RNA–Protein interactions for RNA: ENST00000487699.1

SATB1-215, Transcript of SATB homeobox 1, humanhuman

TSL 4

Gene SATB1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-215ENST00000487699 TRAPPC3LQ5T215 181 aa12.8□□□□□ -0.36
SATB1-215ENST00000487699 TTC5Q8N0Z6 440 aa12.8□□□□□ -0.36
SATB1-215ENST00000487699 KDM3BQ7LBC6 1761 aa12.79□□□□□ -0.36
SATB1-215ENST00000487699 CHL1O00533 1208 aa12.79□□□□□ -0.36
SATB1-215ENST00000487699 A1BGP04217 495 aa12.79□□□□□ -0.36
SATB1-215ENST00000487699 ZNF853P0CG23 659 aa12.79□□□□□ -0.36
SATB1-215ENST00000487699 GYS1P13807 737 aa12.79□□□□□ -0.36
SATB1-215ENST00000487699 ADRA2BP18089 450 aa12.79□□□□□ -0.36
SATB1-215ENST00000487699 SRP68Q9UHB9 627 aaKnown RBP12.79□□□□□ -0.36
SATB1-215ENST00000487699 MSH5O43196 834 aa12.78□□□□□ -0.36
SATB1-215ENST00000487699 GIGYF1O75420 1035 aaPredicted RBP12.78□□□□□ -0.36
SATB1-215ENST00000487699 SNRPA1P09661 255 aaKnown RBP12.78□□□□□ -0.36
SATB1-215ENST00000487699 ARXQ96QS3 562 aa12.78□□□□□ -0.36
SATB1-215ENST00000487699 TEX13AQ9BXU3 409 aaPredicted RBP12.78□□□□□ -0.36
SATB1-215ENST00000487699 BCL2L12Q9HB09 334 aa12.78□□□□□ -0.36
SATB1-215ENST00000487699 BABAM1Q9NWV8 329 aa12.78□□□□□ -0.36
SATB1-215ENST00000487699 SENP3-EIF4A1A0A087X0R7 540 aa12.77□□□□□ -0.37
SATB1-215ENST00000487699 NBPF26B4DH59 902 aa12.77□□□□□ -0.37
SATB1-215ENST00000487699 NBPF10Q6P3W6 841 aaKnown RBP12.77□□□□□ -0.37
SATB1-215ENST00000487699 NBPF15Q8N660 670 aa12.77□□□□□ -0.37
SATB1-215ENST00000487699 FHDC1Q9C0D6 1143 aaPredicted RBP12.77□□□□□ -0.37
SATB1-215ENST00000487699 USP42Q9H9J4 1324 aaKnown RBP12.77□□□□□ -0.37
SATB1-215ENST00000487699 C4AP0C0L4 1744 aa12.76□□□□□ -0.37
SATB1-215ENST00000487699 STARD3NLO95772 234 aa12.76□□□□□ -0.37
SATB1-215ENST00000487699 CANXP27824 592 aaKnown RBP12.76□□□□□ -0.37
SATB1-215ENST00000487699 PIP4K2AP48426 406 aaPredicted RBP12.76□□□□□ -0.37
SATB1-215ENST00000487699 LMOD3Q0VAK6 560 aa12.76□□□□□ -0.37
SATB1-215ENST00000487699 KRT24Q2M2I5 525 aa12.76□□□□□ -0.37
SATB1-215ENST00000487699 SYT17Q9BSW7 474 aa12.76□□□□□ -0.37
SATB1-215ENST00000487699 TM4SF1P30408 202 aa12.75□□□□□ -0.37
SATB1-215ENST00000487699 COL15A1P39059 1388 aa12.75□□□□□ -0.37
SATB1-215ENST00000487699 FKBP8Q14318 412 aa12.75□□□□□ -0.37
SATB1-215ENST00000487699 NCBP3Q53F19 620 aaKnown RBP12.75□□□□□ -0.37
SATB1-215ENST00000487699 LRP10Q7Z4F1 713 aa12.75□□□□□ -0.37
SATB1-215ENST00000487699 TSPYL4Q9UJ04 414 aa12.75□□□□□ -0.37
SATB1-215ENST00000487699 RFC4P35249 363 aa12.74□□□□□ -0.37
SATB1-215ENST00000487699 IL6STP40189 918 aaPredicted RBP12.74□□□□□ -0.37
SATB1-215ENST00000487699 PDIA6Q15084 440 aa12.74□□□□□ -0.37
SATB1-215ENST00000487699 CCDC27Q2M243 656 aa12.74□□□□□ -0.37
SATB1-215ENST00000487699 USPL1Q5W0Q7 1092 aa12.74□□□□□ -0.37
SATB1-215ENST00000487699 CFAP44Q96MT7 982 aa12.74□□□□□ -0.37
SATB1-215ENST00000487699 NARFQ9UHQ1 456 aa12.74□□□□□ -0.37
SATB1-215ENST00000487699 UTRNP46939 3433 aa12.73□□□□□ -0.37
SATB1-215ENST00000487699 MMP10P09238 476 aa12.73□□□□□ -0.37
SATB1-215ENST00000487699 POLD1P28340 1107 aa12.73□□□□□ -0.37
SATB1-215ENST00000487699 DDR1Q08345 913 aa12.73□□□□□ -0.37
SATB1-215ENST00000487699 WWC1Q8IX03 1113 aa12.73□□□□□ -0.37
SATB1-215ENST00000487699 NLGN1Q8N2Q7 840 aa12.73□□□□□ -0.37
SATB1-215ENST00000487699 MBIPQ9NS73 344 aa12.73□□□□□ -0.37
SATB1-215ENST00000487699 PPP1R1BQ9UD71 204 aaPredicted RBP12.73□□□□□ -0.37
SATB1-215ENST00000487699 CAMTA2O94983 1202 aa12.72□□□□□ -0.37
SATB1-215ENST00000487699 FAM9BQ8IZU0 186 aa12.72□□□□□ -0.37
SATB1-215ENST00000487699 NLGN2Q8NFZ4 835 aa12.72□□□□□ -0.37
SATB1-215ENST00000487699 GOLGB1Q14789 3259 aaKnown RBP12.71□□□□□ -0.37
SATB1-215ENST00000487699 CCER2I3L3R5 266 aa12.71□□□□□ -0.37
SATB1-215ENST00000487699 POLRMTO00411 1230 aaKnown RBP12.71□□□□□ -0.37
SATB1-215ENST00000487699 IFT57Q9NWB7 429 aa12.71□□□□□ -0.37
SATB1-215ENST00000487699 TBC1D2BQ9UPU7 963 aa12.71□□□□□ -0.37
SATB1-215ENST00000487699 NFIXQ14938 502 aa12.7□□□□□ -0.38
SATB1-215ENST00000487699 PROSER3Q2NL68 480 aa12.7□□□□□ -0.38
SATB1-215ENST00000487699 LAS1LQ9Y4W2 734 aaKnown RBP12.7□□□□□ -0.38
SATB1-215ENST00000487699 ZPR1O75312 459 aa12.69□□□□□ -0.38
SATB1-215ENST00000487699 MIER1Q8N108 512 aa12.69□□□□□ -0.38
SATB1-215ENST00000487699 SPINK5Q9NQ38 1064 aaPredicted RBP12.69□□□□□ -0.38
SATB1-215ENST00000487699 CD2APQ9Y5K6 639 aa12.69□□□□□ -0.38
SATB1-215ENST00000487699 LAMB4A4D0S4 1761 aa12.69□□□□□ -0.38
SATB1-215ENST00000487699 ZNF521Q96K83 1311 aa12.68□□□□□ -0.38
SATB1-215ENST00000487699 A0A087WZG4 1122 aa12.68□□□□□ -0.38
SATB1-215ENST00000487699 TBC1D9BQ66K14 1250 aa12.68□□□□□ -0.38
SATB1-215ENST00000487699 DIEXFQ68CQ4 756 aaKnown RBP12.68□□□□□ -0.38
SATB1-215ENST00000487699 TTLL7Q6ZT98 887 aa12.68□□□□□ -0.38
SATB1-215ENST00000487699 C8orf58Q8NAV2 365 aa12.68□□□□□ -0.38
SATB1-215ENST00000487699 ANXA1P04083 346 aa12.67□□□□□ -0.38
SATB1-215ENST00000487699 GNAI1P63096 354 aa12.67□□□□□ -0.38
SATB1-215ENST00000487699 HLFQ16534 295 aa12.67□□□□□ -0.38
SATB1-215ENST00000487699 DZIP3Q86Y13 1208 aaKnown RBP12.67□□□□□ -0.38
SATB1-215ENST00000487699 TSPYL6Q8N831 410 aa12.67□□□□□ -0.38
SATB1-215ENST00000487699 C10orf71Q711Q0 1435 aa12.67□□□□□ -0.38
SATB1-215ENST00000487699 KIAA1551Q9HCM1 1747 aa12.67□□□□□ -0.38
SATB1-215ENST00000487699 SCN7AQ01118 1682 aa12.67□□□□□ -0.38
SATB1-215ENST00000487699 IL16Q14005 1332 aa12.66□□□□□ -0.38
SATB1-215ENST00000487699 ERBB4Q15303 1308 aa12.66□□□□□ -0.38
SATB1-215ENST00000487699 NRXN2Q9P2S2 1712 aa12.66□□□□□ -0.38
SATB1-215ENST00000487699 EIF2S2P20042 333 aaKnown RBP12.66□□□□□ -0.38
SATB1-215ENST00000487699 KCNA3P22001 575 aa12.66□□□□□ -0.38
SATB1-215ENST00000487699 DUSP27Q5VZP5 1158 aa12.66□□□□□ -0.38
SATB1-215ENST00000487699 TSR2Q969E8 191 aaKnown RBP12.66□□□□□ -0.38
SATB1-215ENST00000487699 ZNF330Q9Y3S2 320 aaPredicted RBP12.66□□□□□ -0.38
SATB1-215ENST00000487699 SALL2Q9Y467 1007 aaPredicted RBP12.66□□□□□ -0.38
SATB1-215ENST00000487699 KIF13BQ9NQT8 1826 aa12.65□□□□□ -0.38
SATB1-215ENST00000487699 RGL2O15211 777 aa12.65□□□□□ -0.38
SATB1-215ENST00000487699 HOXB7P09629 217 aa12.65□□□□□ -0.38
SATB1-215ENST00000487699 MYL6BP14649 208 aa12.65□□□□□ -0.38
SATB1-215ENST00000487699 CALD1Q05682 793 aaKnown RBP12.65□□□□□ -0.38
SATB1-215ENST00000487699 CLEC4GQ6UXB4 293 aa12.65□□□□□ -0.38
SATB1-215ENST00000487699 WDR63Q8IWG1 891 aa12.65□□□□□ -0.38
SATB1-215ENST00000487699 NECTIN2Q92692 538 aa12.65□□□□□ -0.38
SATB1-215ENST00000487699 PARP3Q9Y6F1 533 aa12.65□□□□□ -0.38
SATB1-215ENST00000487699 BCORQ6W2J9 1755 aa12.65□□□□□ -0.38
SATB1-215ENST00000487699 PXDNLA1KZ92 1463 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms