RNA–Protein interactions for RNA: ENST00000486837.1

LMBR1-218, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-218ENST00000486837 SOS2Q07890 1332 aaPredicted RBP8.87□□□□□ -0.99
LMBR1-218ENST00000486837 TTLL8A6PVC2 850 aa8.87□□□□□ -0.99
LMBR1-218ENST00000486837 TBCELQ5QJ74 424 aa8.87□□□□□ -0.99
LMBR1-218ENST00000486837 ZFP42Q96MM3 310 aa8.87□□□□□ -0.99
LMBR1-218ENST00000486837 NOS2P35228 1153 aa8.86□□□□□ -0.99
LMBR1-218ENST00000486837 HIRAP54198 1017 aaPredicted RBP8.86□□□□□ -0.99
LMBR1-218ENST00000486837 WDR44Q5JSH3 913 aa8.86□□□□□ -0.99
LMBR1-218ENST00000486837 CHMP7Q8WUX9 453 aaPredicted RBP8.86□□□□□ -0.99
LMBR1-218ENST00000486837 VTI1AQ96AJ9 217 aa8.86□□□□□ -0.99
LMBR1-218ENST00000486837 ATP13A2Q9NQ11 1180 aa8.86□□□□□ -0.99
LMBR1-218ENST00000486837 CABP1Q9NZU7 370 aa8.86□□□□□ -0.99
LMBR1-218ENST00000486837 IVNS1ABPQ9Y6Y0 642 aa8.86□□□□□ -0.99
LMBR1-218ENST00000486837 SERTM1A2A2V5 107 aa8.85□□□□□ -0.99
LMBR1-218ENST00000486837 ST8SIA5O15466 376 aa8.85□□□□□ -0.99
LMBR1-218ENST00000486837 LYSMD3Q7Z3D4 306 aa8.85□□□□□ -0.99
LMBR1-218ENST00000486837 EML1O00423 815 aa8.84□□□□□ -0.99
LMBR1-218ENST00000486837 C4orf17Q53FE4 359 aa8.84□□□□□ -0.99
LMBR1-218ENST00000486837 ZDHHC1Q8WTX9 485 aa8.84□□□□□ -0.99
LMBR1-218ENST00000486837 L3MBTL2Q969R5 705 aa8.83□□□□□ -1
LMBR1-218ENST00000486837 MKNK1Q9BUB5 465 aa8.83□□□□□ -1
LMBR1-218ENST00000486837 EGFL7Q9UHF1 273 aa8.83□□□□□ -1
LMBR1-218ENST00000486837 ZNF232Q9UNY5 417 aa8.83□□□□□ -1
LMBR1-218ENST00000486837 NBPF10Q6P3W6 841 aaKnown RBP8.82□□□□□ -1
LMBR1-218ENST00000486837 PRICKLE2Q7Z3G6 844 aa8.82□□□□□ -1
LMBR1-218ENST00000486837 SCNN1AP37088 669 aa8.81□□□□□ -1
LMBR1-218ENST00000486837 PLA2G4AP47712 749 aa8.81□□□□□ -1
LMBR1-218ENST00000486837 POU4F2Q12837 409 aa8.81□□□□□ -1
LMBR1-218ENST00000486837 C1orf53Q5VUE5 145 aa8.81□□□□□ -1
LMBR1-218ENST00000486837 KIFC2Q96AC6 838 aa8.81□□□□□ -1
LMBR1-218ENST00000486837 MYO19Q96H55 970 aa8.81□□□□□ -1
LMBR1-218ENST00000486837 SENP2Q9HC62 589 aa8.81□□□□□ -1
LMBR1-218ENST00000486837 ZDHHC3Q9NYG2 299 aa8.81□□□□□ -1
LMBR1-218ENST00000486837 FIGNL2A6NMB9 653 aa8.8□□□□□ -1
LMBR1-218ENST00000486837 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.8□□□□□ -1
LMBR1-218ENST00000486837 NBPF1Q3BBV0 1214 aa8.8□□□□□ -1
LMBR1-218ENST00000486837 SEPT3Q9UH03 358 aa8.8□□□□□ -1
LMBR1-218ENST00000486837 DACH1Q9UI36 760 aa8.8□□□□□ -1
LMBR1-218ENST00000486837 SERPINB4P48594 390 aa8.79□□□□□ -1
LMBR1-218ENST00000486837 SH3PXD2AQ5TCZ1 1133 aa8.79□□□□□ -1
LMBR1-218ENST00000486837 C16orf46Q6P387 395 aa8.79□□□□□ -1
LMBR1-218ENST00000486837 CAPN12Q6ZSI9 719 aa8.79□□□□□ -1
LMBR1-218ENST00000486837 ALDH16A1Q8IZ83 802 aa8.79□□□□□ -1
LMBR1-218ENST00000486837 GTF3C2Q8WUA4 911 aaPredicted RBP8.79□□□□□ -1
LMBR1-218ENST00000486837 DNMT3LQ9UJW3 386 aa8.79□□□□□ -1
LMBR1-218ENST00000486837 GPC6Q9Y625 555 aaPredicted RBP8.79□□□□□ -1
LMBR1-218ENST00000486837 PARP3Q9Y6F1 533 aa8.79□□□□□ -1
LMBR1-218ENST00000486837 A0A1B0GTH6 734 aa8.78□□□□□ -1
LMBR1-218ENST00000486837 MAN1A2O60476 641 aa8.78□□□□□ -1
LMBR1-218ENST00000486837 PHKA2P46019 1235 aa8.78□□□□□ -1
LMBR1-218ENST00000486837 SF3B2Q13435 895 aaKnown RBP8.78□□□□□ -1
LMBR1-218ENST00000486837 RTN1Q16799 776 aa8.78□□□□□ -1
LMBR1-218ENST00000486837 Q6ZNB5 142 aa8.78□□□□□ -1
LMBR1-218ENST00000486837 HELQQ8TDG4 1101 aa8.78□□□□□ -1
LMBR1-218ENST00000486837 PHACTR1Q9C0D0 580 aa8.78□□□□□ -1
LMBR1-218ENST00000486837 GZF1Q9H116 711 aaPredicted RBP8.78□□□□□ -1
LMBR1-218ENST00000486837 QTRT2Q9H974 415 aaKnown RBP8.78□□□□□ -1
LMBR1-218ENST00000486837 TIMMDC1Q9NPL8 285 aa8.78□□□□□ -1
LMBR1-218ENST00000486837 HCN4Q9Y3Q4 1203 aa8.78□□□□□ -1
LMBR1-218ENST00000486837 SOWAHDA6NJG2 315 aa8.77□□□□□ -1.01
LMBR1-218ENST00000486837 TATP17735 454 aaPredicted RBP8.77□□□□□ -1.01
LMBR1-218ENST00000486837 TXLNAP40222 546 aa8.77□□□□□ -1.01
LMBR1-218ENST00000486837 NAA30Q147X3 362 aaPredicted RBP8.77□□□□□ -1.01
LMBR1-218ENST00000486837 ICMTO60725 284 aa8.76□□□□□ -1.01
LMBR1-218ENST00000486837 ABL1P00519 1130 aa8.76□□□□□ -1.01
LMBR1-218ENST00000486837 RHOQP17081 205 aa8.76□□□□□ -1.01
LMBR1-218ENST00000486837 HIF1AQ16665 826 aa8.76□□□□□ -1.01
LMBR1-218ENST00000486837 COX20Q5RI15 118 aa8.76□□□□□ -1.01
LMBR1-218ENST00000486837 SND1Q7KZF4 910 aaKnown RBP eCLIP8.76□□□□□ -1.01
LMBR1-218ENST00000486837 AIDAQ96BJ3 306 aa8.76□□□□□ -1.01
LMBR1-218ENST00000486837 NGLY1Q96IV0 654 aa8.76□□□□□ -1.01
LMBR1-218ENST00000486837 TRIM47Q96LD4 638 aa8.76□□□□□ -1.01
LMBR1-218ENST00000486837 DNMT3AQ9Y6K1 912 aaPredicted RBP8.76□□□□□ -1.01
LMBR1-218ENST00000486837 FKBP4Q02790 459 aaKnown RBP eCLIP8.75□□□□□ -1.01
LMBR1-218ENST00000486837 SAP130Q9H0E3 1048 aa8.75□□□□□ -1.01
LMBR1-218ENST00000486837 DYRK1BQ9Y463 629 aa8.75□□□□□ -1.01
LMBR1-218ENST00000486837 NPR3P17342 541 aa8.74□□□□□ -1.01
LMBR1-218ENST00000486837 ZNF211Q13398 564 aaPredicted RBP8.74□□□□□ -1.01
LMBR1-218ENST00000486837 C11orf91Q3C1V1 193 aa8.74□□□□□ -1.01
LMBR1-218ENST00000486837 RHPN1Q8TCX5 695 aa8.74□□□□□ -1.01
LMBR1-218ENST00000486837 C7orf43Q8WVR3 580 aa8.74□□□□□ -1.01
LMBR1-218ENST00000486837 GMPR2Q9P2T1 348 aaKnown RBP8.74□□□□□ -1.01
LMBR1-218ENST00000486837 LRFN2Q9ULH4 789 aa8.74□□□□□ -1.01
LMBR1-218ENST00000486837 ATP4AP20648 1035 aa8.73□□□□□ -1.01
LMBR1-218ENST00000486837 MSX1P28360 303 aa8.73□□□□□ -1.01
LMBR1-218ENST00000486837 GLYCTKQ8IVS8 523 aa8.73□□□□□ -1.01
LMBR1-218ENST00000486837 PODXL2Q9NZ53 605 aa8.73□□□□□ -1.01
LMBR1-218ENST00000486837 STIM2Q9P246 746 aa8.73□□□□□ -1.01
LMBR1-218ENST00000486837 H3BRB1 525 aa8.72□□□□□ -1.01
LMBR1-218ENST00000486837 TNFRSF10BO14763 440 aa8.72□□□□□ -1.01
LMBR1-218ENST00000486837 FAM13AO94988 1023 aa8.72□□□□□ -1.01
LMBR1-218ENST00000486837 BRD2P25440 801 aaKnown RBP8.72□□□□□ -1.01
LMBR1-218ENST00000486837 TMCO4Q5TGY1 634 aa8.72□□□□□ -1.01
LMBR1-218ENST00000486837 ABTB2Q8N961 1025 aa8.72□□□□□ -1.01
LMBR1-218ENST00000486837 TUT1Q9H6E5 874 aaKnown RBP8.72□□□□□ -1.01
LMBR1-218ENST00000486837 SENP3-EIF4A1A0A087X0R7 540 aa8.71□□□□□ -1.02
LMBR1-218ENST00000486837 SLC35F4A4IF30 521 aa8.71□□□□□ -1.02
LMBR1-218ENST00000486837 F11P03951 625 aa8.71□□□□□ -1.02
LMBR1-218ENST00000486837 DGKZQ13574 1117 aa8.71□□□□□ -1.02
LMBR1-218ENST00000486837 BICDL1Q6ZP65 573 aa8.71□□□□□ -1.02
LMBR1-218ENST00000486837 CRISPLD1Q9H336 500 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms