RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 NCOA3Q9Y6Q9 1424 aa8.71□□□□□ -1.01
CDHR3-213ENST00000488386 RPGRIP1LQ68CZ1 1315 aa8.71□□□□□ -1.02
CDHR3-213ENST00000488386 ADGRL3Q9HAR2 1447 aa8.71□□□□□ -1.02
CDHR3-213ENST00000488386 LRP6O75581 1613 aa8.7□□□□□ -1.02
CDHR3-213ENST00000488386 TMEM259Q4ZIN3 620 aa8.7□□□□□ -1.02
CDHR3-213ENST00000488386 EPS8L1Q8TE68 723 aa8.7□□□□□ -1.02
CDHR3-213ENST00000488386 SNRKQ9NRH2 765 aa8.7□□□□□ -1.02
CDHR3-213ENST00000488386 EVA1BQ9NVM1 165 aa8.7□□□□□ -1.02
CDHR3-213ENST00000488386 PLEKHH1Q9ULM0 1364 aa8.7□□□□□ -1.02
CDHR3-213ENST00000488386 AHDC1Q5TGY3 1603 aaPredicted RBP8.69□□□□□ -1.02
CDHR3-213ENST00000488386 KCNH2Q12809 1159 aa8.69□□□□□ -1.02
CDHR3-213ENST00000488386 WAPLQ7Z5K2 1190 aa8.69□□□□□ -1.02
CDHR3-213ENST00000488386 PRKD2Q9BZL6 878 aa8.69□□□□□ -1.02
CDHR3-213ENST00000488386 PTCH1Q13635 1447 aa8.69□□□□□ -1.02
CDHR3-213ENST00000488386 CTHP32929 405 aa8.68□□□□□ -1.02
CDHR3-213ENST00000488386 CFAP70Q5T0N1 1121 aa8.68□□□□□ -1.02
CDHR3-213ENST00000488386 POTEAQ6S8J7 498 aa8.68□□□□□ -1.02
CDHR3-213ENST00000488386 MTMR14Q8NCE2 650 aa8.68□□□□□ -1.02
CDHR3-213ENST00000488386 ORAI2Q96SN7 254 aa8.68□□□□□ -1.02
CDHR3-213ENST00000488386 TRIM34Q9BYJ4 488 aa8.68□□□□□ -1.02
CDHR3-213ENST00000488386 UNC93B1Q9H1C4 597 aa8.68□□□□□ -1.02
CDHR3-213ENST00000488386 JCADQ9P266 1359 aa8.68□□□□□ -1.02
CDHR3-213ENST00000488386 PIK3C2GO75747 1445 aa8.68□□□□□ -1.02
CDHR3-213ENST00000488386 NHSL1Q5SYE7 1610 aa8.68□□□□□ -1.02
CDHR3-213ENST00000488386 DCCP43146 1447 aa8.67□□□□□ -1.02
CDHR3-213ENST00000488386 NR6A1Q15406 480 aa8.67□□□□□ -1.02
CDHR3-213ENST00000488386 C1orf167Q5SNV9 1468 aa8.67□□□□□ -1.02
CDHR3-213ENST00000488386 SHPRHQ149N8 1683 aa8.66□□□□□ -1.02
CDHR3-213ENST00000488386 ANKRD30BQ9BXX2 1392 aa8.66□□□□□ -1.02
CDHR3-213ENST00000488386 SLC19A1P41440 591 aa8.66□□□□□ -1.02
CDHR3-213ENST00000488386 TRIM32Q13049 653 aa8.66□□□□□ -1.02
CDHR3-213ENST00000488386 SAFB2Q14151 953 aaKnown RBP eCLIP8.66□□□□□ -1.02
CDHR3-213ENST00000488386 BANK1Q8NDB2 785 aa8.66□□□□□ -1.02
CDHR3-213ENST00000488386 GJD4Q96KN9 370 aaPredicted RBP8.66□□□□□ -1.02
CDHR3-213ENST00000488386 KNDC1Q76NI1 1749 aa8.66□□□□□ -1.02
CDHR3-213ENST00000488386 YTHDC2Q9H6S0 1430 aaKnown RBP8.65□□□□□ -1.02
CDHR3-213ENST00000488386 LRPPRCP42704 1394 aaKnown RBP8.65□□□□□ -1.02
CDHR3-213ENST00000488386 XPCQ01831 940 aaPredicted RBP8.65□□□□□ -1.02
CDHR3-213ENST00000488386 MCM6Q14566 821 aa8.65□□□□□ -1.02
CDHR3-213ENST00000488386 MEX3CQ5U5Q3 659 aaKnown RBP8.65□□□□□ -1.02
CDHR3-213ENST00000488386 MYOM2P54296 1465 aa8.64□□□□□ -1.03
CDHR3-213ENST00000488386 RGPD8O14715 1765 aaPredicted RBP8.64□□□□□ -1.03
CDHR3-213ENST00000488386 RPIAP49247 311 aa8.64□□□□□ -1.03
CDHR3-213ENST00000488386 SKOR1P84550 965 aa8.64□□□□□ -1.03
CDHR3-213ENST00000488386 LINC01559Q495D7 138 aa8.64□□□□□ -1.03
CDHR3-213ENST00000488386 SPRYD7Q5W111 196 aa8.64□□□□□ -1.03
CDHR3-213ENST00000488386 DCAF11Q8TEB1 546 aa8.64□□□□□ -1.03
CDHR3-213ENST00000488386 NRXN1Q9ULB1 1477 aa8.64□□□□□ -1.03
CDHR3-213ENST00000488386 PRAG1Q86YV5 1406 aa8.63□□□□□ -1.03
CDHR3-213ENST00000488386 GPR37L1O60883 481 aa8.63□□□□□ -1.03
CDHR3-213ENST00000488386 ESCO1Q5FWF5 840 aa8.63□□□□□ -1.03
CDHR3-213ENST00000488386 C14orf93Q9H972 538 aaKnown RBP8.63□□□□□ -1.03
CDHR3-213ENST00000488386 V9GY48 417 aaPredicted RBP8.63□□□□□ -1.03
CDHR3-213ENST00000488386 CDC42BPGQ6DT37 1551 aa8.63□□□□□ -1.03
CDHR3-213ENST00000488386 TECPR2O15040 1411 aa8.63□□□□□ -1.03
CDHR3-213ENST00000488386 DHX57Q6P158 1386 aaKnown RBP8.62□□□□□ -1.03
CDHR3-213ENST00000488386 PNPLA6Q8IY17 1366 aa8.62□□□□□ -1.03
CDHR3-213ENST00000488386 ZBTB24O43167 697 aaPredicted RBP8.62□□□□□ -1.03
CDHR3-213ENST00000488386 BAP1Q92560 729 aa8.62□□□□□ -1.03
CDHR3-213ENST00000488386 TRAK1Q9UPV9 953 aa8.62□□□□□ -1.03
CDHR3-213ENST00000488386 FMN2Q9NZ56 1722 aa8.62□□□□□ -1.03
CDHR3-213ENST00000488386 LAMC1P11047 1609 aa8.62□□□□□ -1.03
CDHR3-213ENST00000488386 ABCC11Q96J66 1382 aa8.61□□□□□ -1.03
CDHR3-213ENST00000488386 SPATA31A6Q5VVP1 1343 aa8.61□□□□□ -1.03
CDHR3-213ENST00000488386 FOXO3O43524 673 aa8.61□□□□□ -1.03
CDHR3-213ENST00000488386 ADAMTS2O95450 1211 aa8.61□□□□□ -1.03
CDHR3-213ENST00000488386 ZNF697Q5TEC3 545 aa8.61□□□□□ -1.03
CDHR3-213ENST00000488386 C8orf37Q96NL8 207 aa8.61□□□□□ -1.03
CDHR3-213ENST00000488386 PRAM1Q96QH2 718 aa8.61□□□□□ -1.03
CDHR3-213ENST00000488386 HIRIP3Q9BW71 556 aaPredicted RBP8.61□□□□□ -1.03
CDHR3-213ENST00000488386 ADGRB1O14514 1584 aa8.61□□□□□ -1.03
CDHR3-213ENST00000488386 RGS20O76081 388 aa8.6□□□□□ -1.03
CDHR3-213ENST00000488386 SH3BP2P78314 561 aa8.6□□□□□ -1.03
CDHR3-213ENST00000488386 LRRC59Q96AG4 307 aaKnown RBP8.6□□□□□ -1.03
CDHR3-213ENST00000488386 AFF2P51816 1311 aa8.59□□□□□ -1.03
CDHR3-213ENST00000488386 SOS2Q07890 1332 aaPredicted RBP8.59□□□□□ -1.03
CDHR3-213ENST00000488386 TRIM67Q6ZTA4 783 aa8.59□□□□□ -1.03
CDHR3-213ENST00000488386 ZNF598Q86UK7 904 aaKnown RBP8.59□□□□□ -1.03
CDHR3-213ENST00000488386 ZNF511Q8NB15 262 aa8.59□□□□□ -1.03
CDHR3-213ENST00000488386 FKBPLQ9UIM3 349 aa8.59□□□□□ -1.03
CDHR3-213ENST00000488386 USP32Q8NFA0 1604 aa8.58□□□□□ -1.04
CDHR3-213ENST00000488386 PXDNQ92626 1479 aa8.58□□□□□ -1.04
CDHR3-213ENST00000488386 ACIN1Q9UKV3 1341 aaKnown RBP8.58□□□□□ -1.04
CDHR3-213ENST00000488386 C4orf48Q5BLP8 95 aa8.58□□□□□ -1.04
CDHR3-213ENST00000488386 FOXJ1Q92949 421 aa8.58□□□□□ -1.04
CDHR3-213ENST00000488386 SIN3AQ96ST3 1273 aa8.58□□□□□ -1.04
CDHR3-213ENST00000488386 PKD2L1Q9P0L9 805 aa8.58□□□□□ -1.04
CDHR3-213ENST00000488386 POGKQ9P215 609 aa8.58□□□□□ -1.04
CDHR3-213ENST00000488386 TBC1D2BQ9UPU7 963 aa8.58□□□□□ -1.04
CDHR3-213ENST00000488386 ARHGEF28Q8N1W1 1705 aaKnown RBP8.57□□□□□ -1.04
CDHR3-213ENST00000488386 CD2BP2O95400 341 aaKnown RBP8.57□□□□□ -1.04
CDHR3-213ENST00000488386 PMFBP1Q8TBY8 1022 aa8.57□□□□□ -1.04
CDHR3-213ENST00000488386 POM121Q96HA1 1249 aa8.57□□□□□ -1.04
CDHR3-213ENST00000488386 NPHP3Q7Z494 1330 aa8.56□□□□□ -1.04
CDHR3-213ENST00000488386 DLC1Q96QB1 1528 aa8.56□□□□□ -1.04
CDHR3-213ENST00000488386 COL22A1Q8NFW1 1626 aaPredicted RBP8.56□□□□□ -1.04
CDHR3-213ENST00000488386 WNT7BP56706 349 aa8.56□□□□□ -1.04
CDHR3-213ENST00000488386 NBPF1Q3BBV0 1214 aa8.56□□□□□ -1.04
CDHR3-213ENST00000488386 ZNF772Q68DY9 489 aaPredicted RBP8.56□□□□□ -1.04
CDHR3-213ENST00000488386 OCSTAMPQ9BR26 566 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms