RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 NLGN2Q8NFZ4 835 aa18.8■□□□□ 0.6
COL9A2-208ENST00000488463 DCAF8L1A6NGE4 600 aa18.79■□□□□ 0.6
COL9A2-208ENST00000488463 RFC4P35249 363 aa18.79■□□□□ 0.6
COL9A2-208ENST00000488463 CCDC146Q8IYE0 955 aa18.79■□□□□ 0.6
COL9A2-208ENST00000488463 MIS18AQ9NYP9 233 aa18.79■□□□□ 0.6
COL9A2-208ENST00000488463 SRP68Q9UHB9 627 aaKnown RBP18.79■□□□□ 0.6
COL9A2-208ENST00000488463 KIF13BQ9NQT8 1826 aa18.79■□□□□ 0.6
COL9A2-208ENST00000488463 PRAMEF22A3QJZ6 481 aa18.78■□□□□ 0.6
COL9A2-208ENST00000488463 STARD3NLO95772 234 aa18.78■□□□□ 0.6
COL9A2-208ENST00000488463 EIF5P55010 431 aaKnown RBP18.78■□□□□ 0.6
COL9A2-208ENST00000488463 RIPK4P57078 832 aa18.78■□□□□ 0.6
COL9A2-208ENST00000488463 NLGN1Q8N2Q7 840 aa18.78■□□□□ 0.6
COL9A2-208ENST00000488463 TEX13AQ9BXU3 409 aaPredicted RBP18.78■□□□□ 0.6
COL9A2-208ENST00000488463 COL15A1P39059 1388 aa18.78■□□□□ 0.6
COL9A2-208ENST00000488463 MMP10P09238 476 aa18.77■□□□□ 0.6
COL9A2-208ENST00000488463 WDR43Q15061 677 aaKnown RBP eCLIP18.77■□□□□ 0.6
COL9A2-208ENST00000488463 RUNDC1Q96C34 613 aa18.77■□□□□ 0.6
COL9A2-208ENST00000488463 USP16Q9Y5T5 823 aa18.77■□□□□ 0.6
COL9A2-208ENST00000488463 KIAA1551Q9HCM1 1747 aa18.77■□□□□ 0.59
COL9A2-208ENST00000488463 FKBP8Q14318 412 aa18.76■□□□□ 0.59
COL9A2-208ENST00000488463 TRIM35Q9UPQ4 493 aa18.76■□□□□ 0.59
COL9A2-208ENST00000488463 CD2APQ9Y5K6 639 aa18.76■□□□□ 0.59
COL9A2-208ENST00000488463 A1BGP04217 495 aa18.75■□□□□ 0.59
COL9A2-208ENST00000488463 BCL2L12Q9HB09 334 aa18.75■□□□□ 0.59
COL9A2-208ENST00000488463 RRP7AQ9Y3A4 280 aaKnown RBP18.75■□□□□ 0.59
COL9A2-208ENST00000488463 LAMB4A4D0S4 1761 aa18.75■□□□□ 0.59
COL9A2-208ENST00000488463 CANXP27824 592 aaKnown RBP18.74■□□□□ 0.59
COL9A2-208ENST00000488463 NARFQ9UHQ1 456 aa18.74■□□□□ 0.59
COL9A2-208ENST00000488463 SCN7AQ01118 1682 aa18.73■□□□□ 0.59
COL9A2-208ENST00000488463 SNRPA1P09661 255 aaKnown RBP18.73■□□□□ 0.59
COL9A2-208ENST00000488463 TM4SF1P30408 202 aa18.73■□□□□ 0.59
COL9A2-208ENST00000488463 EIF4A1P60842 406 aaKnown RBP18.73■□□□□ 0.59
COL9A2-208ENST00000488463 DDR1Q08345 913 aa18.73■□□□□ 0.59
COL9A2-208ENST00000488463 USPL1Q5W0Q7 1092 aa18.73■□□□□ 0.59
COL9A2-208ENST00000488463 KLHL34Q8N239 644 aa18.73■□□□□ 0.59
COL9A2-208ENST00000488463 PNISRQ8TF01 805 aaKnown RBP18.73■□□□□ 0.59
COL9A2-208ENST00000488463 C10orf71Q711Q0 1435 aa18.73■□□□□ 0.59
COL9A2-208ENST00000488463 IL6STP40189 918 aaPredicted RBP18.72■□□□□ 0.59
COL9A2-208ENST00000488463 NBPF26B4DH59 902 aa18.71■□□□□ 0.59
COL9A2-208ENST00000488463 NBPF10Q6P3W6 841 aaKnown RBP18.71■□□□□ 0.59
COL9A2-208ENST00000488463 NBPF15Q8N660 670 aa18.71■□□□□ 0.59
COL9A2-208ENST00000488463 NRXN2Q9P2S2 1712 aa18.71■□□□□ 0.59
COL9A2-208ENST00000488463 BCORQ6W2J9 1755 aa18.7■□□□□ 0.58
COL9A2-208ENST00000488463 AFDNP55196 1824 aaKnown RBP18.7■□□□□ 0.58
COL9A2-208ENST00000488463 GIGYF1O75420 1035 aaPredicted RBP18.7■□□□□ 0.58
COL9A2-208ENST00000488463 LMOD3Q0VAK6 560 aa18.7■□□□□ 0.58
COL9A2-208ENST00000488463 NEUROD2Q15784 382 aa18.7■□□□□ 0.58
COL9A2-208ENST00000488463 POLRMTO00411 1230 aaKnown RBP18.69■□□□□ 0.58
COL9A2-208ENST00000488463 ZPR1O75312 459 aa18.69■□□□□ 0.58
COL9A2-208ENST00000488463 PIP4K2AP48426 406 aaPredicted RBP18.69■□□□□ 0.58
COL9A2-208ENST00000488463 ZNF784Q8NCA9 323 aaPredicted RBP18.69■□□□□ 0.58
COL9A2-208ENST00000488463 BABAM1Q9NWV8 329 aa18.69■□□□□ 0.58
COL9A2-208ENST00000488463 PXDNLA1KZ92 1463 aa18.69■□□□□ 0.58
COL9A2-208ENST00000488463 ANP32CO43423 234 aa18.68■□□□□ 0.58
COL9A2-208ENST00000488463 N4BP2Q86UW6 1770 aaPredicted RBP18.68■□□□□ 0.58
COL9A2-208ENST00000488463 A0A087WZG4 1122 aa18.67■□□□□ 0.58
COL9A2-208ENST00000488463 CHL1O00533 1208 aa18.67■□□□□ 0.58
COL9A2-208ENST00000488463 APAF1O14727 1248 aa18.67■□□□□ 0.58
COL9A2-208ENST00000488463 YBX3P16989 372 aaKnown RBP eCLIP18.67■□□□□ 0.58
COL9A2-208ENST00000488463 NFIXQ14938 502 aa18.67■□□□□ 0.58
COL9A2-208ENST00000488463 PARP3Q9Y6F1 533 aa18.67■□□□□ 0.58
COL9A2-208ENST00000488463 BRCA1P38398 1863 aaKnown RBP18.67■□□□□ 0.58
COL9A2-208ENST00000488463 CHD4Q14839 1912 aa18.66■□□□□ 0.58
COL9A2-208ENST00000488463 CAMTA2O94983 1202 aa18.66■□□□□ 0.58
COL9A2-208ENST00000488463 TSPYL4Q9UJ04 414 aa18.66■□□□□ 0.58
COL9A2-208ENST00000488463 TBC1D2BQ9UPU7 963 aa18.66■□□□□ 0.58
COL9A2-208ENST00000488463 ZNF853P0CG23 659 aa18.63■□□□□ 0.57
COL9A2-208ENST00000488463 KCNA3P22001 575 aa18.63■□□□□ 0.57
COL9A2-208ENST00000488463 TGFB2P61812 414 aa18.63■□□□□ 0.57
COL9A2-208ENST00000488463 GPR162Q16538 588 aa18.63■□□□□ 0.57
COL9A2-208ENST00000488463 TBC1D9BQ66K14 1250 aa18.63■□□□□ 0.57
COL9A2-208ENST00000488463 MRS2Q9HD23 443 aa18.63■□□□□ 0.57
COL9A2-208ENST00000488463 LRP10Q7Z4F1 713 aa18.62■□□□□ 0.57
COL9A2-208ENST00000488463 DZIP3Q86Y13 1208 aaKnown RBP18.62■□□□□ 0.57
COL9A2-208ENST00000488463 ZNF330Q9Y3S2 320 aaPredicted RBP18.62■□□□□ 0.57
COL9A2-208ENST00000488463 ANKRD31Q8N7Z5 1873 aa18.6■□□□□ 0.57
COL9A2-208ENST00000488463 A0A0G2JLW4 131 aa18.6■□□□□ 0.57
COL9A2-208ENST00000488463 RGL2O15211 777 aa18.6■□□□□ 0.57
COL9A2-208ENST00000488463 SERPINB2P05120 415 aa18.6■□□□□ 0.57
COL9A2-208ENST00000488463 PDIA6Q15084 440 aa18.6■□□□□ 0.57
COL9A2-208ENST00000488463 KRT24Q2M2I5 525 aa18.6■□□□□ 0.57
COL9A2-208ENST00000488463 CFAP44Q96MT7 982 aa18.6■□□□□ 0.57
COL9A2-208ENST00000488463 CARMIL3Q8ND23 1372 aa18.59■□□□□ 0.57
COL9A2-208ENST00000488463 DPEP1P16444 411 aa18.59■□□□□ 0.57
COL9A2-208ENST00000488463 NUP98P52948 1817 aa18.58■□□□□ 0.57
COL9A2-208ENST00000488463 ERBB4Q15303 1308 aa18.58■□□□□ 0.57
COL9A2-208ENST00000488463 CLEC4GQ6UXB4 293 aa18.58■□□□□ 0.56
COL9A2-208ENST00000488463 BICDL1Q6ZP65 573 aa18.58■□□□□ 0.56
COL9A2-208ENST00000488463 PELP1Q8IZL8 1130 aaKnown RBP18.58■□□□□ 0.56
COL9A2-208ENST00000488463 DLEC1Q9Y238 1755 aa18.58■□□□□ 0.56
COL9A2-208ENST00000488463 MBIPQ9NS73 344 aa18.57■□□□□ 0.56
COL9A2-208ENST00000488463 WWC3Q9ULE0 1092 aa18.57■□□□□ 0.56
COL9A2-208ENST00000488463 ARFGEF1Q9Y6D6 1849 aa18.56■□□□□ 0.56
COL9A2-208ENST00000488463 GRIN3BO60391 1043 aa18.56■□□□□ 0.56
COL9A2-208ENST00000488463 HLFQ16534 295 aa18.56■□□□□ 0.56
COL9A2-208ENST00000488463 CCDC27Q2M243 656 aa18.56■□□□□ 0.56
COL9A2-208ENST00000488463 PROSER3Q2NL68 480 aa18.56■□□□□ 0.56
COL9A2-208ENST00000488463 NCBP3Q53F19 620 aaKnown RBP18.56■□□□□ 0.56
COL9A2-208ENST00000488463 TTLL7Q6ZT98 887 aa18.56■□□□□ 0.56
COL9A2-208ENST00000488463 IFT57Q9NWB7 429 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms