RNA–Protein interactions for RNA: ENST00000490056.5

SFXN5-220, Transcript of sideroflexin 5, humanhuman

TSL 1 (best)

Gene SFXN5, Length 906 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-220ENST00000490056 AK7Q96M32 723 aa21.72■■□□□ 1.07
SFXN5-220ENST00000490056 MYH16Q9H6N6 1097 aa21.72■■□□□ 1.07
SFXN5-220ENST00000490056 STARD3NLO95772 234 aa21.71■■□□□ 1.07
SFXN5-220ENST00000490056 SLFN5Q08AF3 891 aa21.71■■□□□ 1.07
SFXN5-220ENST00000490056 RC3H1Q5TC82 1133 aaKnown RBP21.71■■□□□ 1.07
SFXN5-220ENST00000490056 DUSP27Q5VZP5 1158 aa21.71■■□□□ 1.07
SFXN5-220ENST00000490056 AMIGO3Q86WK7 504 aa21.71■■□□□ 1.07
SFXN5-220ENST00000490056 CCDC87Q9NVE4 849 aa21.71■■□□□ 1.07
SFXN5-220ENST00000490056 TFCP2L1Q9NZI6 479 aa21.71■■□□□ 1.07
SFXN5-220ENST00000490056 CNTNAP4Q9C0A0 1308 aa21.71■■□□□ 1.07
SFXN5-220ENST00000490056 PSDA5PKW4 1024 aaPredicted RBP21.7■■□□□ 1.06
SFXN5-220ENST00000490056 E9PSI1 815 aa21.7■■□□□ 1.06
SFXN5-220ENST00000490056 GNPATO15228 680 aa21.7■■□□□ 1.06
SFXN5-220ENST00000490056 A1BGP04217 495 aa21.7■■□□□ 1.06
SFXN5-220ENST00000490056 R3HDM1Q15032 1099 aaKnown RBP21.7■■□□□ 1.06
SFXN5-220ENST00000490056 TSPYL6Q8N831 410 aa21.7■■□□□ 1.06
SFXN5-220ENST00000490056 EIF2S2P20042 333 aaKnown RBP21.69■■□□□ 1.06
SFXN5-220ENST00000490056 HMGB2P26583 209 aaKnown RBP21.69■■□□□ 1.06
SFXN5-220ENST00000490056 PIP4K2AP48426 406 aaPredicted RBP21.69■■□□□ 1.06
SFXN5-220ENST00000490056 NECTIN2Q92692 538 aa21.69■■□□□ 1.06
SFXN5-220ENST00000490056 YTHDC1Q96MU7 727 aaKnown RBP21.69■■□□□ 1.06
SFXN5-220ENST00000490056 ZBTB1Q9Y2K1 713 aa21.69■■□□□ 1.06
SFXN5-220ENST00000490056 CANXP27824 592 aaKnown RBP21.68■■□□□ 1.06
SFXN5-220ENST00000490056 EXOSC9Q06265 439 aaKnown RBP21.68■■□□□ 1.06
SFXN5-220ENST00000490056 ZBED9Q6R2W3 1325 aa21.68■■□□□ 1.06
SFXN5-220ENST00000490056 TUBGCP6Q96RT7 1819 aa21.68■■□□□ 1.06
SFXN5-220ENST00000490056 RPS6KA4O75676 772 aa21.67■■□□□ 1.06
SFXN5-220ENST00000490056 PHF14O94880 888 aa21.67■■□□□ 1.06
SFXN5-220ENST00000490056 LAMB4A4D0S4 1761 aa21.66■■□□□ 1.06
SFXN5-220ENST00000490056 TRMT2AQ8IZ69 625 aaKnown RBP21.66■■□□□ 1.06
SFXN5-220ENST00000490056 RTCBQ9Y3I0 505 aaKnown RBP21.66■■□□□ 1.06
SFXN5-220ENST00000490056 UBR3Q6ZT12 1888 aa21.66■■□□□ 1.06
SFXN5-220ENST00000490056 PNPLA7Q6ZV29 1317 aa21.65■■□□□ 1.06
SFXN5-220ENST00000490056 NBPF26B4DH59 902 aa21.65■■□□□ 1.06
SFXN5-220ENST00000490056 NBPF10Q6P3W6 841 aaKnown RBP21.65■■□□□ 1.06
SFXN5-220ENST00000490056 NBPF15Q8N660 670 aa21.65■■□□□ 1.06
SFXN5-220ENST00000490056 PDGFDQ9GZP0 370 aaPredicted RBP21.65■■□□□ 1.06
SFXN5-220ENST00000490056 HOXB7P09629 217 aa21.64■■□□□ 1.05
SFXN5-220ENST00000490056 TWISTNBQ3B726 338 aaPredicted RBP21.64■■□□□ 1.05
SFXN5-220ENST00000490056 COL23A1Q86Y22 540 aaPredicted RBP21.64■■□□□ 1.05
SFXN5-220ENST00000490056 SOS1Q07889 1333 aaPredicted RBP21.63■■□□□ 1.05
SFXN5-220ENST00000490056 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.63■■□□□ 1.05
SFXN5-220ENST00000490056 HDGFL1Q5TGJ6 251 aa21.63■■□□□ 1.05
SFXN5-220ENST00000490056 ZNF330Q9Y3S2 320 aaPredicted RBP21.63■■□□□ 1.05
SFXN5-220ENST00000490056 MSH5O43196 834 aa21.62■■□□□ 1.05
SFXN5-220ENST00000490056 ANXA1P04083 346 aa21.62■■□□□ 1.05
SFXN5-220ENST00000490056 SSFA2P28290 1259 aa21.62■■□□□ 1.05
SFXN5-220ENST00000490056 VAMP4O75379 141 aa21.61■■□□□ 1.05
SFXN5-220ENST00000490056 MYL6BP14649 208 aa21.61■■□□□ 1.05
SFXN5-220ENST00000490056 EIF5P55010 431 aaKnown RBP21.61■■□□□ 1.05
SFXN5-220ENST00000490056 PDIA6Q15084 440 aa21.61■■□□□ 1.05
SFXN5-220ENST00000490056 PROSER3Q2NL68 480 aa21.61■■□□□ 1.05
SFXN5-220ENST00000490056 TRAPPC3LQ5T215 181 aa21.61■■□□□ 1.05
SFXN5-220ENST00000490056 ARHGEF1Q92888 912 aaKnown RBP21.61■■□□□ 1.05
SFXN5-220ENST00000490056 TCERG1O14776 1098 aaKnown RBP21.6■■□□□ 1.05
SFXN5-220ENST00000490056 QSER1Q2KHR3 1735 aa21.6■■□□□ 1.05
SFXN5-220ENST00000490056 IL6STP40189 918 aaPredicted RBP21.59■■□□□ 1.05
SFXN5-220ENST00000490056 FLAD1Q8NFF5 587 aa21.59■■□□□ 1.05
SFXN5-220ENST00000490056 CHPF2Q9P2E5 772 aa21.59■■□□□ 1.05
SFXN5-220ENST00000490056 COL15A1P39059 1388 aa21.59■■□□□ 1.05
SFXN5-220ENST00000490056 ERBB4Q15303 1308 aa21.57■■□□□ 1.04
SFXN5-220ENST00000490056 ADRA2BP18089 450 aa21.57■■□□□ 1.04
SFXN5-220ENST00000490056 CCDC30Q5VVM6 783 aa21.57■■□□□ 1.04
SFXN5-220ENST00000490056 ARXQ96QS3 562 aa21.57■■□□□ 1.04
SFXN5-220ENST00000490056 SRP68Q9UHB9 627 aaKnown RBP21.57■■□□□ 1.04
SFXN5-220ENST00000490056 RFC4P35249 363 aa21.56■■□□□ 1.04
SFXN5-220ENST00000490056 LRP10Q7Z4F1 713 aa21.56■■□□□ 1.04
SFXN5-220ENST00000490056 DDX21Q9NR30 783 aaKnown RBP eCLIP21.56■■□□□ 1.04
SFXN5-220ENST00000490056 TBC1D2BQ9UPU7 963 aa21.56■■□□□ 1.04
SFXN5-220ENST00000490056 CASZ1Q86V15 1759 aa21.56■■□□□ 1.04
SFXN5-220ENST00000490056 DBF4Q9UBU7 674 aaPredicted RBP21.55■■□□□ 1.04
SFXN5-220ENST00000490056 C4AP0C0L4 1744 aa21.55■■□□□ 1.04
SFXN5-220ENST00000490056 A0A087WZG4 1122 aa21.54■■□□□ 1.04
SFXN5-220ENST00000490056 ZBTB7AO95365 584 aa21.54■■□□□ 1.04
SFXN5-220ENST00000490056 TTLL7Q6ZT98 887 aa21.54■■□□□ 1.04
SFXN5-220ENST00000490056 NPM2Q86SE8 214 aaKnown RBP21.54■■□□□ 1.04
SFXN5-220ENST00000490056 DZIP3Q86Y13 1208 aaKnown RBP21.54■■□□□ 1.04
SFXN5-220ENST00000490056 AIMP1Q12904 312 aaKnown RBP21.53■■□□□ 1.04
SFXN5-220ENST00000490056 MSL1Q68DK7 614 aa21.53■■□□□ 1.04
SFXN5-220ENST00000490056 ZPR1O75312 459 aa21.52■■□□□ 1.04
SFXN5-220ENST00000490056 USPL1Q5W0Q7 1092 aa21.52■■□□□ 1.04
SFXN5-220ENST00000490056 COPS6Q7L5N1 327 aa21.52■■□□□ 1.04
SFXN5-220ENST00000490056 XAGE3Q8WTP9 111 aa21.52■■□□□ 1.04
SFXN5-220ENST00000490056 STK31Q9BXU1 1019 aa21.52■■□□□ 1.04
SFXN5-220ENST00000490056 CHMP4AQ9BY43 222 aa21.52■■□□□ 1.04
SFXN5-220ENST00000490056 PHAXQ9H814 394 aaKnown RBP21.52■■□□□ 1.04
SFXN5-220ENST00000490056 NARFQ9UHQ1 456 aa21.52■■□□□ 1.04
SFXN5-220ENST00000490056 USP42Q9H9J4 1324 aaKnown RBP21.52■■□□□ 1.03
SFXN5-220ENST00000490056 GYS1P13807 737 aa21.51■■□□□ 1.03
SFXN5-220ENST00000490056 HYPKQ9NX55 129 aa21.51■■□□□ 1.03
SFXN5-220ENST00000490056 ATF5Q9Y2D1 282 aaPredicted RBP21.51■■□□□ 1.03
SFXN5-220ENST00000490056 CAMTA2O94983 1202 aa21.5■■□□□ 1.03
SFXN5-220ENST00000490056 SLC4A2P04920 1241 aa21.5■■□□□ 1.03
SFXN5-220ENST00000490056 SLC16A10Q8TF71 515 aa21.5■■□□□ 1.03
SFXN5-220ENST00000490056 BCL2L12Q9HB09 334 aa21.5■■□□□ 1.03
SFXN5-220ENST00000490056 G2E3Q7L622 706 aa21.49■■□□□ 1.03
SFXN5-220ENST00000490056 FKBP8Q14318 412 aa21.48■■□□□ 1.03
SFXN5-220ENST00000490056 MTFR1LQ9H019 292 aa21.48■■□□□ 1.03
SFXN5-220ENST00000490056 ZBTB3Q9H5J0 574 aa21.48■■□□□ 1.03
SFXN5-220ENST00000490056 CT47B1P0C2W7 299 aaPredicted RBP21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms