RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 CDCA7LQ96GN5 454 aa17.24■□□□□ 0.35
COL4A6-207ENST00000487645 CHMP4AQ9BY43 222 aa17.24■□□□□ 0.35
COL4A6-207ENST00000487645 CACNA1FO60840 1977 aa17.24■□□□□ 0.35
COL4A6-207ENST00000487645 PRAMEF22A3QJZ6 481 aa17.23■□□□□ 0.35
COL4A6-207ENST00000487645 CRKLP46109 303 aaKnown RBP17.23■□□□□ 0.35
COL4A6-207ENST00000487645 SLC15A2Q16348 729 aa17.23■□□□□ 0.35
COL4A6-207ENST00000487645 DUSP27Q5VZP5 1158 aa17.23■□□□□ 0.35
COL4A6-207ENST00000487645 C8orf58Q8NAV2 365 aa17.23■□□□□ 0.35
COL4A6-207ENST00000487645 STK32BQ9NY57 414 aa17.23■□□□□ 0.35
COL4A6-207ENST00000487645 QSER1Q2KHR3 1735 aa17.23■□□□□ 0.35
COL4A6-207ENST00000487645 UBR3Q6ZT12 1888 aa17.22■□□□□ 0.35
COL4A6-207ENST00000487645 KRT24Q2M2I5 525 aa17.22■□□□□ 0.35
COL4A6-207ENST00000487645 INTS5Q6P9B9 1019 aaKnown RBP17.22■□□□□ 0.35
COL4A6-207ENST00000487645 AK7Q96M32 723 aa17.22■□□□□ 0.35
COL4A6-207ENST00000487645 CCDC87Q9NVE4 849 aa17.22■□□□□ 0.35
COL4A6-207ENST00000487645 RPS6KA4O75676 772 aa17.21■□□□□ 0.35
COL4A6-207ENST00000487645 TUBGCP6Q96RT7 1819 aa17.2■□□□□ 0.34
COL4A6-207ENST00000487645 EXOSC9Q06265 439 aaKnown RBP17.2■□□□□ 0.34
COL4A6-207ENST00000487645 ZNF827Q17R98 1081 aa17.2■□□□□ 0.34
COL4A6-207ENST00000487645 FLAD1Q8NFF5 587 aa17.2■□□□□ 0.34
COL4A6-207ENST00000487645 TFCP2L1Q9NZI6 479 aa17.2■□□□□ 0.34
COL4A6-207ENST00000487645 ERBB4Q15303 1308 aa17.2■□□□□ 0.34
COL4A6-207ENST00000487645 ELL2O00472 640 aaPredicted RBP17.19■□□□□ 0.34
COL4A6-207ENST00000487645 A1BGP04217 495 aa17.19■□□□□ 0.34
COL4A6-207ENST00000487645 TWISTNBQ3B726 338 aaPredicted RBP17.19■□□□□ 0.34
COL4A6-207ENST00000487645 TSPYL6Q8N831 410 aa17.19■□□□□ 0.34
COL4A6-207ENST00000487645 ANO8Q9HCE9 1232 aaPredicted RBP17.19■□□□□ 0.34
COL4A6-207ENST00000487645 RTCBQ9Y3I0 505 aaKnown RBP17.19■□□□□ 0.34
COL4A6-207ENST00000487645 GNPATO15228 680 aa17.18■□□□□ 0.34
COL4A6-207ENST00000487645 VAMP4O75379 141 aa17.18■□□□□ 0.34
COL4A6-207ENST00000487645 EIF2S2P20042 333 aaKnown RBP17.18■□□□□ 0.34
COL4A6-207ENST00000487645 ADRA2BP18089 450 aa17.17■□□□□ 0.34
COL4A6-207ENST00000487645 SSFA2P28290 1259 aa17.17■□□□□ 0.34
COL4A6-207ENST00000487645 IL6STP40189 918 aaPredicted RBP17.17■□□□□ 0.34
COL4A6-207ENST00000487645 HDGFL1Q5TGJ6 251 aa17.17■□□□□ 0.34
COL4A6-207ENST00000487645 CCDC30Q5VVM6 783 aa17.17■□□□□ 0.34
COL4A6-207ENST00000487645 ZBTB1Q9Y2K1 713 aa17.17■□□□□ 0.34
COL4A6-207ENST00000487645 NBPF26B4DH59 902 aa17.16■□□□□ 0.34
COL4A6-207ENST00000487645 CANXP27824 592 aaKnown RBP17.16■□□□□ 0.34
COL4A6-207ENST00000487645 EIF5P55010 431 aaKnown RBP17.16■□□□□ 0.34
COL4A6-207ENST00000487645 TRAPPC3LQ5T215 181 aa17.16■□□□□ 0.34
COL4A6-207ENST00000487645 NBPF10Q6P3W6 841 aaKnown RBP17.16■□□□□ 0.34
COL4A6-207ENST00000487645 NBPF15Q8N660 670 aa17.16■□□□□ 0.34
COL4A6-207ENST00000487645 DDX21Q9NR30 783 aaKnown RBP eCLIP17.16■□□□□ 0.34
COL4A6-207ENST00000487645 DBF4Q9UBU7 674 aaPredicted RBP17.16■□□□□ 0.34
COL4A6-207ENST00000487645 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.15■□□□□ 0.34
COL4A6-207ENST00000487645 CT47B1P0C2W7 299 aaPredicted RBP17.15■□□□□ 0.34
COL4A6-207ENST00000487645 ZNF428Q96B54 188 aa17.15■□□□□ 0.34
COL4A6-207ENST00000487645 A0A087WZG4 1122 aa17.14■□□□□ 0.33
COL4A6-207ENST00000487645 R3HDM1Q15032 1099 aaKnown RBP17.14■□□□□ 0.33
COL4A6-207ENST00000487645 PDIA6Q15084 440 aa17.14■□□□□ 0.33
COL4A6-207ENST00000487645 NPM2Q86SE8 214 aaKnown RBP17.14■□□□□ 0.33
COL4A6-207ENST00000487645 NECTIN2Q92692 538 aa17.14■□□□□ 0.33
COL4A6-207ENST00000487645 YTHDC1Q96MU7 727 aaKnown RBP17.14■□□□□ 0.33
COL4A6-207ENST00000487645 PNPLA7Q6ZV29 1317 aa17.14■□□□□ 0.33
COL4A6-207ENST00000487645 AMIGO3Q86WK7 504 aa17.13■□□□□ 0.33
COL4A6-207ENST00000487645 COL23A1Q86Y22 540 aaPredicted RBP17.13■□□□□ 0.33
COL4A6-207ENST00000487645 ARHGEF1Q92888 912 aaKnown RBP17.13■□□□□ 0.33
COL4A6-207ENST00000487645 HYPKQ9NX55 129 aa17.13■□□□□ 0.33
COL4A6-207ENST00000487645 MYL6BP14649 208 aa17.12■□□□□ 0.33
COL4A6-207ENST00000487645 RFC4P35249 363 aa17.12■□□□□ 0.33
COL4A6-207ENST00000487645 STK31Q9BXU1 1019 aa17.12■□□□□ 0.33
COL4A6-207ENST00000487645 CHPF2Q9P2E5 772 aa17.12■□□□□ 0.33
COL4A6-207ENST00000487645 C4AP0C0L4 1744 aa17.11■□□□□ 0.33
COL4A6-207ENST00000487645 PHF14O94880 888 aa17.11■□□□□ 0.33
COL4A6-207ENST00000487645 PIP4K2AP48426 406 aaPredicted RBP17.11■□□□□ 0.33
COL4A6-207ENST00000487645 LRP10Q7Z4F1 713 aa17.11■□□□□ 0.33
COL4A6-207ENST00000487645 SLC16A10Q8TF71 515 aa17.11■□□□□ 0.33
COL4A6-207ENST00000487645 COL15A1P39059 1388 aa17.11■□□□□ 0.33
COL4A6-207ENST00000487645 PROSER3Q2NL68 480 aa17.1■□□□□ 0.33
COL4A6-207ENST00000487645 SMIM5Q71RC9 77 aa17.1■□□□□ 0.33
COL4A6-207ENST00000487645 NARFQ9UHQ1 456 aa17.1■□□□□ 0.33
COL4A6-207ENST00000487645 CASZ1Q86V15 1759 aa17.1■□□□□ 0.33
COL4A6-207ENST00000487645 PSDA5PKW4 1024 aaPredicted RBP17.09■□□□□ 0.33
COL4A6-207ENST00000487645 MSH5O43196 834 aa17.09■□□□□ 0.33
COL4A6-207ENST00000487645 ZPR1O75312 459 aa17.09■□□□□ 0.33
COL4A6-207ENST00000487645 ZNF330Q9Y3S2 320 aaPredicted RBP17.09■□□□□ 0.33
COL4A6-207ENST00000487645 RGL2O15211 777 aa17.08■□□□□ 0.32
COL4A6-207ENST00000487645 ANXA1P04083 346 aa17.08■□□□□ 0.32
COL4A6-207ENST00000487645 SLC4A2P04920 1241 aa17.08■□□□□ 0.32
COL4A6-207ENST00000487645 ALDH1L2Q3SY69 923 aa17.08■□□□□ 0.32
COL4A6-207ENST00000487645 DZIP3Q86Y13 1208 aaKnown RBP17.08■□□□□ 0.32
COL4A6-207ENST00000487645 NUP98P52948 1817 aa17.07■□□□□ 0.32
COL4A6-207ENST00000487645 USP42Q9H9J4 1324 aaKnown RBP17.07■□□□□ 0.32
COL4A6-207ENST00000487645 ERVV-1B6SEH8 477 aa17.07■□□□□ 0.32
COL4A6-207ENST00000487645 COPS6Q7L5N1 327 aa17.07■□□□□ 0.32
COL4A6-207ENST00000487645 PDGFDQ9GZP0 370 aaPredicted RBP17.07■□□□□ 0.32
COL4A6-207ENST00000487645 TBC1D2BQ9UPU7 963 aa17.07■□□□□ 0.32
COL4A6-207ENST00000487645 TCERG1O14776 1098 aaKnown RBP17.06■□□□□ 0.32
COL4A6-207ENST00000487645 CLEC4GQ6UXB4 293 aa17.06■□□□□ 0.32
COL4A6-207ENST00000487645 KIF6Q6ZMV9 814 aa17.06■□□□□ 0.32
COL4A6-207ENST00000487645 XAGE3Q8WTP9 111 aa17.06■□□□□ 0.32
COL4A6-207ENST00000487645 ARXQ96QS3 562 aa17.06■□□□□ 0.32
COL4A6-207ENST00000487645 BCORQ6W2J9 1755 aa17.05■□□□□ 0.32
COL4A6-207ENST00000487645 COL24A1Q17RW2 1714 aa17.05■□□□□ 0.32
COL4A6-207ENST00000487645 MAP3K15Q6ZN16 1313 aa17.05■□□□□ 0.32
COL4A6-207ENST00000487645 CAMTA2O94983 1202 aa17.05■□□□□ 0.32
COL4A6-207ENST00000487645 USPL1Q5W0Q7 1092 aa17.05■□□□□ 0.32
COL4A6-207ENST00000487645 TTLL7Q6ZT98 887 aa17.05■□□□□ 0.32
COL4A6-207ENST00000487645 NLGN1Q8N2Q7 840 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms