RNA–Protein interactions for RNA: ENST00000489444.6

GBP3-207, Transcript of guanylate binding protein 3, humanhuman

TSL 1 (best)

Gene GBP3, Length 2,455 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBP3-207ENST00000489444 COL23A1Q86Y22 540 aaPredicted RBP6.4□□□□□ -1.39
GBP3-207ENST00000489444 SGIP1Q9BQI5 828 aa6.4□□□□□ -1.39
GBP3-207ENST00000489444 RBM19Q9Y4C8 960 aaKnown RBP6.4□□□□□ -1.39
GBP3-207ENST00000489444 UBR2Q8IWV8 1755 aa6.4□□□□□ -1.39
GBP3-207ENST00000489444 CEMIPQ8WUJ3 1361 aa6.4□□□□□ -1.39
GBP3-207ENST00000489444 TEFQ10587 303 aa6.39□□□□□ -1.39
GBP3-207ENST00000489444 PHACTR3Q96KR7 559 aa6.39□□□□□ -1.39
GBP3-207ENST00000489444 GNPATO15228 680 aa6.39□□□□□ -1.39
GBP3-207ENST00000489444 RTF1Q92541 710 aaKnown RBP6.39□□□□□ -1.39
GBP3-207ENST00000489444 SLC4A9Q96Q91 983 aa6.39□□□□□ -1.39
GBP3-207ENST00000489444 KAT6BQ8WYB5 2073 aa6.39□□□□□ -1.39
GBP3-207ENST00000489444 TTC5Q8N0Z6 440 aa6.38□□□□□ -1.39
GBP3-207ENST00000489444 IL17REQ8NFR9 667 aa6.38□□□□□ -1.39
GBP3-207ENST00000489444 RTCBQ9Y3I0 505 aaKnown RBP6.38□□□□□ -1.39
GBP3-207ENST00000489444 MAPK8IP3Q9UPT6 1336 aa6.38□□□□□ -1.39
GBP3-207ENST00000489444 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.38□□□□□ -1.39
GBP3-207ENST00000489444 PTCD1O75127 700 aaKnown RBP6.38□□□□□ -1.39
GBP3-207ENST00000489444 PLEKHF1Q96S99 279 aa6.38□□□□□ -1.39
GBP3-207ENST00000489444 PRKRIP1Q9H875 184 aaPredicted RBP6.38□□□□□ -1.39
GBP3-207ENST00000489444 EIF5BO60841 1220 aaKnown RBP6.37□□□□□ -1.39
GBP3-207ENST00000489444 RPS6KA4O75676 772 aa6.37□□□□□ -1.39
GBP3-207ENST00000489444 PHF14O94880 888 aa6.37□□□□□ -1.39
GBP3-207ENST00000489444 NFE2L2Q16236 605 aa6.37□□□□□ -1.39
GBP3-207ENST00000489444 TRAPPC3LQ5T215 181 aa6.37□□□□□ -1.39
GBP3-207ENST00000489444 PLCD3Q8N3E9 789 aa6.37□□□□□ -1.39
GBP3-207ENST00000489444 CIZ1Q9ULV3 898 aaPredicted RBP6.37□□□□□ -1.39
GBP3-207ENST00000489444 CRKLP46109 303 aaKnown RBP6.37□□□□□ -1.39
GBP3-207ENST00000489444 POLA2Q14181 598 aa6.37□□□□□ -1.39
GBP3-207ENST00000489444 WDR43Q15061 677 aaKnown RBP eCLIP6.37□□□□□ -1.39
GBP3-207ENST00000489444 TEX13AQ9BXU3 409 aaPredicted RBP6.37□□□□□ -1.39
GBP3-207ENST00000489444 HEG1Q9ULI3 1381 aa6.36□□□□□ -1.39
GBP3-207ENST00000489444 BTBD11A6QL63 1104 aa6.36□□□□□ -1.39
GBP3-207ENST00000489444 SLC39A6Q13433 755 aa6.36□□□□□ -1.39
GBP3-207ENST00000489444 ZNF790Q6PG37 636 aa6.36□□□□□ -1.39
GBP3-207ENST00000489444 HS6ST3Q8IZP7 471 aa6.36□□□□□ -1.39
GBP3-207ENST00000489444 PNISRQ8TF01 805 aaKnown RBP6.36□□□□□ -1.39
GBP3-207ENST00000489444 FMNL2Q96PY5 1086 aa6.36□□□□□ -1.39
GBP3-207ENST00000489444 FHDC1Q9C0D6 1143 aaPredicted RBP6.36□□□□□ -1.39
GBP3-207ENST00000489444 CCDC87Q9NVE4 849 aa6.36□□□□□ -1.39
GBP3-207ENST00000489444 C4AP0C0L4 1744 aa6.36□□□□□ -1.39
GBP3-207ENST00000489444 CYP19A1P11511 503 aaPredicted RBP6.36□□□□□ -1.39
GBP3-207ENST00000489444 LMOD3Q0VAK6 560 aa6.36□□□□□ -1.39
GBP3-207ENST00000489444 MCM10Q7L590 875 aa6.36□□□□□ -1.39
GBP3-207ENST00000489444 AMIGO3Q86WK7 504 aa6.36□□□□□ -1.39
GBP3-207ENST00000489444 DNAJC10Q8IXB1 793 aa6.36□□□□□ -1.39
GBP3-207ENST00000489444 STARD3NLO95772 234 aa6.35□□□□□ -1.39
GBP3-207ENST00000489444 RFC4P35249 363 aa6.35□□□□□ -1.39
GBP3-207ENST00000489444 TAF7Q15545 349 aaPredicted RBP6.35□□□□□ -1.39
GBP3-207ENST00000489444 MSL1Q68DK7 614 aa6.35□□□□□ -1.39
GBP3-207ENST00000489444 INTS5Q6P9B9 1019 aaKnown RBP6.35□□□□□ -1.39
GBP3-207ENST00000489444 SYT17Q9BSW7 474 aa6.35□□□□□ -1.39
GBP3-207ENST00000489444 SOS1Q07889 1333 aaPredicted RBP6.35□□□□□ -1.39
GBP3-207ENST00000489444 FANCIQ9NVI1 1328 aa6.35□□□□□ -1.39
GBP3-207ENST00000489444 A0A087WZG4 1122 aa6.35□□□□□ -1.39
GBP3-207ENST00000489444 NLGN1Q8N2Q7 840 aa6.35□□□□□ -1.39
GBP3-207ENST00000489444 ARHGEF1Q92888 912 aaKnown RBP6.35□□□□□ -1.39
GBP3-207ENST00000489444 RNF25Q96BH1 459 aaPredicted RBP6.35□□□□□ -1.39
GBP3-207ENST00000489444 RUNDC1Q96C34 613 aa6.35□□□□□ -1.39
GBP3-207ENST00000489444 DLG5Q8TDM6 1919 aa6.35□□□□□ -1.39
GBP3-207ENST00000489444 KDM3BQ7LBC6 1761 aa6.35□□□□□ -1.39
GBP3-207ENST00000489444 COL15A1P39059 1388 aa6.34□□□□□ -1.39
GBP3-207ENST00000489444 ZNF496Q96IT1 587 aaPredicted RBP6.34□□□□□ -1.39
GBP3-207ENST00000489444 CD2APQ9Y5K6 639 aa6.34□□□□□ -1.39
GBP3-207ENST00000489444 USP42Q9H9J4 1324 aaKnown RBP6.34□□□□□ -1.39
GBP3-207ENST00000489444 LAMB4A4D0S4 1761 aa6.34□□□□□ -1.39
GBP3-207ENST00000489444 GYS1P13807 737 aa6.34□□□□□ -1.4
GBP3-207ENST00000489444 BABAM1Q9NWV8 329 aa6.34□□□□□ -1.4
GBP3-207ENST00000489444 PODXL2Q9NZ53 605 aa6.34□□□□□ -1.4
GBP3-207ENST00000489444 SCN7AQ01118 1682 aa6.33□□□□□ -1.4
GBP3-207ENST00000489444 ANP32CO43423 234 aa6.33□□□□□ -1.4
GBP3-207ENST00000489444 SNRPA1P09661 255 aaKnown RBP6.33□□□□□ -1.4
GBP3-207ENST00000489444 TMPOP42166 694 aaKnown RBP6.33□□□□□ -1.4
GBP3-207ENST00000489444 RIPK4P57078 832 aa6.33□□□□□ -1.4
GBP3-207ENST00000489444 DCTN1Q14203 1278 aa6.33□□□□□ -1.4
GBP3-207ENST00000489444 SMIM5Q71RC9 77 aa6.33□□□□□ -1.4
GBP3-207ENST00000489444 MYH14Q7Z406 1995 aaKnown RBP6.33□□□□□ -1.4
GBP3-207ENST00000489444 ZPR1O75312 459 aa6.33□□□□□ -1.4
GBP3-207ENST00000489444 SPINK5Q9NQ38 1064 aaPredicted RBP6.33□□□□□ -1.4
GBP3-207ENST00000489444 NARFQ9UHQ1 456 aa6.33□□□□□ -1.4
GBP3-207ENST00000489444 ZBTB1Q9Y2K1 713 aa6.33□□□□□ -1.4
GBP3-207ENST00000489444 PARP3Q9Y6F1 533 aa6.33□□□□□ -1.4
GBP3-207ENST00000489444 C10orf71Q711Q0 1435 aa6.32□□□□□ -1.4
GBP3-207ENST00000489444 KIF13BQ9NQT8 1826 aa6.32□□□□□ -1.4
GBP3-207ENST00000489444 KCNQ3O43525 872 aa6.32□□□□□ -1.4
GBP3-207ENST00000489444 MMP10P09238 476 aa6.32□□□□□ -1.4
GBP3-207ENST00000489444 IL6STP40189 918 aaPredicted RBP6.32□□□□□ -1.4
GBP3-207ENST00000489444 ADAMTS8Q9UP79 889 aa6.32□□□□□ -1.4
GBP3-207ENST00000489444 EIF5P55010 431 aaKnown RBP6.32□□□□□ -1.4
GBP3-207ENST00000489444 CCDC146Q8IYE0 955 aa6.32□□□□□ -1.4
GBP3-207ENST00000489444 SRP68Q9UHB9 627 aaKnown RBP6.32□□□□□ -1.4
GBP3-207ENST00000489444 BCORQ6W2J9 1755 aa6.31□□□□□ -1.4
GBP3-207ENST00000489444 CANXP27824 592 aaKnown RBP6.31□□□□□ -1.4
GBP3-207ENST00000489444 USPL1Q5W0Q7 1092 aa6.31□□□□□ -1.4
GBP3-207ENST00000489444 NPM2Q86SE8 214 aaKnown RBP6.31□□□□□ -1.4
GBP3-207ENST00000489444 NLGN2Q8NFZ4 835 aa6.31□□□□□ -1.4
GBP3-207ENST00000489444 EIF4A1P60842 406 aaKnown RBP6.31□□□□□ -1.4
GBP3-207ENST00000489444 TGFB2P61812 414 aa6.31□□□□□ -1.4
GBP3-207ENST00000489444 TSPYL4Q9UJ04 414 aa6.31□□□□□ -1.4
GBP3-207ENST00000489444 NRXN2Q9P2S2 1712 aa6.31□□□□□ -1.4
GBP3-207ENST00000489444 KIAA1551Q9HCM1 1747 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms