RNA–Protein interactions for RNA: ENST00000488971.1

KDM3A-213, Transcript of lysine demethylase 3A, humanhuman

TSL 3

Gene KDM3A, Length 975 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-213ENST00000488971 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.82□□□□□ -1.32
KDM3A-213ENST00000488971 BRD1O95696 1058 aa6.82□□□□□ -1.32
KDM3A-213ENST00000488971 STAU1O95793 577 aaKnown RBP6.82□□□□□ -1.32
KDM3A-213ENST00000488971 SOX11P35716 441 aa6.82□□□□□ -1.32
KDM3A-213ENST00000488971 SNRPNP63162 240 aaKnown RBP6.82□□□□□ -1.32
KDM3A-213ENST00000488971 VAC14Q08AM6 782 aa6.82□□□□□ -1.32
KDM3A-213ENST00000488971 TLR1Q15399 786 aa6.82□□□□□ -1.32
KDM3A-213ENST00000488971 RGS22Q8NE09 1264 aa6.82□□□□□ -1.32
KDM3A-213ENST00000488971 RHBDD1Q8TEB9 315 aa6.82□□□□□ -1.32
KDM3A-213ENST00000488971 EDARADDQ8WWZ3 215 aa6.82□□□□□ -1.32
KDM3A-213ENST00000488971 SIRT1Q96EB6 747 aa6.82□□□□□ -1.32
KDM3A-213ENST00000488971 SPOCK3Q9BQ16 436 aa6.82□□□□□ -1.32
KDM3A-213ENST00000488971 MKL2Q9ULH7 1088 aa6.82□□□□□ -1.32
KDM3A-213ENST00000488971 ATXN7L1Q9ULK2 861 aaPredicted RBP6.82□□□□□ -1.32
KDM3A-213ENST00000488971 SHISA8B8ZZ34 492 aa6.81□□□□□ -1.32
KDM3A-213ENST00000488971 AMPD1P23109 780 aa6.81□□□□□ -1.32
KDM3A-213ENST00000488971 PLA2G4AP47712 749 aa6.81□□□□□ -1.32
KDM3A-213ENST00000488971 KCNA1Q09470 495 aa6.81□□□□□ -1.32
KDM3A-213ENST00000488971 GOLGA6L1Q8N7Z2 621 aa6.81□□□□□ -1.32
KDM3A-213ENST00000488971 ETNK1Q9HBU6 452 aa6.81□□□□□ -1.32
KDM3A-213ENST00000488971 PALM3A6NDB9 673 aaPredicted RBP6.8□□□□□ -1.32
KDM3A-213ENST00000488971 FGFR3P22607 806 aa6.8□□□□□ -1.32
KDM3A-213ENST00000488971 RFX1P22670 979 aa6.8□□□□□ -1.32
KDM3A-213ENST00000488971 C1orf229Q6ZS94 237 aaPredicted RBP6.8□□□□□ -1.32
KDM3A-213ENST00000488971 TBC1D9Q6ZT07 1266 aa6.8□□□□□ -1.32
KDM3A-213ENST00000488971 PPARGC1BQ86YN6 1023 aaKnown RBP6.8□□□□□ -1.32
KDM3A-213ENST00000488971 PHTF2Q8N3S3 785 aa6.8□□□□□ -1.32
KDM3A-213ENST00000488971 ABHD17AQ96GS6 310 aa6.8□□□□□ -1.32
KDM3A-213ENST00000488971 MFAP1P55081 439 aaKnown RBP6.79□□□□□ -1.32
KDM3A-213ENST00000488971 UBAP2LQ14157 1087 aaKnown RBP6.79□□□□□ -1.32
KDM3A-213ENST00000488971 AIDAQ96BJ3 306 aa6.79□□□□□ -1.32
KDM3A-213ENST00000488971 UCN2Q96RP3 112 aa6.79□□□□□ -1.32
KDM3A-213ENST00000488971 ITGB2P05107 769 aa6.78□□□□□ -1.32
KDM3A-213ENST00000488971 CTBSQ01459 385 aa6.78□□□□□ -1.32
KDM3A-213ENST00000488971 FIGNL1Q6PIW4 674 aa6.78□□□□□ -1.32
KDM3A-213ENST00000488971 GGA1Q9UJY5 639 aa6.78□□□□□ -1.32
KDM3A-213ENST00000488971 KRBA1A5PL33 1030 aa6.77□□□□□ -1.33
KDM3A-213ENST00000488971 C2CD2LO14523 706 aa6.77□□□□□ -1.33
KDM3A-213ENST00000488971 BNIP3LO60238 219 aa6.77□□□□□ -1.33
KDM3A-213ENST00000488971 ADAM23O75077 832 aa6.77□□□□□ -1.33
KDM3A-213ENST00000488971 LMOD1P29536 600 aaPredicted RBP6.77□□□□□ -1.33
KDM3A-213ENST00000488971 GDF10P55107 478 aa6.77□□□□□ -1.33
KDM3A-213ENST00000488971 GRIN2CQ14957 1233 aa6.77□□□□□ -1.33
KDM3A-213ENST00000488971 NIFKQ9BYG3 293 aaKnown RBP6.77□□□□□ -1.33
KDM3A-213ENST00000488971 CRISPLD1Q9H336 500 aa6.77□□□□□ -1.33
KDM3A-213ENST00000488971 ATG7O95352 703 aa6.76□□□□□ -1.33
KDM3A-213ENST00000488971 PROCP04070 461 aa6.76□□□□□ -1.33
KDM3A-213ENST00000488971 INHAP05111 366 aa6.76□□□□□ -1.33
KDM3A-213ENST00000488971 SEMA3FQ13275 785 aa6.76□□□□□ -1.33
KDM3A-213ENST00000488971 SLCO4C1Q6ZQN7 724 aa6.76□□□□□ -1.33
KDM3A-213ENST00000488971 ALYREFQ86V81 257 aaKnown RBP6.76□□□□□ -1.33
KDM3A-213ENST00000488971 ZCCHC2Q9C0B9 1178 aaKnown RBP6.76□□□□□ -1.33
KDM3A-213ENST00000488971 TFIP11Q9UBB9 837 aaKnown RBP6.76□□□□□ -1.33
KDM3A-213ENST00000488971 MTMR7Q9Y216 660 aa6.76□□□□□ -1.33
KDM3A-213ENST00000488971 PCDHGC4Q9Y5F7 938 aa6.76□□□□□ -1.33
KDM3A-213ENST00000488971 PIK3R2O00459 728 aa6.75□□□□□ -1.33
KDM3A-213ENST00000488971 SCNN1DP51172 638 aa6.75□□□□□ -1.33
KDM3A-213ENST00000488971 MAP7D1Q3KQU3 841 aa6.75□□□□□ -1.33
KDM3A-213ENST00000488971 ARSJQ5FYB0 599 aaPredicted RBP6.75□□□□□ -1.33
KDM3A-213ENST00000488971 C1orf216Q8TAB5 229 aa6.75□□□□□ -1.33
KDM3A-213ENST00000488971 NDFIP2Q9NV92 336 aa6.75□□□□□ -1.33
KDM3A-213ENST00000488971 SERTAD1Q9UHV2 236 aa6.75□□□□□ -1.33
KDM3A-213ENST00000488971 MAFBQ9Y5Q3 323 aaPredicted RBP6.75□□□□□ -1.33
KDM3A-213ENST00000488971 TMEM88BA6NKF7 163 aa6.74□□□□□ -1.33
KDM3A-213ENST00000488971 NEURL1BA8MQ27 555 aa6.74□□□□□ -1.33
KDM3A-213ENST00000488971 ATXN7O15265 892 aaPredicted RBP6.74□□□□□ -1.33
KDM3A-213ENST00000488971 SMTNP53814 917 aa6.74□□□□□ -1.33
KDM3A-213ENST00000488971 NBPF1Q3BBV0 1214 aa6.74□□□□□ -1.33
KDM3A-213ENST00000488971 NLRP8Q86W28 1048 aa6.74□□□□□ -1.33
KDM3A-213ENST00000488971 PLPP7Q8NBV4 271 aa6.74□□□□□ -1.33
KDM3A-213ENST00000488971 BTBD6Q96KE9 485 aa6.74□□□□□ -1.33
KDM3A-213ENST00000488971 CHIC2Q9UKJ5 165 aa6.74□□□□□ -1.33
KDM3A-213ENST00000488971 DCDC2BA2VCK2 349 aa6.73□□□□□ -1.33
KDM3A-213ENST00000488971 K7ELQ4 463 aaPredicted RBP6.73□□□□□ -1.33
KDM3A-213ENST00000488971 ARAFP10398 606 aa6.73□□□□□ -1.33
KDM3A-213ENST00000488971 EPXP11678 715 aa6.73□□□□□ -1.33
KDM3A-213ENST00000488971 TATP17735 454 aaPredicted RBP6.73□□□□□ -1.33
KDM3A-213ENST00000488971 COL8A1P27658 744 aa6.73□□□□□ -1.33
KDM3A-213ENST00000488971 BAG6P46379 1132 aa6.73□□□□□ -1.33
KDM3A-213ENST00000488971 SUV39H2Q9H5I1 410 aa6.73□□□□□ -1.33
KDM3A-213ENST00000488971 GJA3Q9Y6H8 435 aa6.73□□□□□ -1.33
KDM3A-213ENST00000488971 A0A1W2PNR3 127 aa6.72□□□□□ -1.33
KDM3A-213ENST00000488971 GNB5O14775 395 aa6.72□□□□□ -1.33
KDM3A-213ENST00000488971 KHNYNO15037 678 aaKnown RBP6.72□□□□□ -1.33
KDM3A-213ENST00000488971 ATP9BO43861 1147 aa6.72□□□□□ -1.33
KDM3A-213ENST00000488971 ATP4AP20648 1035 aa6.72□□□□□ -1.33
KDM3A-213ENST00000488971 LINC00114Q6XXX2 140 aa6.72□□□□□ -1.33
KDM3A-213ENST00000488971 VRTNQ9H8Y1 702 aa6.72□□□□□ -1.33
KDM3A-213ENST00000488971 DNAAF2Q9NVR5 837 aaKnown RBP6.72□□□□□ -1.33
KDM3A-213ENST00000488971 CABP1Q9NZU7 370 aa6.72□□□□□ -1.33
KDM3A-213ENST00000488971 CARNS1A5YM72 827 aa6.71□□□□□ -1.34
KDM3A-213ENST00000488971 MAPTP10636 758 aaKnown RBP6.71□□□□□ -1.34
KDM3A-213ENST00000488971 CD33P20138 364 aa6.71□□□□□ -1.34
KDM3A-213ENST00000488971 A6NJY4 79 aa6.7□□□□□ -1.34
KDM3A-213ENST00000488971 CDK2AP1O14519 115 aa6.7□□□□□ -1.34
KDM3A-213ENST00000488971 FURINP09958 794 aa6.7□□□□□ -1.34
KDM3A-213ENST00000488971 ADH6P28332 368 aa6.7□□□□□ -1.34
KDM3A-213ENST00000488971 TNP2Q05952 138 aa6.7□□□□□ -1.34
KDM3A-213ENST00000488971 ELOAQ14241 798 aaKnown RBP6.7□□□□□ -1.34
KDM3A-213ENST00000488971 BICDL1Q6ZP65 573 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms