RNA–Protein interactions for RNA: ENST00000490008.1

COMMD2-206, Transcript of COMM domain containing 2, humanhuman

TSL 2

Gene COMMD2, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-206ENST00000490008 SSFA2P28290 1259 aa18.48■□□□□ 0.55
COMMD2-206ENST00000490008 RFC4P35249 363 aa18.48■□□□□ 0.55
COMMD2-206ENST00000490008 KRT24Q2M2I5 525 aa18.48■□□□□ 0.55
COMMD2-206ENST00000490008 NECTIN2Q92692 538 aa18.48■□□□□ 0.55
COMMD2-206ENST00000490008 ZNF521Q96K83 1311 aa18.48■□□□□ 0.55
COMMD2-206ENST00000490008 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.47■□□□□ 0.55
COMMD2-206ENST00000490008 SLFN5Q08AF3 891 aa18.47■□□□□ 0.55
COMMD2-206ENST00000490008 C8orf58Q8NAV2 365 aa18.47■□□□□ 0.55
COMMD2-206ENST00000490008 SPINK5Q9NQ38 1064 aaPredicted RBP18.47■□□□□ 0.55
COMMD2-206ENST00000490008 KCPQ6ZWJ8 1503 aa18.46■□□□□ 0.55
COMMD2-206ENST00000490008 A0A087WZG4 1122 aa18.46■□□□□ 0.55
COMMD2-206ENST00000490008 HOXB7P09629 217 aa18.46■□□□□ 0.55
COMMD2-206ENST00000490008 EXOSC9Q06265 439 aaKnown RBP18.46■□□□□ 0.55
COMMD2-206ENST00000490008 HDGFL1Q5TGJ6 251 aa18.46■□□□□ 0.55
COMMD2-206ENST00000490008 COL23A1Q86Y22 540 aaPredicted RBP18.46■□□□□ 0.55
COMMD2-206ENST00000490008 CDCA7LQ96GN5 454 aa18.46■□□□□ 0.55
COMMD2-206ENST00000490008 ZBTB1Q9Y2K1 713 aa18.46■□□□□ 0.55
COMMD2-206ENST00000490008 FANCIQ9NVI1 1328 aa18.46■□□□□ 0.55
COMMD2-206ENST00000490008 ADRA2BP18089 450 aa18.45■□□□□ 0.54
COMMD2-206ENST00000490008 IL6STP40189 918 aaPredicted RBP18.45■□□□□ 0.54
COMMD2-206ENST00000490008 TWISTNBQ3B726 338 aaPredicted RBP18.45■□□□□ 0.54
COMMD2-206ENST00000490008 SMIM5Q71RC9 77 aa18.45■□□□□ 0.54
COMMD2-206ENST00000490008 ARHGEF1Q92888 912 aaKnown RBP18.45■□□□□ 0.54
COMMD2-206ENST00000490008 ZPR1O75312 459 aa18.44■□□□□ 0.54
COMMD2-206ENST00000490008 MYL6BP14649 208 aa18.44■□□□□ 0.54
COMMD2-206ENST00000490008 CCDC30Q5VVM6 783 aa18.44■□□□□ 0.54
COMMD2-206ENST00000490008 SOS1Q07889 1333 aaPredicted RBP18.44■□□□□ 0.54
COMMD2-206ENST00000490008 PNPLA7Q6ZV29 1317 aa18.44■□□□□ 0.54
COMMD2-206ENST00000490008 RGPD3A6NKT7 1758 aaPredicted RBP18.43■□□□□ 0.54
COMMD2-206ENST00000490008 RGPD4Q7Z3J3 1758 aa18.43■□□□□ 0.54
COMMD2-206ENST00000490008 PIP4K2AP48426 406 aaPredicted RBP18.43■□□□□ 0.54
COMMD2-206ENST00000490008 TSPYL6Q8N831 410 aa18.43■□□□□ 0.54
COMMD2-206ENST00000490008 SLC16A10Q8TF71 515 aa18.43■□□□□ 0.54
COMMD2-206ENST00000490008 YTHDC1Q96MU7 727 aaKnown RBP18.43■□□□□ 0.54
COMMD2-206ENST00000490008 EIF5P55010 431 aaKnown RBP18.42■□□□□ 0.54
COMMD2-206ENST00000490008 DBF4Q9UBU7 674 aaPredicted RBP18.42■□□□□ 0.54
COMMD2-206ENST00000490008 LY75O60449 1722 aa18.42■□□□□ 0.54
COMMD2-206ENST00000490008 STK31Q9BXU1 1019 aa18.41■□□□□ 0.54
COMMD2-206ENST00000490008 ERBB4Q15303 1308 aa18.41■□□□□ 0.54
COMMD2-206ENST00000490008 ZBED9Q6R2W3 1325 aa18.41■□□□□ 0.54
COMMD2-206ENST00000490008 SIPA1L3O60292 1781 aaPredicted RBP18.4■□□□□ 0.54
COMMD2-206ENST00000490008 NBPF26B4DH59 902 aa18.4■□□□□ 0.54
COMMD2-206ENST00000490008 ZBTB7AO95365 584 aa18.4■□□□□ 0.54
COMMD2-206ENST00000490008 NBPF10Q6P3W6 841 aaKnown RBP18.4■□□□□ 0.54
COMMD2-206ENST00000490008 NBPF15Q8N660 670 aa18.4■□□□□ 0.54
COMMD2-206ENST00000490008 PDGFDQ9GZP0 370 aaPredicted RBP18.4■□□□□ 0.54
COMMD2-206ENST00000490008 TBC1D2BQ9UPU7 963 aa18.4■□□□□ 0.54
COMMD2-206ENST00000490008 ATF5Q9Y2D1 282 aaPredicted RBP18.4■□□□□ 0.54
COMMD2-206ENST00000490008 VAMP4O75379 141 aa18.39■□□□□ 0.53
COMMD2-206ENST00000490008 AMIGO3Q86WK7 504 aa18.39■□□□□ 0.53
COMMD2-206ENST00000490008 DDX21Q9NR30 783 aaKnown RBP eCLIP18.39■□□□□ 0.53
COMMD2-206ENST00000490008 HYPKQ9NX55 129 aa18.39■□□□□ 0.53
COMMD2-206ENST00000490008 VIRMAQ69YN4 1812 aaKnown RBP18.39■□□□□ 0.53
COMMD2-206ENST00000490008 AIMP1Q12904 312 aaKnown RBP18.38■□□□□ 0.53
COMMD2-206ENST00000490008 KIF6Q6ZMV9 814 aa18.38■□□□□ 0.53
COMMD2-206ENST00000490008 DZIP3Q86Y13 1208 aaKnown RBP18.38■□□□□ 0.53
COMMD2-206ENST00000490008 TRMT2AQ8IZ69 625 aaKnown RBP18.38■□□□□ 0.53
COMMD2-206ENST00000490008 NLGN1Q8N2Q7 840 aa18.38■□□□□ 0.53
COMMD2-206ENST00000490008 MTFR1LQ9H019 292 aa18.38■□□□□ 0.53
COMMD2-206ENST00000490008 CHPF2Q9P2E5 772 aa18.38■□□□□ 0.53
COMMD2-206ENST00000490008 NARFQ9UHQ1 456 aa18.38■□□□□ 0.53
COMMD2-206ENST00000490008 PAPPAQ13219 1627 aa18.38■□□□□ 0.53
COMMD2-206ENST00000490008 RREB1Q92766 1687 aa18.38■□□□□ 0.53
COMMD2-206ENST00000490008 TCERG1O14776 1098 aaKnown RBP18.37■□□□□ 0.53
COMMD2-206ENST00000490008 ANXA1P04083 346 aa18.37■□□□□ 0.53
COMMD2-206ENST00000490008 USPL1Q5W0Q7 1092 aa18.37■□□□□ 0.53
COMMD2-206ENST00000490008 SPON1Q9HCB6 807 aa18.37■□□□□ 0.53
COMMD2-206ENST00000490008 SLC4A2P04920 1241 aa18.36■□□□□ 0.53
COMMD2-206ENST00000490008 C4BP0C0L5 1744 aa18.36■□□□□ 0.53
COMMD2-206ENST00000490008 POLD1P28340 1107 aa18.36■□□□□ 0.53
COMMD2-206ENST00000490008 PDIA6Q15084 440 aa18.36■□□□□ 0.53
COMMD2-206ENST00000490008 NUP188Q5SRE5 1749 aa18.36■□□□□ 0.53
COMMD2-206ENST00000490008 COPS6Q7L5N1 327 aa18.36■□□□□ 0.53
COMMD2-206ENST00000490008 SRP68Q9UHB9 627 aaKnown RBP18.36■□□□□ 0.53
COMMD2-206ENST00000490008 COL15A1P39059 1388 aa18.35■□□□□ 0.53
COMMD2-206ENST00000490008 PROSER3Q2NL68 480 aa18.35■□□□□ 0.53
COMMD2-206ENST00000490008 MSL1Q68DK7 614 aa18.35■□□□□ 0.53
COMMD2-206ENST00000490008 ZNF831Q5JPB2 1677 aa18.34■□□□□ 0.53
COMMD2-206ENST00000490008 XAGE3Q8WTP9 111 aa18.34■□□□□ 0.53
COMMD2-206ENST00000490008 ZNF652Q9Y2D9 606 aa18.34■□□□□ 0.53
COMMD2-206ENST00000490008 KDM3BQ7LBC6 1761 aa18.34■□□□□ 0.53
COMMD2-206ENST00000490008 C5P01031 1676 aa18.34■□□□□ 0.53
COMMD2-206ENST00000490008 UBR2Q8IWV8 1755 aa18.33■□□□□ 0.53
COMMD2-206ENST00000490008 USP42Q9H9J4 1324 aaKnown RBP18.33■□□□□ 0.53
COMMD2-206ENST00000490008 CT47B1P0C2W7 299 aaPredicted RBP18.33■□□□□ 0.52
COMMD2-206ENST00000490008 GYS1P13807 737 aa18.33■□□□□ 0.52
COMMD2-206ENST00000490008 TTLL7Q6ZT98 887 aa18.33■□□□□ 0.52
COMMD2-206ENST00000490008 ZNF428Q96B54 188 aa18.33■□□□□ 0.52
COMMD2-206ENST00000490008 ERVV-1B6SEH8 477 aa18.32■□□□□ 0.52
COMMD2-206ENST00000490008 DDX58O95786 925 aaKnown RBP18.32■□□□□ 0.52
COMMD2-206ENST00000490008 ANKRD13DQ6ZTN6 518 aa18.32■□□□□ 0.52
COMMD2-206ENST00000490008 CAMTA2O94983 1202 aa18.31■□□□□ 0.52
COMMD2-206ENST00000490008 FKBP8Q14318 412 aa18.31■□□□□ 0.52
COMMD2-206ENST00000490008 CLEC4GQ6UXB4 293 aa18.31■□□□□ 0.52
COMMD2-206ENST00000490008 BICDL1Q6ZP65 573 aa18.31■□□□□ 0.52
COMMD2-206ENST00000490008 RIC3Q7Z5B4 369 aa18.31■□□□□ 0.52
COMMD2-206ENST00000490008 ZBTB3Q9H5J0 574 aa18.31■□□□□ 0.52
COMMD2-206ENST00000490008 PPP1R1BQ9UD71 204 aaPredicted RBP18.31■□□□□ 0.52
COMMD2-206ENST00000490008 PARP3Q9Y6F1 533 aa18.31■□□□□ 0.52
COMMD2-206ENST00000490008 TJP1Q07157 1748 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms