RNA–Protein interactions for RNA: ENST00000487386.1

LINC00888-204, long intergenic non-protein coding RNA 888, humanhuman

BASIC

Gene LINC00888, Length 421 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-204ENST00000487386 MSX1P28360 303 aa8.36□□□□□ -1.07
LINC00888-204ENST00000487386 PLA2G4AP47712 749 aa8.36□□□□□ -1.07
LINC00888-204ENST00000487386 DBN1Q16643 649 aa8.36□□□□□ -1.07
LINC00888-204ENST00000487386 TBCELQ5QJ74 424 aa8.36□□□□□ -1.07
LINC00888-204ENST00000487386 TRIM22Q8IYM9 498 aa8.36□□□□□ -1.07
LINC00888-204ENST00000487386 IRF7Q92985 503 aa8.36□□□□□ -1.07
LINC00888-204ENST00000487386 GMCL1Q96IK5 515 aa8.36□□□□□ -1.07
LINC00888-204ENST00000487386 PPP1R15AO75807 674 aaPredicted RBP8.35□□□□□ -1.07
LINC00888-204ENST00000487386 NOS2P35228 1153 aa8.35□□□□□ -1.07
LINC00888-204ENST00000487386 FAM69CQ0P6D2 419 aa8.35□□□□□ -1.07
LINC00888-204ENST00000487386 GPR161Q8N6U8 529 aaKnown RBP8.35□□□□□ -1.07
LINC00888-204ENST00000487386 GAS2L1Q99501 681 aaPredicted RBP8.35□□□□□ -1.07
LINC00888-204ENST00000487386 CABP1Q9NZU7 370 aa8.35□□□□□ -1.07
LINC00888-204ENST00000487386 THBS1P07996 1170 aa8.34□□□□□ -1.07
LINC00888-204ENST00000487386 ATP4AP20648 1035 aa8.34□□□□□ -1.07
LINC00888-204ENST00000487386 VWA5B2Q8N398 1253 aa8.34□□□□□ -1.07
LINC00888-204ENST00000487386 STAG2Q8N3U4 1231 aa8.34□□□□□ -1.07
LINC00888-204ENST00000487386 GAS2L2Q8NHY3 880 aa8.34□□□□□ -1.07
LINC00888-204ENST00000487386 C1orf216Q8TAB5 229 aa8.34□□□□□ -1.07
LINC00888-204ENST00000487386 STK32AQ8WU08 396 aa8.34□□□□□ -1.07
LINC00888-204ENST00000487386 L3MBTL2Q969R5 705 aa8.34□□□□□ -1.07
LINC00888-204ENST00000487386 ZDHHC3Q9NYG2 299 aa8.34□□□□□ -1.07
LINC00888-204ENST00000487386 ATAD2Q6PL18 1390 aa8.34□□□□□ -1.07
LINC00888-204ENST00000487386 ACIN1Q9UKV3 1341 aaKnown RBP8.33□□□□□ -1.08
LINC00888-204ENST00000487386 EML1O00423 815 aa8.33□□□□□ -1.08
LINC00888-204ENST00000487386 HIRAP54198 1017 aaPredicted RBP8.33□□□□□ -1.08
LINC00888-204ENST00000487386 PSMA6P60900 246 aaKnown RBP8.33□□□□□ -1.08
LINC00888-204ENST00000487386 RIPOR1Q6ZS17 1223 aa8.33□□□□□ -1.08
LINC00888-204ENST00000487386 SV2AQ7L0J3 742 aa8.33□□□□□ -1.08
LINC00888-204ENST00000487386 C7orf43Q8WVR3 580 aa8.33□□□□□ -1.08
LINC00888-204ENST00000487386 ZNF837Q96EG3 531 aaPredicted RBP8.33□□□□□ -1.08
LINC00888-204ENST00000487386 HINFPQ9BQA5 517 aa8.33□□□□□ -1.08
LINC00888-204ENST00000487386 CRISPLD1Q9H336 500 aa8.33□□□□□ -1.08
LINC00888-204ENST00000487386 PARP3Q9Y6F1 533 aa8.33□□□□□ -1.08
LINC00888-204ENST00000487386 SERTM1A2A2V5 107 aa8.32□□□□□ -1.08
LINC00888-204ENST00000487386 H7C1W4 665 aa8.32□□□□□ -1.08
LINC00888-204ENST00000487386 IGFBP4P22692 258 aa8.32□□□□□ -1.08
LINC00888-204ENST00000487386 WEE1P30291 646 aa8.32□□□□□ -1.08
LINC00888-204ENST00000487386 UBAP2LQ14157 1087 aaKnown RBP8.32□□□□□ -1.08
LINC00888-204ENST00000487386 SWI5Q1ZZU3 235 aa8.32□□□□□ -1.08
LINC00888-204ENST00000487386 SH3PXD2AQ5TCZ1 1133 aa8.32□□□□□ -1.08
LINC00888-204ENST00000487386 GPAMQ9HCL2 828 aa8.32□□□□□ -1.08
LINC00888-204ENST00000487386 WIPF1O43516 503 aa8.31□□□□□ -1.08
LINC00888-204ENST00000487386 LGR5O75473 907 aa8.31□□□□□ -1.08
LINC00888-204ENST00000487386 GMPRP36959 345 aa8.31□□□□□ -1.08
LINC00888-204ENST00000487386 TXLNAP40222 546 aa8.31□□□□□ -1.08
LINC00888-204ENST00000487386 LBRQ14739 615 aaKnown RBP8.31□□□□□ -1.08
LINC00888-204ENST00000487386 NBPF1Q3BBV0 1214 aa8.31□□□□□ -1.08
LINC00888-204ENST00000487386 TMEM164Q5U3C3 297 aa8.31□□□□□ -1.08
LINC00888-204ENST00000487386 SCG3Q8WXD2 468 aaKnown RBP8.31□□□□□ -1.08
LINC00888-204ENST00000487386 AIDAQ96BJ3 306 aa8.31□□□□□ -1.08
LINC00888-204ENST00000487386 C2orf49Q9BVC5 232 aaPredicted RBP8.31□□□□□ -1.08
LINC00888-204ENST00000487386 RUBCNLQ9H714 662 aa8.31□□□□□ -1.08
LINC00888-204ENST00000487386 CDC14CA4D256 554 aa8.3□□□□□ -1.08
LINC00888-204ENST00000487386 PPP1R12BO60237 982 aaPredicted RBP8.3□□□□□ -1.08
LINC00888-204ENST00000487386 NUCKS1Q9H1E3 243 aaKnown RBP8.3□□□□□ -1.08
LINC00888-204ENST00000487386 C1orf53Q5VUE5 145 aa8.29□□□□□ -1.08
LINC00888-204ENST00000487386 ZIC5Q96T25 663 aa8.29□□□□□ -1.08
LINC00888-204ENST00000487386 ZNF232Q9UNY5 417 aa8.29□□□□□ -1.08
LINC00888-204ENST00000487386 CSB-PGBD3P0DP91 1061 aa8.28□□□□□ -1.08
LINC00888-204ENST00000487386 TATP17735 454 aaPredicted RBP8.28□□□□□ -1.08
LINC00888-204ENST00000487386 KRT76Q01546 638 aa8.28□□□□□ -1.08
LINC00888-204ENST00000487386 OCLNQ16625 522 aa8.28□□□□□ -1.08
LINC00888-204ENST00000487386 PGBD3Q8N328 593 aa8.28□□□□□ -1.08
LINC00888-204ENST00000487386 ARID3AQ99856 593 aa8.28□□□□□ -1.08
LINC00888-204ENST00000487386 CHMP3Q9Y3E7 222 aa8.28□□□□□ -1.08
LINC00888-204ENST00000487386 NLRP8Q86W28 1048 aa8.27□□□□□ -1.09
LINC00888-204ENST00000487386 CLP1Q92989 425 aaKnown RBP8.27□□□□□ -1.09
LINC00888-204ENST00000487386 GTPBP3Q969Y2 492 aaKnown RBP8.27□□□□□ -1.09
LINC00888-204ENST00000487386 COL25A1Q9BXS0 654 aaPredicted RBP8.27□□□□□ -1.09
LINC00888-204ENST00000487386 SLAIN2Q9P270 581 aa8.27□□□□□ -1.09
LINC00888-204ENST00000487386 HCN4Q9Y3Q4 1203 aa8.27□□□□□ -1.09
LINC00888-204ENST00000487386 GPC6Q9Y625 555 aaPredicted RBP8.27□□□□□ -1.09
LINC00888-204ENST00000487386 A0A1W2PNR3 127 aa8.26□□□□□ -1.09
LINC00888-204ENST00000487386 FOXO3O43524 673 aa8.26□□□□□ -1.09
LINC00888-204ENST00000487386 GAS6Q14393 721 aa8.26□□□□□ -1.09
LINC00888-204ENST00000487386 EFHC2Q5JST6 749 aa8.26□□□□□ -1.09
LINC00888-204ENST00000487386 RNFT1Q5M7Z0 435 aa8.26□□□□□ -1.09
LINC00888-204ENST00000487386 CHMP7Q8WUX9 453 aaPredicted RBP8.26□□□□□ -1.09
LINC00888-204ENST00000487386 KLRG1Q96E93 195 aa8.26□□□□□ -1.09
LINC00888-204ENST00000487386 PHACTR1Q9C0D0 580 aa8.26□□□□□ -1.09
LINC00888-204ENST00000487386 NDFIP2Q9NV92 336 aa8.26□□□□□ -1.09
LINC00888-204ENST00000487386 TMEM88BA6NKF7 163 aa8.25□□□□□ -1.09
LINC00888-204ENST00000487386 ARSJQ5FYB0 599 aaPredicted RBP8.25□□□□□ -1.09
LINC00888-204ENST00000487386 FOXR1Q6PIV2 292 aa8.25□□□□□ -1.09
LINC00888-204ENST00000487386 ALDH16A1Q8IZ83 802 aa8.25□□□□□ -1.09
LINC00888-204ENST00000487386 PRIMPOLQ96LW4 560 aa8.25□□□□□ -1.09
LINC00888-204ENST00000487386 CFHR5Q9BXR6 569 aa8.25□□□□□ -1.09
LINC00888-204ENST00000487386 GPR25O00155 361 aa8.24□□□□□ -1.09
LINC00888-204ENST00000487386 PRMT3O60678 531 aa8.24□□□□□ -1.09
LINC00888-204ENST00000487386 ZCCHC2Q9C0B9 1178 aaKnown RBP8.24□□□□□ -1.09
LINC00888-204ENST00000487386 LORP23490 312 aaPredicted RBP8.23□□□□□ -1.09
LINC00888-204ENST00000487386 FKBP5Q13451 457 aaPredicted RBP8.23□□□□□ -1.09
LINC00888-204ENST00000487386 SAMD5Q5TGI4 173 aa8.23□□□□□ -1.09
LINC00888-204ENST00000487386 FIGNL1Q6PIW4 674 aa8.23□□□□□ -1.09
LINC00888-204ENST00000487386 BICDL1Q6ZP65 573 aa8.23□□□□□ -1.09
LINC00888-204ENST00000487386 RHPN1Q8TCX5 695 aa8.23□□□□□ -1.09
LINC00888-204ENST00000487386 CXXC1Q9P0U4 656 aaPredicted RBP8.23□□□□□ -1.09
LINC00888-204ENST00000487386 PCDHGC4Q9Y5F7 938 aa8.23□□□□□ -1.09
LINC00888-204ENST00000487386 BNIP3LO60238 219 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms