RNA–Protein interactions for RNA: ENST00000488149.5

MCF2L2-212, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 2

Gene MCF2L2, Length 7,813 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-212ENST00000488149 ZNF830Q96NB3 372 aaPredicted RBP9.58□□□□□ -0.88
MCF2L2-212ENST00000488149 GCOM1H8Y6P7 765 aaPredicted RBP9.58□□□□□ -0.88
MCF2L2-212ENST00000488149 MYZAPP0CAP1 466 aa9.58□□□□□ -0.88
MCF2L2-212ENST00000488149 CNNM3Q8NE01 707 aa9.58□□□□□ -0.88
MCF2L2-212ENST00000488149 HECW1Q76N89 1606 aa9.58□□□□□ -0.88
MCF2L2-212ENST00000488149 SKILP12757 684 aa9.57□□□□□ -0.88
MCF2L2-212ENST00000488149 GIMAP6Q6P9H5 292 aa9.57□□□□□ -0.88
MCF2L2-212ENST00000488149 CABP1Q9NZU7 370 aa9.57□□□□□ -0.88
MCF2L2-212ENST00000488149 CDK19Q9BWU1 502 aa9.57□□□□□ -0.88
MCF2L2-212ENST00000488149 PHAXQ9H814 394 aaKnown RBP9.57□□□□□ -0.88
MCF2L2-212ENST00000488149 CCDC12Q8WUD4 166 aaPredicted RBP9.57□□□□□ -0.88
MCF2L2-212ENST00000488149 OGFRQ9NZT2 677 aa9.57□□□□□ -0.88
MCF2L2-212ENST00000488149 CEP126Q9P2H0 1117 aa9.57□□□□□ -0.88
MCF2L2-212ENST00000488149 KIF20AO95235 890 aa9.57□□□□□ -0.88
MCF2L2-212ENST00000488149 ZSCAN22P10073 491 aaPredicted RBP9.57□□□□□ -0.88
MCF2L2-212ENST00000488149 CCDC113Q9H0I3 377 aa9.57□□□□□ -0.88
MCF2L2-212ENST00000488149 IRX3P78415 501 aaPredicted RBP9.57□□□□□ -0.88
MCF2L2-212ENST00000488149 RAB3GAP1Q15042 981 aa9.57□□□□□ -0.88
MCF2L2-212ENST00000488149 TTC22Q5TAA0 569 aa9.57□□□□□ -0.88
MCF2L2-212ENST00000488149 SEPT11Q9NVA2 429 aaKnown RBP9.57□□□□□ -0.88
MCF2L2-212ENST00000488149 TFIP11Q9UBB9 837 aaKnown RBP9.57□□□□□ -0.88
MCF2L2-212ENST00000488149 PRIM1P49642 420 aaKnown RBP9.56□□□□□ -0.88
MCF2L2-212ENST00000488149 SPECC1LQ69YQ0 1117 aa9.56□□□□□ -0.88
MCF2L2-212ENST00000488149 CCDC186Q7Z3E2 898 aa9.56□□□□□ -0.88
MCF2L2-212ENST00000488149 VPS36Q86VN1 386 aa9.56□□□□□ -0.88
MCF2L2-212ENST00000488149 TMX3Q96JJ7 454 aa9.56□□□□□ -0.88
MCF2L2-212ENST00000488149 TUBB4BP68371 445 aa9.56□□□□□ -0.88
MCF2L2-212ENST00000488149 SPECC1Q5M775 1068 aa9.56□□□□□ -0.88
MCF2L2-212ENST00000488149 ABTB2Q8N961 1025 aa9.56□□□□□ -0.88
MCF2L2-212ENST00000488149 EHBP1Q8NDI1 1231 aa9.56□□□□□ -0.88
MCF2L2-212ENST00000488149 ALS2CR12Q96Q35 445 aa9.56□□□□□ -0.88
MCF2L2-212ENST00000488149 ZSCAN16Q9H4T2 348 aaPredicted RBP9.56□□□□□ -0.88
MCF2L2-212ENST00000488149 CCDC196A0A1B0GTZ2 297 aa9.56□□□□□ -0.88
MCF2L2-212ENST00000488149 FGFR1OPO95684 399 aaKnown RBP9.56□□□□□ -0.88
MCF2L2-212ENST00000488149 NUCB1Q02818 461 aa9.56□□□□□ -0.88
MCF2L2-212ENST00000488149 GIGYF2Q6Y7W6 1299 aaKnown RBP9.56□□□□□ -0.88
MCF2L2-212ENST00000488149 CACNA2D4Q7Z3S7 1137 aa9.56□□□□□ -0.88
MCF2L2-212ENST00000488149 NF2P35240 595 aa9.56□□□□□ -0.88
MCF2L2-212ENST00000488149 NUTM2GQ5VZR2 741 aa9.56□□□□□ -0.88
MCF2L2-212ENST00000488149 TTC12Q9H892 705 aaPredicted RBP9.56□□□□□ -0.88
MCF2L2-212ENST00000488149 TDO2P48775 406 aa9.56□□□□□ -0.88
MCF2L2-212ENST00000488149 SMC5Q8IY18 1101 aa9.56□□□□□ -0.88
MCF2L2-212ENST00000488149 BCCIPQ9P287 314 aaKnown RBP eCLIP9.55□□□□□ -0.88
MCF2L2-212ENST00000488149 CETN2P41208 172 aa9.55□□□□□ -0.88
MCF2L2-212ENST00000488149 CPLX3Q8WVH0 158 aa9.55□□□□□ -0.88
MCF2L2-212ENST00000488149 PTPRCP08575 1304 aa9.55□□□□□ -0.88
MCF2L2-212ENST00000488149 TERF1P54274 439 aa9.55□□□□□ -0.88
MCF2L2-212ENST00000488149 RSPH14Q9UHP6 348 aa9.55□□□□□ -0.88
MCF2L2-212ENST00000488149 CKAP4Q07065 602 aaKnown RBP9.55□□□□□ -0.88
MCF2L2-212ENST00000488149 HLTFQ14527 1009 aaKnown RBP eCLIP9.55□□□□□ -0.88
MCF2L2-212ENST00000488149 SSBP05455 408 aaKnown RBP eCLIP9.55□□□□□ -0.88
MCF2L2-212ENST00000488149 HSPA4P34932 840 aa9.55□□□□□ -0.88
MCF2L2-212ENST00000488149 ANO6Q4KMQ2 910 aa9.55□□□□□ -0.88
MCF2L2-212ENST00000488149 TMX1Q9H3N1 280 aa9.55□□□□□ -0.88
MCF2L2-212ENST00000488149 NCAPD3P42695 1498 aa9.55□□□□□ -0.88
MCF2L2-212ENST00000488149 ANAPC15P60006 121 aa9.54□□□□□ -0.88
MCF2L2-212ENST00000488149 CCDC178Q5BJE1 867 aa9.54□□□□□ -0.88
MCF2L2-212ENST00000488149 DNAI1Q9UI46 699 aa9.54□□□□□ -0.88
MCF2L2-212ENST00000488149 USP48Q86UV5 1035 aa9.54□□□□□ -0.88
MCF2L2-212ENST00000488149 BIN1O00499 593 aa9.54□□□□□ -0.88
MCF2L2-212ENST00000488149 PPP1R12BO60237 982 aaPredicted RBP9.54□□□□□ -0.88
MCF2L2-212ENST00000488149 SAMD1Q6SPF0 538 aaPredicted RBP9.54□□□□□ -0.88
MCF2L2-212ENST00000488149 HSF2BPO75031 334 aa9.54□□□□□ -0.88
MCF2L2-212ENST00000488149 CAPN2P17655 700 aa9.54□□□□□ -0.88
MCF2L2-212ENST00000488149 MCM6Q14566 821 aa9.54□□□□□ -0.88
MCF2L2-212ENST00000488149 KANK3Q6NY19 840 aa9.54□□□□□ -0.88
MCF2L2-212ENST00000488149 ZNF530Q6P9A1 599 aaPredicted RBP9.54□□□□□ -0.88
MCF2L2-212ENST00000488149 GUCY1B3Q02153 619 aa9.54□□□□□ -0.88
MCF2L2-212ENST00000488149 TAOK3Q9H2K8 898 aa9.54□□□□□ -0.88
MCF2L2-212ENST00000488149 TROQ12816 1431 aaPredicted RBP9.54□□□□□ -0.88
MCF2L2-212ENST00000488149 TSG101Q99816 390 aa9.54□□□□□ -0.88
MCF2L2-212ENST00000488149 ZSWIM4Q9H7M6 989 aa9.54□□□□□ -0.88
MCF2L2-212ENST00000488149 RRAGDQ9NQL2 400 aaPredicted RBP9.54□□□□□ -0.88
MCF2L2-212ENST00000488149 SYNJ2O15056 1496 aa9.54□□□□□ -0.88
MCF2L2-212ENST00000488149 TTC31Q49AM3 519 aaPredicted RBP9.54□□□□□ -0.88
MCF2L2-212ENST00000488149 EVI5LQ96CN4 794 aa9.54□□□□□ -0.88
MCF2L2-212ENST00000488149 BOLA2Q9H3K6 86 aa9.54□□□□□ -0.88
MCF2L2-212ENST00000488149 RPGRIP1LQ68CZ1 1315 aa9.53□□□□□ -0.88
MCF2L2-212ENST00000488149 CEP112Q8N8E3 955 aa9.53□□□□□ -0.88
MCF2L2-212ENST00000488149 CTAGE15A4D2H0 777 aa9.53□□□□□ -0.88
MCF2L2-212ENST00000488149 CTAGE8P0CG41 777 aa9.53□□□□□ -0.88
MCF2L2-212ENST00000488149 UBASH3AP57075 661 aa9.53□□□□□ -0.88
MCF2L2-212ENST00000488149 CTAGE6Q86UF2 777 aa9.53□□□□□ -0.88
MCF2L2-212ENST00000488149 CTAGE4Q8IX94 777 aa9.53□□□□□ -0.88
MCF2L2-212ENST00000488149 TOP2BQ02880 1626 aa9.53□□□□□ -0.88
MCF2L2-212ENST00000488149 DDX54Q8TDD1 881 aaKnown RBP9.53□□□□□ -0.88
MCF2L2-212ENST00000488149 GOPCQ9HD26 462 aa9.53□□□□□ -0.88
MCF2L2-212ENST00000488149 HMG20BQ9P0W2 317 aa9.53□□□□□ -0.88
MCF2L2-212ENST00000488149 V9GYY5 206 aaPredicted RBP9.53□□□□□ -0.88
MCF2L2-212ENST00000488149 MAATS1Q7Z4T9 603 aa9.53□□□□□ -0.88
MCF2L2-212ENST00000488149 THUMPD2Q9BTF0 503 aaKnown RBP9.53□□□□□ -0.88
MCF2L2-212ENST00000488149 RASSF4Q9H2L5 321 aa9.53□□□□□ -0.88
MCF2L2-212ENST00000488149 CCDC102BQ68D86 513 aa9.53□□□□□ -0.88
MCF2L2-212ENST00000488149 GOLGA1Q92805 767 aa9.53□□□□□ -0.88
MCF2L2-212ENST00000488149 AIDAQ96BJ3 306 aa9.53□□□□□ -0.88
MCF2L2-212ENST00000488149 ZFP91Q96JP5 570 aaPredicted RBP9.53□□□□□ -0.88
MCF2L2-212ENST00000488149 IL16Q14005 1332 aa9.53□□□□□ -0.88
MCF2L2-212ENST00000488149 CCDC141Q6ZP82 1450 aa9.52□□□□□ -0.88
MCF2L2-212ENST00000488149 TUBBP07437 444 aa9.52□□□□□ -0.88
MCF2L2-212ENST00000488149 JADE2Q9NQC1 790 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms