RNA–Protein interactions for RNA: ENST00000489430.1

MRPL55-230, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-230ENST00000489430 COL15A1P39059 1388 aa25.11■■□□□ 1.61
MRPL55-230ENST00000489430 DCTN1Q14203 1278 aa25.11■■□□□ 1.61
MRPL55-230ENST00000489430 NARFQ9UHQ1 456 aa25.11■■□□□ 1.61
MRPL55-230ENST00000489430 A0A087WZG4 1122 aa25.1■■□□□ 1.61
MRPL55-230ENST00000489430 YY1P25490 414 aa25.1■■□□□ 1.61
MRPL55-230ENST00000489430 EIF5P55010 431 aaKnown RBP25.1■■□□□ 1.61
MRPL55-230ENST00000489430 PARP3Q9Y6F1 533 aa25.1■■□□□ 1.61
MRPL55-230ENST00000489430 GRIN3BO60391 1043 aa25.09■■□□□ 1.61
MRPL55-230ENST00000489430 SNRPA1P09661 255 aaKnown RBP25.09■■□□□ 1.61
MRPL55-230ENST00000489430 KCNQ3O43525 872 aa25.08■■□□□ 1.61
MRPL55-230ENST00000489430 IL6STP40189 918 aaPredicted RBP25.08■■□□□ 1.61
MRPL55-230ENST00000489430 SRP68Q9UHB9 627 aaKnown RBP25.08■■□□□ 1.61
MRPL55-230ENST00000489430 C4AP0C0L4 1744 aa25.08■■□□□ 1.61
MRPL55-230ENST00000489430 CANXP27824 592 aaKnown RBP25.07■■□□□ 1.6
MRPL55-230ENST00000489430 TGFB2P61812 414 aa25.07■■□□□ 1.6
MRPL55-230ENST00000489430 LMOD3Q0VAK6 560 aa25.07■■□□□ 1.6
MRPL55-230ENST00000489430 FKBP8Q14318 412 aa25.07■■□□□ 1.6
MRPL55-230ENST00000489430 WDR43Q15061 677 aaKnown RBP eCLIP25.07■■□□□ 1.6
MRPL55-230ENST00000489430 ZNF316A6NFI3 1004 aaPredicted RBP25.06■■□□□ 1.6
MRPL55-230ENST00000489430 USPL1Q5W0Q7 1092 aa25.06■■□□□ 1.6
MRPL55-230ENST00000489430 TM4SF1P30408 202 aa25.05■■□□□ 1.6
MRPL55-230ENST00000489430 C10orf71Q711Q0 1435 aa25.04■■□□□ 1.6
MRPL55-230ENST00000489430 BABAM1Q9NWV8 329 aa25.04■■□□□ 1.6
MRPL55-230ENST00000489430 GOLGB1Q14789 3259 aaKnown RBP25.04■■□□□ 1.6
MRPL55-230ENST00000489430 TMPOP42166 694 aaKnown RBP25.03■■□□□ 1.6
MRPL55-230ENST00000489430 RIPK4P57078 832 aa25.03■■□□□ 1.6
MRPL55-230ENST00000489430 NPM2Q86SE8 214 aaKnown RBP25.03■■□□□ 1.6
MRPL55-230ENST00000489430 RUNDC1Q96C34 613 aa25.03■■□□□ 1.6
MRPL55-230ENST00000489430 PELP1Q8IZL8 1130 aaKnown RBP25.02■■□□□ 1.6
MRPL55-230ENST00000489430 USP16Q9Y5T5 823 aa25.02■■□□□ 1.6
MRPL55-230ENST00000489430 A1BGP04217 495 aa25.01■■□□□ 1.59
MRPL55-230ENST00000489430 YBX3P16989 372 aaKnown RBP eCLIP25.01■■□□□ 1.59
MRPL55-230ENST00000489430 DDR1Q08345 913 aa25.01■■□□□ 1.59
MRPL55-230ENST00000489430 ADAMTS8Q9UP79 889 aa25.01■■□□□ 1.59
MRPL55-230ENST00000489430 POLRMTO00411 1230 aaKnown RBP25■■□□□ 1.59
MRPL55-230ENST00000489430 BCL2L12Q9HB09 334 aa25■■□□□ 1.59
MRPL55-230ENST00000489430 RGL2O15211 777 aa24.98■■□□□ 1.59
MRPL55-230ENST00000489430 NFIXQ14938 502 aa24.98■■□□□ 1.59
MRPL55-230ENST00000489430 THUMPD2Q9BTF0 503 aaKnown RBP24.98■■□□□ 1.59
MRPL55-230ENST00000489430 MIS18AQ9NYP9 233 aa24.98■■□□□ 1.59
MRPL55-230ENST00000489430 KIF13BQ9NQT8 1826 aa24.98■■□□□ 1.59
MRPL55-230ENST00000489430 PXDNLA1KZ92 1463 aa24.97■■□□□ 1.59
MRPL55-230ENST00000489430 EIF4A1P60842 406 aaKnown RBP24.97■■□□□ 1.59
MRPL55-230ENST00000489430 DLG5Q8TDM6 1919 aa24.96■■□□□ 1.59
MRPL55-230ENST00000489430 PRAMEF22A3QJZ6 481 aa24.96■■□□□ 1.59
MRPL55-230ENST00000489430 GIGYF1O75420 1035 aaPredicted RBP24.96■■□□□ 1.59
MRPL55-230ENST00000489430 CLEC4GQ6UXB4 293 aa24.94■■□□□ 1.58
MRPL55-230ENST00000489430 CCDC146Q8IYE0 955 aa24.94■■□□□ 1.58
MRPL55-230ENST00000489430 TSPYL4Q9UJ04 414 aa24.94■■□□□ 1.58
MRPL55-230ENST00000489430 TBC1D2BQ9UPU7 963 aa24.94■■□□□ 1.58
MRPL55-230ENST00000489430 ZNF330Q9Y3S2 320 aaPredicted RBP24.94■■□□□ 1.58
MRPL55-230ENST00000489430 DZIP3Q86Y13 1208 aaKnown RBP24.93■■□□□ 1.58
MRPL55-230ENST00000489430 A0A0G2JLW4 131 aa24.92■■□□□ 1.58
MRPL55-230ENST00000489430 CAMTA2O94983 1202 aa24.92■■□□□ 1.58
MRPL55-230ENST00000489430 SERPINB2P05120 415 aa24.92■■□□□ 1.58
MRPL55-230ENST00000489430 KDM3BQ7LBC6 1761 aa24.92■■□□□ 1.58
MRPL55-230ENST00000489430 NBPF26B4DH59 902 aa24.91■■□□□ 1.58
MRPL55-230ENST00000489430 DPEP1P16444 411 aa24.91■■□□□ 1.58
MRPL55-230ENST00000489430 NBPF10Q6P3W6 841 aaKnown RBP24.91■■□□□ 1.58
MRPL55-230ENST00000489430 NBPF15Q8N660 670 aa24.91■■□□□ 1.58
MRPL55-230ENST00000489430 ERBB4Q15303 1308 aa24.9■■□□□ 1.58
MRPL55-230ENST00000489430 TRIM35Q9UPQ4 493 aa24.9■■□□□ 1.58
MRPL55-230ENST00000489430 ZNF652Q9Y2D9 606 aa24.9■■□□□ 1.58
MRPL55-230ENST00000489430 RRP7AQ9Y3A4 280 aaKnown RBP24.9■■□□□ 1.58
MRPL55-230ENST00000489430 NEUROD2Q15784 382 aa24.89■■□□□ 1.58
MRPL55-230ENST00000489430 TBC1D9BQ66K14 1250 aa24.89■■□□□ 1.58
MRPL55-230ENST00000489430 PIM2Q9P1W9 311 aa24.89■■□□□ 1.58
MRPL55-230ENST00000489430 CARMIL3Q8ND23 1372 aa24.89■■□□□ 1.57
MRPL55-230ENST00000489430 CHD4Q14839 1912 aa24.88■■□□□ 1.57
MRPL55-230ENST00000489430 CHL1O00533 1208 aa24.88■■□□□ 1.57
MRPL55-230ENST00000489430 ANP32CO43423 234 aa24.88■■□□□ 1.57
MRPL55-230ENST00000489430 KCNA3P22001 575 aa24.88■■□□□ 1.57
MRPL55-230ENST00000489430 SETDB2Q96T68 719 aa24.88■■□□□ 1.57
MRPL55-230ENST00000489430 PDZRN3Q9UPQ7 1066 aa24.88■■□□□ 1.57
MRPL55-230ENST00000489430 SCN7AQ01118 1682 aa24.88■■□□□ 1.57
MRPL55-230ENST00000489430 KIAA1551Q9HCM1 1747 aa24.86■■□□□ 1.57
MRPL55-230ENST00000489430 NRXN2Q9P2S2 1712 aa24.86■■□□□ 1.57
MRPL55-230ENST00000489430 ZNF784Q8NCA9 323 aaPredicted RBP24.86■■□□□ 1.57
MRPL55-230ENST00000489430 PIP4K2AP48426 406 aaPredicted RBP24.85■■□□□ 1.57
MRPL55-230ENST00000489430 BICDL1Q6ZP65 573 aa24.85■■□□□ 1.57
MRPL55-230ENST00000489430 BCS1LQ9Y276 419 aa24.85■■□□□ 1.57
MRPL55-230ENST00000489430 ERVV-1B6SEH8 477 aa24.84■■□□□ 1.57
MRPL55-230ENST00000489430 CALD1Q05682 793 aaKnown RBP24.84■■□□□ 1.57
MRPL55-230ENST00000489430 DALRD3Q5D0E6 543 aaKnown RBP24.84■■□□□ 1.57
MRPL55-230ENST00000489430 LAMB4A4D0S4 1761 aa24.84■■□□□ 1.57
MRPL55-230ENST00000489430 CFAP44Q96MT7 982 aa24.83■■□□□ 1.57
MRPL55-230ENST00000489430 BRIP1Q9BX63 1249 aa24.83■■□□□ 1.57
MRPL55-230ENST00000489430 APAF1O14727 1248 aa24.82■■□□□ 1.56
MRPL55-230ENST00000489430 PDE6BP35913 854 aa24.81■■□□□ 1.56
MRPL55-230ENST00000489430 WWC3Q9ULE0 1092 aa24.81■■□□□ 1.56
MRPL55-230ENST00000489430 HOXB7P09629 217 aa24.8■■□□□ 1.56
MRPL55-230ENST00000489430 CHRNA5P30532 468 aa24.8■■□□□ 1.56
MRPL55-230ENST00000489430 PRR5LQ6MZQ0 368 aa24.8■■□□□ 1.56
MRPL55-230ENST00000489430 CNBD1Q8NA66 436 aa24.8■■□□□ 1.56
MRPL55-230ENST00000489430 H0YIN7 160 aa24.79■■□□□ 1.56
MRPL55-230ENST00000489430 NCBP3Q53F19 620 aaKnown RBP24.79■■□□□ 1.56
MRPL55-230ENST00000489430 KIF6Q6ZMV9 814 aa24.79■■□□□ 1.56
MRPL55-230ENST00000489430 BCORQ6W2J9 1755 aa24.79■■□□□ 1.56
MRPL55-230ENST00000489430 N4BP2Q86UW6 1770 aaPredicted RBP24.79■■□□□ 1.56
MRPL55-230ENST00000489430 ST5P78524 1137 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms