RNA–Protein interactions for RNA: ENST00000490017.1

MMP23B-208, Transcript of matrix metallopeptidase 23B, humanhuman

TSL 3

Gene MMP23B, Length 530 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP23B-208ENST00000490017 TAF7Q15545 349 aaPredicted RBP18.95■□□□□ 0.62
MMP23B-208ENST00000490017 NFE2L2Q16236 605 aa18.95■□□□□ 0.62
MMP23B-208ENST00000490017 PARP3Q9Y6F1 533 aa18.95■□□□□ 0.62
MMP23B-208ENST00000490017 USP42Q9H9J4 1324 aaKnown RBP18.95■□□□□ 0.62
MMP23B-208ENST00000490017 C4AP0C0L4 1744 aa18.94■□□□□ 0.62
MMP23B-208ENST00000490017 GOLGB1Q14789 3259 aaKnown RBP18.94■□□□□ 0.62
MMP23B-208ENST00000490017 PRKRIP1Q9H875 184 aaPredicted RBP18.94■□□□□ 0.62
MMP23B-208ENST00000490017 UTRNP46939 3433 aa18.93■□□□□ 0.62
MMP23B-208ENST00000490017 FKBP8Q14318 412 aa18.93■□□□□ 0.62
MMP23B-208ENST00000490017 USPL1Q5W0Q7 1092 aa18.93■□□□□ 0.62
MMP23B-208ENST00000490017 DLG5Q8TDM6 1919 aa18.93■□□□□ 0.62
MMP23B-208ENST00000490017 NARFQ9UHQ1 456 aa18.92■□□□□ 0.62
MMP23B-208ENST00000490017 COL15A1P39059 1388 aa18.92■□□□□ 0.62
MMP23B-208ENST00000490017 GRIN3BO60391 1043 aa18.91■□□□□ 0.62
MMP23B-208ENST00000490017 WDR43Q15061 677 aaKnown RBP eCLIP18.91■□□□□ 0.62
MMP23B-208ENST00000490017 NPM2Q86SE8 214 aaKnown RBP18.91■□□□□ 0.62
MMP23B-208ENST00000490017 MIS18AQ9NYP9 233 aa18.91■□□□□ 0.62
MMP23B-208ENST00000490017 A0A087WZG4 1122 aa18.9■□□□□ 0.62
MMP23B-208ENST00000490017 SNRPA1P09661 255 aaKnown RBP18.9■□□□□ 0.62
MMP23B-208ENST00000490017 YBX3P16989 372 aaKnown RBP eCLIP18.9■□□□□ 0.62
MMP23B-208ENST00000490017 EIF5P55010 431 aaKnown RBP18.9■□□□□ 0.62
MMP23B-208ENST00000490017 PNISRQ8TF01 805 aaKnown RBP18.9■□□□□ 0.62
MMP23B-208ENST00000490017 ZNF330Q9Y3S2 320 aaPredicted RBP18.9■□□□□ 0.62
MMP23B-208ENST00000490017 A1BGP04217 495 aa18.89■□□□□ 0.61
MMP23B-208ENST00000490017 RIPK4P57078 832 aa18.89■□□□□ 0.61
MMP23B-208ENST00000490017 USP16Q9Y5T5 823 aa18.89■□□□□ 0.61
MMP23B-208ENST00000490017 CHD4Q14839 1912 aa18.89■□□□□ 0.61
MMP23B-208ENST00000490017 ZNF316A6NFI3 1004 aaPredicted RBP18.88■□□□□ 0.61
MMP23B-208ENST00000490017 TM4SF1P30408 202 aa18.88■□□□□ 0.61
MMP23B-208ENST00000490017 IL6STP40189 918 aaPredicted RBP18.88■□□□□ 0.61
MMP23B-208ENST00000490017 TGFB2P61812 414 aa18.88■□□□□ 0.61
MMP23B-208ENST00000490017 THUMPD2Q9BTF0 503 aaKnown RBP18.88■□□□□ 0.61
MMP23B-208ENST00000490017 PRAMEF22A3QJZ6 481 aa18.87■□□□□ 0.61
MMP23B-208ENST00000490017 CCDC146Q8IYE0 955 aa18.87■□□□□ 0.61
MMP23B-208ENST00000490017 WWC3Q9ULE0 1092 aa18.87■□□□□ 0.61
MMP23B-208ENST00000490017 ADAMTS8Q9UP79 889 aa18.87■□□□□ 0.61
MMP23B-208ENST00000490017 TMPOP42166 694 aaKnown RBP18.86■□□□□ 0.61
MMP23B-208ENST00000490017 DDR1Q08345 913 aa18.86■□□□□ 0.61
MMP23B-208ENST00000490017 TBC1D2BQ9UPU7 963 aa18.86■□□□□ 0.61
MMP23B-208ENST00000490017 A0A0G2JLW4 131 aa18.85■□□□□ 0.61
MMP23B-208ENST00000490017 POLRMTO00411 1230 aaKnown RBP18.85■□□□□ 0.61
MMP23B-208ENST00000490017 LMOD3Q0VAK6 560 aa18.85■□□□□ 0.61
MMP23B-208ENST00000490017 NFIXQ14938 502 aa18.85■□□□□ 0.61
MMP23B-208ENST00000490017 NEUROD2Q15784 382 aa18.85■□□□□ 0.61
MMP23B-208ENST00000490017 RUNDC1Q96C34 613 aa18.85■□□□□ 0.61
MMP23B-208ENST00000490017 C10orf71Q711Q0 1435 aa18.84■□□□□ 0.61
MMP23B-208ENST00000490017 KIF13BQ9NQT8 1826 aa18.84■□□□□ 0.61
MMP23B-208ENST00000490017 BCL2L12Q9HB09 334 aa18.84■□□□□ 0.61
MMP23B-208ENST00000490017 PIP4K2AP48426 406 aaPredicted RBP18.83■□□□□ 0.6
MMP23B-208ENST00000490017 BICDL1Q6ZP65 573 aa18.83■□□□□ 0.6
MMP23B-208ENST00000490017 RRP7AQ9Y3A4 280 aaKnown RBP18.83■□□□□ 0.6
MMP23B-208ENST00000490017 DPEP1P16444 411 aa18.82■□□□□ 0.6
MMP23B-208ENST00000490017 EIF4A1P60842 406 aaKnown RBP18.82■□□□□ 0.6
MMP23B-208ENST00000490017 PXDNLA1KZ92 1463 aa18.82■□□□□ 0.6
MMP23B-208ENST00000490017 N4BP2Q86UW6 1770 aaPredicted RBP18.81■□□□□ 0.6
MMP23B-208ENST00000490017 GIGYF1O75420 1035 aaPredicted RBP18.81■□□□□ 0.6
MMP23B-208ENST00000490017 SERPINB2P05120 415 aa18.81■□□□□ 0.6
MMP23B-208ENST00000490017 DZIP3Q86Y13 1208 aaKnown RBP18.81■□□□□ 0.6
MMP23B-208ENST00000490017 TSPYL4Q9UJ04 414 aa18.81■□□□□ 0.6
MMP23B-208ENST00000490017 BCS1LQ9Y276 419 aa18.8■□□□□ 0.6
MMP23B-208ENST00000490017 KDM3BQ7LBC6 1761 aa18.8■□□□□ 0.6
MMP23B-208ENST00000490017 TBC1D9BQ66K14 1250 aa18.79■□□□□ 0.6
MMP23B-208ENST00000490017 ZNF784Q8NCA9 323 aaPredicted RBP18.79■□□□□ 0.6
MMP23B-208ENST00000490017 NBPF26B4DH59 902 aa18.78■□□□□ 0.6
MMP23B-208ENST00000490017 CAMTA2O94983 1202 aa18.78■□□□□ 0.6
MMP23B-208ENST00000490017 KCNA3P22001 575 aa18.78■□□□□ 0.6
MMP23B-208ENST00000490017 NBPF10Q6P3W6 841 aaKnown RBP18.78■□□□□ 0.6
MMP23B-208ENST00000490017 NBPF15Q8N660 670 aa18.78■□□□□ 0.6
MMP23B-208ENST00000490017 BABAM1Q9NWV8 329 aa18.78■□□□□ 0.6
MMP23B-208ENST00000490017 PIM2Q9P1W9 311 aa18.78■□□□□ 0.6
MMP23B-208ENST00000490017 AFDNP55196 1824 aaKnown RBP18.77■□□□□ 0.6
MMP23B-208ENST00000490017 SETDB2Q96T68 719 aa18.77■□□□□ 0.6
MMP23B-208ENST00000490017 KIAA1551Q9HCM1 1747 aa18.77■□□□□ 0.59
MMP23B-208ENST00000490017 ANP32CO43423 234 aa18.76■□□□□ 0.59
MMP23B-208ENST00000490017 CHRNA5P30532 468 aa18.76■□□□□ 0.59
MMP23B-208ENST00000490017 CLEC4GQ6UXB4 293 aa18.76■□□□□ 0.59
MMP23B-208ENST00000490017 TRIM35Q9UPQ4 493 aa18.76■□□□□ 0.59
MMP23B-208ENST00000490017 NGEFQ8N5V2 710 aa18.75■□□□□ 0.59
MMP23B-208ENST00000490017 ZNF652Q9Y2D9 606 aa18.75■□□□□ 0.59
MMP23B-208ENST00000490017 LAS1LQ9Y4W2 734 aaKnown RBP18.75■□□□□ 0.59
MMP23B-208ENST00000490017 SCN7AQ01118 1682 aa18.74■□□□□ 0.59
MMP23B-208ENST00000490017 CARMIL3Q8ND23 1372 aa18.74■□□□□ 0.59
MMP23B-208ENST00000490017 NPHP1O15259 732 aa18.74■□□□□ 0.59
MMP23B-208ENST00000490017 DALRD3Q5D0E6 543 aaKnown RBP18.74■□□□□ 0.59
MMP23B-208ENST00000490017 LAMB4A4D0S4 1761 aa18.73■□□□□ 0.59
MMP23B-208ENST00000490017 APAF1O14727 1248 aa18.73■□□□□ 0.59
MMP23B-208ENST00000490017 CCDC184Q52MB2 194 aa18.73■□□□□ 0.59
MMP23B-208ENST00000490017 ARHGAP27Q6ZUM4 889 aa18.73■□□□□ 0.59
MMP23B-208ENST00000490017 NRXN2Q9P2S2 1712 aa18.73■□□□□ 0.59
MMP23B-208ENST00000490017 CHL1O00533 1208 aa18.72■□□□□ 0.59
MMP23B-208ENST00000490017 MYL6BP14649 208 aa18.72■□□□□ 0.59
MMP23B-208ENST00000490017 EIF2S2P20042 333 aaKnown RBP18.72■□□□□ 0.59
MMP23B-208ENST00000490017 BRCA1P38398 1863 aaKnown RBP18.71■□□□□ 0.59
MMP23B-208ENST00000490017 H0YIN7 160 aa18.71■□□□□ 0.59
MMP23B-208ENST00000490017 CNBD1Q8NA66 436 aa18.71■□□□□ 0.59
MMP23B-208ENST00000490017 BRIP1Q9BX63 1249 aa18.71■□□□□ 0.59
MMP23B-208ENST00000490017 BCORQ6W2J9 1755 aa18.7■□□□□ 0.58
MMP23B-208ENST00000490017 RGL2O15211 777 aa18.7■□□□□ 0.58
MMP23B-208ENST00000490017 PDE6BP35913 854 aa18.7■□□□□ 0.58
MMP23B-208ENST00000490017 PRR5LQ6MZQ0 368 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms