RNA–Protein interactions for RNA: ENST00000488016.1

NECTIN3-209, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 3

Gene NECTIN3, Length 829 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-209ENST00000488016 MYOM1P52179 1685 aa10.89□□□□□ -0.67
NECTIN3-209ENST00000488016 TTC21BQ7Z4L5 1316 aa10.88□□□□□ -0.67
NECTIN3-209ENST00000488016 C11orf95C9JLR9 678 aaPredicted RBP10.88□□□□□ -0.67
NECTIN3-209ENST00000488016 TMF1P82094 1093 aa10.88□□□□□ -0.67
NECTIN3-209ENST00000488016 MAP2K5Q13163 448 aa10.88□□□□□ -0.67
NECTIN3-209ENST00000488016 RDH13Q8NBN7 331 aa10.88□□□□□ -0.67
NECTIN3-209ENST00000488016 IRX2Q9BZI1 471 aaPredicted RBP10.88□□□□□ -0.67
NECTIN3-209ENST00000488016 PLCH1Q4KWH8 1693 aa10.88□□□□□ -0.67
NECTIN3-209ENST00000488016 ZC3H6P61129 1189 aaKnown RBP10.87□□□□□ -0.67
NECTIN3-209ENST00000488016 EIF4G2P78344 907 aaKnown RBP eCLIP10.87□□□□□ -0.67
NECTIN3-209ENST00000488016 CHRNA2Q15822 529 aa10.87□□□□□ -0.67
NECTIN3-209ENST00000488016 PPP1R18Q6NYC8 613 aa10.87□□□□□ -0.67
NECTIN3-209ENST00000488016 NME9Q86XW9 330 aa10.87□□□□□ -0.67
NECTIN3-209ENST00000488016 NKX2-3Q8TAU0 364 aa10.87□□□□□ -0.67
NECTIN3-209ENST00000488016 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.87□□□□□ -0.67
NECTIN3-209ENST00000488016 USP21Q9UK80 565 aa10.87□□□□□ -0.67
NECTIN3-209ENST00000488016 BCL9LQ86UU0 1499 aa10.87□□□□□ -0.67
NECTIN3-209ENST00000488016 EP400Q96L91 3159 aa10.86□□□□□ -0.67
NECTIN3-209ENST00000488016 ZBTB7CA1YPR0 619 aa10.86□□□□□ -0.67
NECTIN3-209ENST00000488016 FAM83GA6ND36 823 aa10.86□□□□□ -0.67
NECTIN3-209ENST00000488016 SULF1Q8IWU6 871 aa10.86□□□□□ -0.67
NECTIN3-209ENST00000488016 NLRP7Q8WX94 980 aa10.86□□□□□ -0.67
NECTIN3-209ENST00000488016 KIAA0232Q92628 1395 aa10.86□□□□□ -0.67
NECTIN3-209ENST00000488016 SLIT2O94813 1529 aa10.85□□□□□ -0.67
NECTIN3-209ENST00000488016 DDX11L8A8MPP1 907 aa10.85□□□□□ -0.67
NECTIN3-209ENST00000488016 FNBP4Q8N3X1 1017 aaPredicted RBP10.85□□□□□ -0.67
NECTIN3-209ENST00000488016 USP19O94966 1318 aa10.84□□□□□ -0.67
NECTIN3-209ENST00000488016 NRAPQ86VF7 1730 aa10.84□□□□□ -0.67
NECTIN3-209ENST00000488016 NR1I2O75469 434 aa10.84□□□□□ -0.67
NECTIN3-209ENST00000488016 SLIT3O75094 1523 aa10.84□□□□□ -0.67
NECTIN3-209ENST00000488016 FBLN1P23142 703 aa10.83□□□□□ -0.68
NECTIN3-209ENST00000488016 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.83□□□□□ -0.68
NECTIN3-209ENST00000488016 HDGFL2Q7Z4V5 671 aaPredicted RBP10.83□□□□□ -0.68
NECTIN3-209ENST00000488016 PHOX2BQ99453 314 aa10.83□□□□□ -0.68
NECTIN3-209ENST00000488016 PRDM11Q9NQV5 511 aa10.83□□□□□ -0.68
NECTIN3-209ENST00000488016 BTG4Q9NY30 223 aa10.83□□□□□ -0.68
NECTIN3-209ENST00000488016 ATRNO75882 1429 aa10.83□□□□□ -0.68
NECTIN3-209ENST00000488016 GLI3P10071 1580 aa10.82□□□□□ -0.68
NECTIN3-209ENST00000488016 GCP02774 474 aa10.82□□□□□ -0.68
NECTIN3-209ENST00000488016 NLRP13Q86W25 1043 aa10.82□□□□□ -0.68
NECTIN3-209ENST00000488016 COL14A1Q05707 1796 aaKnown RBP10.82□□□□□ -0.68
NECTIN3-209ENST00000488016 EDC4Q6P2E9 1401 aaKnown RBP10.82□□□□□ -0.68
NECTIN3-209ENST00000488016 ANKRD36BQ8N2N9 1353 aa10.81□□□□□ -0.68
NECTIN3-209ENST00000488016 NFAT5O94916 1531 aa10.81□□□□□ -0.68
NECTIN3-209ENST00000488016 IRF6O14896 467 aa10.81□□□□□ -0.68
NECTIN3-209ENST00000488016 UNC5CLQ8IV45 518 aa10.81□□□□□ -0.68
NECTIN3-209ENST00000488016 PUS7Q96PZ0 661 aaKnown RBP10.81□□□□□ -0.68
NECTIN3-209ENST00000488016 TMUB1Q9BVT8 246 aa10.81□□□□□ -0.68
NECTIN3-209ENST00000488016 CARD14Q9BXL6 1004 aa10.81□□□□□ -0.68
NECTIN3-209ENST00000488016 PRKD2Q9BZL6 878 aa10.81□□□□□ -0.68
NECTIN3-209ENST00000488016 TERF2IPQ9NYB0 399 aa10.81□□□□□ -0.68
NECTIN3-209ENST00000488016 NSD3Q9BZ95 1437 aa10.81□□□□□ -0.68
NECTIN3-209ENST00000488016 TTC21AQ8NDW8 1320 aa10.81□□□□□ -0.68
NECTIN3-209ENST00000488016 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.81□□□□□ -0.68
NECTIN3-209ENST00000488016 LMO7Q8WWI1 1683 aa10.8□□□□□ -0.68
NECTIN3-209ENST00000488016 CAMTA1Q9Y6Y1 1673 aa10.8□□□□□ -0.68
NECTIN3-209ENST00000488016 TLL1O43897 1013 aa10.8□□□□□ -0.68
NECTIN3-209ENST00000488016 GGNBP2Q9H3C7 697 aa10.8□□□□□ -0.68
NECTIN3-209ENST00000488016 STRN4Q9NRL3 753 aa10.8□□□□□ -0.68
NECTIN3-209ENST00000488016 TRPC5Q9UL62 973 aaPredicted RBP10.8□□□□□ -0.68
NECTIN3-209ENST00000488016 OVOS2A0A0J9YW53 1432 aa10.8□□□□□ -0.68
NECTIN3-209ENST00000488016 OVOS2Q6IE36 1432 aa10.8□□□□□ -0.68
NECTIN3-209ENST00000488016 NWD2Q9ULI1 1742 aa10.8□□□□□ -0.68
NECTIN3-209ENST00000488016 KIF7Q2M1P5 1343 aa10.8□□□□□ -0.68
NECTIN3-209ENST00000488016 BRD4O60885 1362 aaPredicted RBP10.79□□□□□ -0.68
NECTIN3-209ENST00000488016 NINLQ9Y2I6 1382 aa10.79□□□□□ -0.68
NECTIN3-209ENST00000488016 DEFB132Q7Z7B7 95 aa10.79□□□□□ -0.68
NECTIN3-209ENST00000488016 CCDC9Q9Y3X0 531 aaKnown RBP10.79□□□□□ -0.68
NECTIN3-209ENST00000488016 USP54Q70EL1 1684 aa10.79□□□□□ -0.68
NECTIN3-209ENST00000488016 USP31Q70CQ4 1352 aa10.78□□□□□ -0.68
NECTIN3-209ENST00000488016 COL18A1P39060 1754 aa10.78□□□□□ -0.68
NECTIN3-209ENST00000488016 PUS10Q3MIT2 529 aaKnown RBP10.78□□□□□ -0.68
NECTIN3-209ENST00000488016 RGPD5Q99666 1765 aa10.77□□□□□ -0.68
NECTIN3-209ENST00000488016 KIF20BQ96Q89 1820 aa10.77□□□□□ -0.68
NECTIN3-209ENST00000488016 ADH1BP00325 375 aa10.77□□□□□ -0.69
NECTIN3-209ENST00000488016 CDCA8Q53HL2 280 aa10.77□□□□□ -0.69
NECTIN3-209ENST00000488016 LARP1Q6PKG0 1096 aaKnown RBP10.77□□□□□ -0.69
NECTIN3-209ENST00000488016 CCDC102AQ96A19 550 aa10.77□□□□□ -0.69
NECTIN3-209ENST00000488016 GJD4Q96KN9 370 aaPredicted RBP10.77□□□□□ -0.69
NECTIN3-209ENST00000488016 USP35Q9P2H5 1018 aa10.77□□□□□ -0.69
NECTIN3-209ENST00000488016 V9GY48 417 aaPredicted RBP10.77□□□□□ -0.69
NECTIN3-209ENST00000488016 CPDO75976 1380 aa10.77□□□□□ -0.69
NECTIN3-209ENST00000488016 COL5A2P05997 1499 aaPredicted RBP10.76□□□□□ -0.69
NECTIN3-209ENST00000488016 LTN1O94822 1766 aa10.76□□□□□ -0.69
NECTIN3-209ENST00000488016 FYB1O15117 783 aa10.76□□□□□ -0.69
NECTIN3-209ENST00000488016 VPS72Q15906 364 aa10.76□□□□□ -0.69
NECTIN3-209ENST00000488016 ARHGEF25Q86VW2 580 aa10.76□□□□□ -0.69
NECTIN3-209ENST00000488016 CCDC125Q86Z20 511 aa10.76□□□□□ -0.69
NECTIN3-209ENST00000488016 PANK3Q9H999 370 aa10.76□□□□□ -0.69
NECTIN3-209ENST00000488016 WASHC2AQ641Q2 1341 aa10.76□□□□□ -0.69
NECTIN3-209ENST00000488016 SLC24A1O60721 1099 aa10.75□□□□□ -0.69
NECTIN3-209ENST00000488016 ATP6V1AP38606 617 aa10.75□□□□□ -0.69
NECTIN3-209ENST00000488016 GCGRP47871 477 aa10.75□□□□□ -0.69
NECTIN3-209ENST00000488016 MDM2Q00987 491 aaPredicted RBP10.75□□□□□ -0.69
NECTIN3-209ENST00000488016 FUT2Q10981 343 aa10.75□□□□□ -0.69
NECTIN3-209ENST00000488016 RRS1Q15050 365 aaKnown RBP10.75□□□□□ -0.69
NECTIN3-209ENST00000488016 SCUBE3Q8IX30 993 aa10.75□□□□□ -0.69
NECTIN3-209ENST00000488016 CNGB1Q14028 1251 aaPredicted RBP10.74□□□□□ -0.69
NECTIN3-209ENST00000488016 COG3Q96JB2 828 aa10.74□□□□□ -0.69
NECTIN3-209ENST00000488016 SPATA31A5Q5VU36 1347 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms