RNA–Protein interactions for RNA: ENST00000486344.5

SHISA5-214, Transcript of shisa family member 5, humanhuman

TSL 2

Gene SHISA5, Length 713 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-214ENST00000486344 CHMP4AQ9BY43 222 aa23.31■■□□□ 1.32
SHISA5-214ENST00000486344 CCDC87Q9NVE4 849 aa23.31■■□□□ 1.32
SHISA5-214ENST00000486344 SOS1Q07889 1333 aaPredicted RBP23.31■■□□□ 1.32
SHISA5-214ENST00000486344 FANCIQ9NVI1 1328 aa23.31■■□□□ 1.32
SHISA5-214ENST00000486344 COL5A3P25940 1745 aaPredicted RBP23.3■■□□□ 1.32
SHISA5-214ENST00000486344 PRAMEF22A3QJZ6 481 aa23.3■■□□□ 1.32
SHISA5-214ENST00000486344 INTS5Q6P9B9 1019 aaKnown RBP23.3■■□□□ 1.32
SHISA5-214ENST00000486344 ZBED9Q6R2W3 1325 aa23.3■■□□□ 1.32
SHISA5-214ENST00000486344 GNPATO15228 680 aa23.29■■□□□ 1.32
SHISA5-214ENST00000486344 RPS6KA4O75676 772 aa23.29■■□□□ 1.32
SHISA5-214ENST00000486344 DUSP27Q5VZP5 1158 aa23.29■■□□□ 1.32
SHISA5-214ENST00000486344 FLAD1Q8NFF5 587 aa23.29■■□□□ 1.32
SHISA5-214ENST00000486344 RTCBQ9Y3I0 505 aaKnown RBP23.29■■□□□ 1.32
SHISA5-214ENST00000486344 KRT24Q2M2I5 525 aa23.28■■□□□ 1.32
SHISA5-214ENST00000486344 C8orf58Q8NAV2 365 aa23.27■■□□□ 1.32
SHISA5-214ENST00000486344 MYH14Q7Z406 1995 aaKnown RBP23.27■■□□□ 1.32
SHISA5-214ENST00000486344 A1BGP04217 495 aa23.26■■□□□ 1.31
SHISA5-214ENST00000486344 EIF2S2P20042 333 aaKnown RBP23.26■■□□□ 1.31
SHISA5-214ENST00000486344 SSFA2P28290 1259 aa23.26■■□□□ 1.31
SHISA5-214ENST00000486344 R3HDM1Q15032 1099 aaKnown RBP23.26■■□□□ 1.31
SHISA5-214ENST00000486344 TRMT2AQ8IZ69 625 aaKnown RBP23.26■■□□□ 1.31
SHISA5-214ENST00000486344 CDCA7LQ96GN5 454 aa23.26■■□□□ 1.31
SHISA5-214ENST00000486344 ELL2O00472 640 aaPredicted RBP23.25■■□□□ 1.31
SHISA5-214ENST00000486344 ADRA2BP18089 450 aa23.25■■□□□ 1.31
SHISA5-214ENST00000486344 ZBTB1Q9Y2K1 713 aa23.25■■□□□ 1.31
SHISA5-214ENST00000486344 ERBB4Q15303 1308 aa23.25■■□□□ 1.31
SHISA5-214ENST00000486344 CANXP27824 592 aaKnown RBP23.24■■□□□ 1.31
SHISA5-214ENST00000486344 EXOSC9Q06265 439 aaKnown RBP23.24■■□□□ 1.31
SHISA5-214ENST00000486344 TRAPPC3LQ5T215 181 aa23.24■■□□□ 1.31
SHISA5-214ENST00000486344 NPM2Q86SE8 214 aaKnown RBP23.24■■□□□ 1.31
SHISA5-214ENST00000486344 LAMB4A4D0S4 1761 aa23.23■■□□□ 1.31
SHISA5-214ENST00000486344 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.23■■□□□ 1.31
SHISA5-214ENST00000486344 IL6STP40189 918 aaPredicted RBP23.23■■□□□ 1.31
SHISA5-214ENST00000486344 TWISTNBQ3B726 338 aaPredicted RBP23.23■■□□□ 1.31
SHISA5-214ENST00000486344 TSPYL6Q8N831 410 aa23.23■■□□□ 1.31
SHISA5-214ENST00000486344 HDGFL1Q5TGJ6 251 aa23.22■■□□□ 1.31
SHISA5-214ENST00000486344 PNPLA7Q6ZV29 1317 aa23.22■■□□□ 1.31
SHISA5-214ENST00000486344 UBR3Q6ZT12 1888 aa23.22■■□□□ 1.31
SHISA5-214ENST00000486344 A0A087WZG4 1122 aa23.21■■□□□ 1.31
SHISA5-214ENST00000486344 PSDA5PKW4 1024 aaPredicted RBP23.21■■□□□ 1.31
SHISA5-214ENST00000486344 PHF14O94880 888 aa23.21■■□□□ 1.31
SHISA5-214ENST00000486344 EIF5P55010 431 aaKnown RBP23.21■■□□□ 1.31
SHISA5-214ENST00000486344 QSER1Q2KHR3 1735 aa23.21■■□□□ 1.31
SHISA5-214ENST00000486344 NBPF26B4DH59 902 aa23.2■■□□□ 1.3
SHISA5-214ENST00000486344 VAMP4O75379 141 aa23.2■■□□□ 1.3
SHISA5-214ENST00000486344 CCDC30Q5VVM6 783 aa23.2■■□□□ 1.3
SHISA5-214ENST00000486344 NBPF10Q6P3W6 841 aaKnown RBP23.2■■□□□ 1.3
SHISA5-214ENST00000486344 COL23A1Q86Y22 540 aaPredicted RBP23.2■■□□□ 1.3
SHISA5-214ENST00000486344 NBPF15Q8N660 670 aa23.2■■□□□ 1.3
SHISA5-214ENST00000486344 AMIGO3Q86WK7 504 aa23.19■■□□□ 1.3
SHISA5-214ENST00000486344 SLC16A10Q8TF71 515 aa23.19■■□□□ 1.3
SHISA5-214ENST00000486344 NECTIN2Q92692 538 aa23.19■■□□□ 1.3
SHISA5-214ENST00000486344 ARHGEF1Q92888 912 aaKnown RBP23.19■■□□□ 1.3
SHISA5-214ENST00000486344 DDX21Q9NR30 783 aaKnown RBP eCLIP23.19■■□□□ 1.3
SHISA5-214ENST00000486344 DBF4Q9UBU7 674 aaPredicted RBP23.19■■□□□ 1.3
SHISA5-214ENST00000486344 MSH5O43196 834 aa23.18■■□□□ 1.3
SHISA5-214ENST00000486344 RFC4P35249 363 aa23.18■■□□□ 1.3
SHISA5-214ENST00000486344 PIP4K2AP48426 406 aaPredicted RBP23.17■■□□□ 1.3
SHISA5-214ENST00000486344 PDIA6Q15084 440 aa23.17■■□□□ 1.3
SHISA5-214ENST00000486344 SMIM5Q71RC9 77 aa23.17■■□□□ 1.3
SHISA5-214ENST00000486344 TUBGCP6Q96RT7 1819 aa23.17■■□□□ 1.3
SHISA5-214ENST00000486344 COL15A1P39059 1388 aa23.16■■□□□ 1.3
SHISA5-214ENST00000486344 CT47B1P0C2W7 299 aaPredicted RBP23.16■■□□□ 1.3
SHISA5-214ENST00000486344 ZNF330Q9Y3S2 320 aaPredicted RBP23.16■■□□□ 1.3
SHISA5-214ENST00000486344 MYL6BP14649 208 aa23.15■■□□□ 1.3
SHISA5-214ENST00000486344 ZNF428Q96B54 188 aa23.15■■□□□ 1.3
SHISA5-214ENST00000486344 STK31Q9BXU1 1019 aa23.15■■□□□ 1.3
SHISA5-214ENST00000486344 HYPKQ9NX55 129 aa23.15■■□□□ 1.3
SHISA5-214ENST00000486344 CHPF2Q9P2E5 772 aa23.15■■□□□ 1.3
SHISA5-214ENST00000486344 ZPR1O75312 459 aa23.14■■□□□ 1.29
SHISA5-214ENST00000486344 YTHDC1Q96MU7 727 aaKnown RBP23.14■■□□□ 1.29
SHISA5-214ENST00000486344 PDGFDQ9GZP0 370 aaPredicted RBP23.14■■□□□ 1.29
SHISA5-214ENST00000486344 NARFQ9UHQ1 456 aa23.14■■□□□ 1.29
SHISA5-214ENST00000486344 ARXQ96QS3 562 aa23.13■■□□□ 1.29
SHISA5-214ENST00000486344 LRP10Q7Z4F1 713 aa23.12■■□□□ 1.29
SHISA5-214ENST00000486344 DZIP3Q86Y13 1208 aaKnown RBP23.12■■□□□ 1.29
SHISA5-214ENST00000486344 USP42Q9H9J4 1324 aaKnown RBP23.11■■□□□ 1.29
SHISA5-214ENST00000486344 PROSER3Q2NL68 480 aa23.11■■□□□ 1.29
SHISA5-214ENST00000486344 TBC1D2BQ9UPU7 963 aa23.11■■□□□ 1.29
SHISA5-214ENST00000486344 ANXA1P04083 346 aa23.1■■□□□ 1.29
SHISA5-214ENST00000486344 NLGN1Q8N2Q7 840 aa23.1■■□□□ 1.29
SHISA5-214ENST00000486344 MTFR1LQ9H019 292 aa23.1■■□□□ 1.29
SHISA5-214ENST00000486344 CASZ1Q86V15 1759 aa23.09■■□□□ 1.29
SHISA5-214ENST00000486344 RGL2O15211 777 aa23.09■■□□□ 1.29
SHISA5-214ENST00000486344 SLC4A2P04920 1241 aa23.09■■□□□ 1.29
SHISA5-214ENST00000486344 KIF6Q6ZMV9 814 aa23.09■■□□□ 1.29
SHISA5-214ENST00000486344 COPS6Q7L5N1 327 aa23.09■■□□□ 1.29
SHISA5-214ENST00000486344 ERVV-1B6SEH8 477 aa23.08■■□□□ 1.29
SHISA5-214ENST00000486344 GYS1P13807 737 aa23.08■■□□□ 1.29
SHISA5-214ENST00000486344 USPL1Q5W0Q7 1092 aa23.08■■□□□ 1.29
SHISA5-214ENST00000486344 SRP68Q9UHB9 627 aaKnown RBP23.08■■□□□ 1.29
SHISA5-214ENST00000486344 CACNA1FO60840 1977 aa23.08■■□□□ 1.29
SHISA5-214ENST00000486344 TCERG1O14776 1098 aaKnown RBP23.07■■□□□ 1.28
SHISA5-214ENST00000486344 CAMTA2O94983 1202 aa23.07■■□□□ 1.28
SHISA5-214ENST00000486344 ZBTB7AO95365 584 aa23.07■■□□□ 1.28
SHISA5-214ENST00000486344 AIMP1Q12904 312 aaKnown RBP23.07■■□□□ 1.28
SHISA5-214ENST00000486344 CLEC4GQ6UXB4 293 aa23.07■■□□□ 1.28
SHISA5-214ENST00000486344 XAGE3Q8WTP9 111 aa23.07■■□□□ 1.28
SHISA5-214ENST00000486344 C4AP0C0L4 1744 aa23.07■■□□□ 1.28
SHISA5-214ENST00000486344 ALDH1L2Q3SY69 923 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms