RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 GPAMQ9HCL2 828 aa10.71□□□□□ -0.69
LTN1-206ENST00000486427 CABP1Q9NZU7 370 aa10.71□□□□□ -0.69
LTN1-206ENST00000486427 PARP3Q9Y6F1 533 aa10.71□□□□□ -0.69
LTN1-206ENST00000486427 F11P03951 625 aa10.7□□□□□ -0.7
LTN1-206ENST00000486427 MSX1P28360 303 aa10.7□□□□□ -0.7
LTN1-206ENST00000486427 DBN1Q16643 649 aa10.7□□□□□ -0.7
LTN1-206ENST00000486427 NOVA2Q9UNW9 492 aaKnown RBP10.7□□□□□ -0.7
LTN1-206ENST00000486427 THBS1P07996 1170 aa10.69□□□□□ -0.7
LTN1-206ENST00000486427 PBXIP1Q96AQ6 731 aa10.69□□□□□ -0.7
LTN1-206ENST00000486427 ZNF837Q96EG3 531 aaPredicted RBP10.69□□□□□ -0.7
LTN1-206ENST00000486427 ZMIZ1Q9ULJ6 1067 aa10.69□□□□□ -0.7
LTN1-206ENST00000486427 C21orf2O43822 256 aa10.68□□□□□ -0.7
LTN1-206ENST00000486427 ATP4AP20648 1035 aa10.68□□□□□ -0.7
LTN1-206ENST00000486427 SH3PXD2AQ5TCZ1 1133 aa10.68□□□□□ -0.7
LTN1-206ENST00000486427 SV2AQ7L0J3 742 aa10.68□□□□□ -0.7
LTN1-206ENST00000486427 TRIM22Q8IYM9 498 aa10.68□□□□□ -0.7
LTN1-206ENST00000486427 TEAD4Q15561 434 aa10.67□□□□□ -0.7
LTN1-206ENST00000486427 AIDAQ96BJ3 306 aa10.67□□□□□ -0.7
LTN1-206ENST00000486427 RUBCNLQ9H714 662 aa10.67□□□□□ -0.7
LTN1-206ENST00000486427 ATG7O95352 703 aa10.66□□□□□ -0.7
LTN1-206ENST00000486427 NOS2P35228 1153 aa10.66□□□□□ -0.7
LTN1-206ENST00000486427 GAS2L2Q8NHY3 880 aa10.66□□□□□ -0.7
LTN1-206ENST00000486427 FAM200AQ8TCP9 573 aa10.66□□□□□ -0.7
LTN1-206ENST00000486427 STK32AQ8WU08 396 aa10.66□□□□□ -0.7
LTN1-206ENST00000486427 L3MBTL2Q969R5 705 aa10.66□□□□□ -0.7
LTN1-206ENST00000486427 HINFPQ9BQA5 517 aa10.66□□□□□ -0.7
LTN1-206ENST00000486427 TXLNAP40222 546 aa10.65□□□□□ -0.7
LTN1-206ENST00000486427 ELOAQ14241 798 aaKnown RBP10.65□□□□□ -0.7
LTN1-206ENST00000486427 EML1O00423 815 aa10.64□□□□□ -0.71
LTN1-206ENST00000486427 WIPF1O43516 503 aa10.64□□□□□ -0.71
LTN1-206ENST00000486427 KRT76Q01546 638 aa10.64□□□□□ -0.71
LTN1-206ENST00000486427 SCG3Q8WXD2 468 aaKnown RBP10.64□□□□□ -0.71
LTN1-206ENST00000486427 GTPBP3Q969Y2 492 aaKnown RBP10.64□□□□□ -0.71
LTN1-206ENST00000486427 NUCKS1Q9H1E3 243 aaKnown RBP10.64□□□□□ -0.71
LTN1-206ENST00000486427 ATAD2Q6PL18 1390 aa10.64□□□□□ -0.71
LTN1-206ENST00000486427 SERTM1A2A2V5 107 aa10.63□□□□□ -0.71
LTN1-206ENST00000486427 H7C1W4 665 aa10.63□□□□□ -0.71
LTN1-206ENST00000486427 GPR25O00155 361 aa10.63□□□□□ -0.71
LTN1-206ENST00000486427 PPP1R12BO60237 982 aaPredicted RBP10.63□□□□□ -0.71
LTN1-206ENST00000486427 PSMA6P60900 246 aaKnown RBP10.63□□□□□ -0.71
LTN1-206ENST00000486427 RNFT1Q5M7Z0 435 aa10.63□□□□□ -0.71
LTN1-206ENST00000486427 GMCL1Q96IK5 515 aa10.63□□□□□ -0.71
LTN1-206ENST00000486427 ZNF232Q9UNY5 417 aa10.63□□□□□ -0.71
LTN1-206ENST00000486427 FAM69CQ0P6D2 419 aa10.62□□□□□ -0.71
LTN1-206ENST00000486427 UBAP2LQ14157 1087 aaKnown RBP10.62□□□□□ -0.71
LTN1-206ENST00000486427 NBPF1Q3BBV0 1214 aa10.62□□□□□ -0.71
LTN1-206ENST00000486427 POTEAQ6S8J7 498 aa10.62□□□□□ -0.71
LTN1-206ENST00000486427 C1orf216Q8TAB5 229 aa10.62□□□□□ -0.71
LTN1-206ENST00000486427 COL25A1Q9BXS0 654 aaPredicted RBP10.62□□□□□ -0.71
LTN1-206ENST00000486427 CRISPLD1Q9H336 500 aa10.62□□□□□ -0.71
LTN1-206ENST00000486427 ZDHHC3Q9NYG2 299 aa10.62□□□□□ -0.71
LTN1-206ENST00000486427 CSB-PGBD3P0DP91 1061 aa10.61□□□□□ -0.71
LTN1-206ENST00000486427 PGBD3Q8N328 593 aa10.61□□□□□ -0.71
LTN1-206ENST00000486427 KLRG1Q96E93 195 aa10.61□□□□□ -0.71
LTN1-206ENST00000486427 ARID3AQ99856 593 aa10.61□□□□□ -0.71
LTN1-206ENST00000486427 GAS6Q14393 721 aa10.6□□□□□ -0.71
LTN1-206ENST00000486427 TMEM164Q5U3C3 297 aa10.6□□□□□ -0.71
LTN1-206ENST00000486427 CHMP7Q8WUX9 453 aaPredicted RBP10.6□□□□□ -0.71
LTN1-206ENST00000486427 HCN4Q9Y3Q4 1203 aa10.6□□□□□ -0.71
LTN1-206ENST00000486427 ACIN1Q9UKV3 1341 aaKnown RBP10.59□□□□□ -0.71
LTN1-206ENST00000486427 TATP17735 454 aaPredicted RBP10.59□□□□□ -0.71
LTN1-206ENST00000486427 HIRAP54198 1017 aaPredicted RBP10.59□□□□□ -0.71
LTN1-206ENST00000486427 C7orf43Q8WVR3 580 aa10.59□□□□□ -0.71
LTN1-206ENST00000486427 CNTNAP3BQ96NU0 1288 aa10.59□□□□□ -0.71
LTN1-206ENST00000486427 ZIC5Q96T25 663 aa10.59□□□□□ -0.71
LTN1-206ENST00000486427 C2orf49Q9BVC5 232 aaPredicted RBP10.59□□□□□ -0.71
LTN1-206ENST00000486427 CNTNAP3Q9BZ76 1288 aa10.59□□□□□ -0.71
LTN1-206ENST00000486427 A0A1W2PNR3 127 aa10.58□□□□□ -0.72
LTN1-206ENST00000486427 IGFBP4P22692 258 aa10.58□□□□□ -0.72
LTN1-206ENST00000486427 WEE1P30291 646 aa10.58□□□□□ -0.72
LTN1-206ENST00000486427 LBRQ14739 615 aaKnown RBP10.58□□□□□ -0.72
LTN1-206ENST00000486427 ARSJQ5FYB0 599 aaPredicted RBP10.58□□□□□ -0.72
LTN1-206ENST00000486427 EFHC2Q5JST6 749 aa10.58□□□□□ -0.72
LTN1-206ENST00000486427 STAG2Q8N3U4 1231 aa10.58□□□□□ -0.72
LTN1-206ENST00000486427 CHMP3Q9Y3E7 222 aa10.57□□□□□ -0.72
LTN1-206ENST00000486427 SWI5Q1ZZU3 235 aa10.56□□□□□ -0.72
LTN1-206ENST00000486427 FOXR1Q6PIV2 292 aa10.56□□□□□ -0.72
LTN1-206ENST00000486427 PRIMPOLQ96LW4 560 aa10.56□□□□□ -0.72
LTN1-206ENST00000486427 PHACTR1Q9C0D0 580 aa10.56□□□□□ -0.72
LTN1-206ENST00000486427 PRMT3O60678 531 aa10.55□□□□□ -0.72
LTN1-206ENST00000486427 PPP1R15AO75807 674 aaPredicted RBP10.55□□□□□ -0.72
LTN1-206ENST00000486427 LORP23490 312 aaPredicted RBP10.55□□□□□ -0.72
LTN1-206ENST00000486427 BICDL1Q6ZP65 573 aa10.55□□□□□ -0.72
LTN1-206ENST00000486427 ZCCHC2Q9C0B9 1178 aaKnown RBP10.55□□□□□ -0.72
LTN1-206ENST00000486427 SLAIN2Q9P270 581 aa10.55□□□□□ -0.72
LTN1-206ENST00000486427 OCLNQ16625 522 aa10.54□□□□□ -0.72
LTN1-206ENST00000486427 C1orf53Q5VUE5 145 aa10.54□□□□□ -0.72
LTN1-206ENST00000486427 NLRP8Q86W28 1048 aa10.54□□□□□ -0.72
LTN1-206ENST00000486427 TRERF1Q96PN7 1200 aa10.54□□□□□ -0.72
LTN1-206ENST00000486427 NDFIP2Q9NV92 336 aa10.54□□□□□ -0.72
LTN1-206ENST00000486427 BNIP3LO60238 219 aa10.53□□□□□ -0.72
LTN1-206ENST00000486427 ALDH16A1Q8IZ83 802 aa10.53□□□□□ -0.72
LTN1-206ENST00000486427 RHPN1Q8TCX5 695 aa10.53□□□□□ -0.72
LTN1-206ENST00000486427 ABHD17AQ96GS6 310 aa10.53□□□□□ -0.72
LTN1-206ENST00000486427 NGLY1Q96IV0 654 aa10.53□□□□□ -0.72
LTN1-206ENST00000486427 HCN2Q9UL51 889 aa10.53□□□□□ -0.72
LTN1-206ENST00000486427 FKBP5Q13451 457 aaPredicted RBP10.52□□□□□ -0.73
LTN1-206ENST00000486427 LRRC69Q6ZNQ3 347 aa10.52□□□□□ -0.73
LTN1-206ENST00000486427 CFHR5Q9BXR6 569 aa10.52□□□□□ -0.73
LTN1-206ENST00000486427 FOXO3O43524 673 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms