RNA–Protein interactions for RNA: ENST00000489300.1

CDK11A-218, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 3

Gene CDK11A, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-218ENST00000489300 C5P01031 1676 aa22.68■■□□□ 1.22
CDK11A-218ENST00000489300 C4BP0C0L5 1744 aa22.67■■□□□ 1.22
CDK11A-218ENST00000489300 DLG5Q8TDM6 1919 aa22.67■■□□□ 1.22
CDK11A-218ENST00000489300 ZBTB7AO95365 584 aa22.66■■□□□ 1.22
CDK11A-218ENST00000489300 ZNF853P0CG23 659 aa22.66■■□□□ 1.22
CDK11A-218ENST00000489300 CANXP27824 592 aaKnown RBP22.66■■□□□ 1.22
CDK11A-218ENST00000489300 POLD1P28340 1107 aa22.66■■□□□ 1.22
CDK11A-218ENST00000489300 USP16Q9Y5T5 823 aa22.66■■□□□ 1.22
CDK11A-218ENST00000489300 SIPA1L3O60292 1781 aaPredicted RBP22.66■■□□□ 1.22
CDK11A-218ENST00000489300 ZPR1O75312 459 aa22.65■■□□□ 1.22
CDK11A-218ENST00000489300 HOXB7P09629 217 aa22.65■■□□□ 1.22
CDK11A-218ENST00000489300 IL6STP40189 918 aaPredicted RBP22.65■■□□□ 1.22
CDK11A-218ENST00000489300 MBIPQ9NS73 344 aa22.65■■□□□ 1.22
CDK11A-218ENST00000489300 ARHGEF1Q92888 912 aaKnown RBP22.64■■□□□ 1.21
CDK11A-218ENST00000489300 MYH16Q9H6N6 1097 aa22.64■■□□□ 1.21
CDK11A-218ENST00000489300 ZBTB1Q9Y2K1 713 aa22.64■■□□□ 1.21
CDK11A-218ENST00000489300 SENP3-EIF4A1A0A087X0R7 540 aa22.63■■□□□ 1.21
CDK11A-218ENST00000489300 VIRMAQ69YN4 1812 aaKnown RBP22.63■■□□□ 1.21
CDK11A-218ENST00000489300 SOS1Q07889 1333 aaPredicted RBP22.62■■□□□ 1.21
CDK11A-218ENST00000489300 ERBB4Q15303 1308 aa22.62■■□□□ 1.21
CDK11A-218ENST00000489300 A1BGP04217 495 aa22.62■■□□□ 1.21
CDK11A-218ENST00000489300 NLGN1Q8N2Q7 840 aa22.62■■□□□ 1.21
CDK11A-218ENST00000489300 PDGFDQ9GZP0 370 aaPredicted RBP22.62■■□□□ 1.21
CDK11A-218ENST00000489300 PPP1R1BQ9UD71 204 aaPredicted RBP22.62■■□□□ 1.21
CDK11A-218ENST00000489300 ATF5Q9Y2D1 282 aaPredicted RBP22.62■■□□□ 1.21
CDK11A-218ENST00000489300 ZNF330Q9Y3S2 320 aaPredicted RBP22.62■■□□□ 1.21
CDK11A-218ENST00000489300 GOLGA2Q08379 1002 aa22.61■■□□□ 1.21
CDK11A-218ENST00000489300 UBR2Q8IWV8 1755 aa22.61■■□□□ 1.21
CDK11A-218ENST00000489300 CICQ96RK0 1608 aaPredicted RBP22.6■■□□□ 1.21
CDK11A-218ENST00000489300 PRAMEF22A3QJZ6 481 aa22.6■■□□□ 1.21
CDK11A-218ENST00000489300 EIF2S2P20042 333 aaKnown RBP22.6■■□□□ 1.21
CDK11A-218ENST00000489300 EIF5P55010 431 aaKnown RBP22.6■■□□□ 1.21
CDK11A-218ENST00000489300 ARXQ96QS3 562 aa22.6■■□□□ 1.21
CDK11A-218ENST00000489300 DUSP27Q5VZP5 1158 aa22.58■■□□□ 1.21
CDK11A-218ENST00000489300 NARFQ9UHQ1 456 aa22.58■■□□□ 1.21
CDK11A-218ENST00000489300 TAF1LQ8IZX4 1826 aa22.58■■□□□ 1.21
CDK11A-218ENST00000489300 COL15A1P39059 1388 aa22.58■■□□□ 1.21
CDK11A-218ENST00000489300 HDGFL1Q5TGJ6 251 aa22.57■■□□□ 1.2
CDK11A-218ENST00000489300 AMIGO3Q86WK7 504 aa22.57■■□□□ 1.2
CDK11A-218ENST00000489300 TJP1Q07157 1748 aa22.57■■□□□ 1.2
CDK11A-218ENST00000489300 USP42Q9H9J4 1324 aaKnown RBP22.56■■□□□ 1.2
CDK11A-218ENST00000489300 E9PSI1 815 aa22.55■■□□□ 1.2
CDK11A-218ENST00000489300 SMIM5Q71RC9 77 aa22.55■■□□□ 1.2
CDK11A-218ENST00000489300 TSR2Q969E8 191 aaKnown RBP22.55■■□□□ 1.2
CDK11A-218ENST00000489300 ZNF652Q9Y2D9 606 aa22.55■■□□□ 1.2
CDK11A-218ENST00000489300 KDM3BQ7LBC6 1761 aa22.55■■□□□ 1.2
CDK11A-218ENST00000489300 COL5A3P25940 1745 aaPredicted RBP22.54■■□□□ 1.2
CDK11A-218ENST00000489300 QSER1Q2KHR3 1735 aa22.54■■□□□ 1.2
CDK11A-218ENST00000489300 KIF6Q6ZMV9 814 aa22.54■■□□□ 1.2
CDK11A-218ENST00000489300 DZIP3Q86Y13 1208 aaKnown RBP22.54■■□□□ 1.2
CDK11A-218ENST00000489300 RGL2O15211 777 aa22.53■■□□□ 1.2
CDK11A-218ENST00000489300 GYS1P13807 737 aa22.53■■□□□ 1.2
CDK11A-218ENST00000489300 MYL6BP14649 208 aa22.53■■□□□ 1.2
CDK11A-218ENST00000489300 CCDC30Q5VVM6 783 aa22.53■■□□□ 1.2
CDK11A-218ENST00000489300 USPL1Q5W0Q7 1092 aa22.53■■□□□ 1.2
CDK11A-218ENST00000489300 MSL1Q68DK7 614 aa22.53■■□□□ 1.2
CDK11A-218ENST00000489300 DBF4Q9UBU7 674 aaPredicted RBP22.53■■□□□ 1.2
CDK11A-218ENST00000489300 NBPF26B4DH59 902 aa22.52■■□□□ 1.2
CDK11A-218ENST00000489300 PTGER2P43116 358 aa22.52■■□□□ 1.2
CDK11A-218ENST00000489300 NBPF10Q6P3W6 841 aaKnown RBP22.52■■□□□ 1.2
CDK11A-218ENST00000489300 NBPF15Q8N660 670 aa22.52■■□□□ 1.2
CDK11A-218ENST00000489300 DDX21Q9NR30 783 aaKnown RBP eCLIP22.52■■□□□ 1.2
CDK11A-218ENST00000489300 ZNF521Q96K83 1311 aa22.52■■□□□ 1.2
CDK11A-218ENST00000489300 FANCIQ9NVI1 1328 aa22.52■■□□□ 1.2
CDK11A-218ENST00000489300 ELL2O00472 640 aaPredicted RBP22.51■■□□□ 1.19
CDK11A-218ENST00000489300 HNRNPUQ00839 825 aaKnown RBP eCLIP22.51■■□□□ 1.19
CDK11A-218ENST00000489300 KRT24Q2M2I5 525 aa22.51■■□□□ 1.19
CDK11A-218ENST00000489300 TWISTNBQ3B726 338 aaPredicted RBP22.51■■□□□ 1.19
CDK11A-218ENST00000489300 CLEC4GQ6UXB4 293 aa22.51■■□□□ 1.19
CDK11A-218ENST00000489300 SRP68Q9UHB9 627 aaKnown RBP22.51■■□□□ 1.19
CDK11A-218ENST00000489300 TBC1D2BQ9UPU7 963 aa22.51■■□□□ 1.19
CDK11A-218ENST00000489300 PARP3Q9Y6F1 533 aa22.51■■□□□ 1.19
CDK11A-218ENST00000489300 CASZ1Q86V15 1759 aa22.5■■□□□ 1.19
CDK11A-218ENST00000489300 PIP4K2AP48426 406 aaPredicted RBP22.5■■□□□ 1.19
CDK11A-218ENST00000489300 C8orf58Q8NAV2 365 aa22.5■■□□□ 1.19
CDK11A-218ENST00000489300 NECTIN2Q92692 538 aa22.5■■□□□ 1.19
CDK11A-218ENST00000489300 STK31Q9BXU1 1019 aa22.5■■□□□ 1.19
CDK11A-218ENST00000489300 HYPKQ9NX55 129 aa22.5■■□□□ 1.19
CDK11A-218ENST00000489300 UBR3Q6ZT12 1888 aa22.49■■□□□ 1.19
CDK11A-218ENST00000489300 SGIP1Q9BQI5 828 aa22.49■■□□□ 1.19
CDK11A-218ENST00000489300 ERVV-1B6SEH8 477 aa22.48■■□□□ 1.19
CDK11A-218ENST00000489300 MMP10P09238 476 aa22.48■■□□□ 1.19
CDK11A-218ENST00000489300 FKBP8Q14318 412 aa22.47■■□□□ 1.19
CDK11A-218ENST00000489300 CHPF2Q9P2E5 772 aa22.47■■□□□ 1.19
CDK11A-218ENST00000489300 EXOSC9Q06265 439 aaKnown RBP22.46■■□□□ 1.19
CDK11A-218ENST00000489300 SETDB2Q96T68 719 aa22.46■■□□□ 1.19
CDK11A-218ENST00000489300 CAMTA2O94983 1202 aa22.45■■□□□ 1.18
CDK11A-218ENST00000489300 SLFN5Q08AF3 891 aa22.45■■□□□ 1.18
CDK11A-218ENST00000489300 PDIA6Q15084 440 aa22.45■■□□□ 1.18
CDK11A-218ENST00000489300 MYH14Q7Z406 1995 aaKnown RBP22.45■■□□□ 1.18
CDK11A-218ENST00000489300 LRP5O75197 1615 aa22.44■■□□□ 1.18
CDK11A-218ENST00000489300 MAP3K15Q6ZN16 1313 aa22.44■■□□□ 1.18
CDK11A-218ENST00000489300 TSPYL6Q8N831 410 aa22.44■■□□□ 1.18
CDK11A-218ENST00000489300 SPINK5Q9NQ38 1064 aaPredicted RBP22.44■■□□□ 1.18
CDK11A-218ENST00000489300 DDX58O95786 925 aaKnown RBP22.43■■□□□ 1.18
CDK11A-218ENST00000489300 TM4SF1P30408 202 aa22.43■■□□□ 1.18
CDK11A-218ENST00000489300 HSP90AB3PQ58FF7 597 aa22.43■■□□□ 1.18
CDK11A-218ENST00000489300 COPS6Q7L5N1 327 aa22.43■■□□□ 1.18
CDK11A-218ENST00000489300 TUBGCP6Q96RT7 1819 aa22.43■■□□□ 1.18
CDK11A-218ENST00000489300 NPHP1O15259 732 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms