.64□□□□□ -1.83
EPB41-212ENST00000490308 SYNPOQ8N3V7 929 aa3.64□□□□□ -1.83
EPB41-212ENST00000490308 ANKK1Q8NFD2 765 aa3.64□□□□□ -1.83
EPB41-212ENST00000490308 ADAM32Q8TC27 787 aa3.64□□□□□ -1.83
EPB41-212ENST00000490308 PNISRQ8TF01 805 aaKnown RBP3.64□□□□□ -1.83
EPB41-212ENST00000490308 SRPK1Q96SB4 655 aaKnown RBP3.64□□□□□ -1.83
EPB41-212ENST00000490308 DDX56Q9NY93 547 aaKnown RBP3.64□□□□□ -1.83
EPB41-212ENST00000490308 MRPL42Q9Y6G3 142 aaKnown RBP3.64□□□□□ -1.83
EPB41-212ENST00000490308 PNMA6FA0A0J9YX94 578 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms