RNA–Protein interactions for RNA: ENST00000486229.5

NBPF3-212, Transcript of NBPF member 3, humanhuman

TSL 3

Gene NBPF3, Length 933 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3-212ENST00000486229 ITPK1Q13572 414 aa29.44■■■□□ 2.3
NBPF3-212ENST00000486229 DUSP27Q5VZP5 1158 aa29.44■■■□□ 2.3
NBPF3-212ENST00000486229 AK7Q96M32 723 aa29.44■■■□□ 2.3
NBPF3-212ENST00000486229 STK32BQ9NY57 414 aa29.44■■■□□ 2.3
NBPF3-212ENST00000486229 NPM2Q86SE8 214 aaKnown RBP29.43■■■□□ 2.3
NBPF3-212ENST00000486229 YTHDC1Q96MU7 727 aaKnown RBP29.43■■■□□ 2.3
NBPF3-212ENST00000486229 ERBB4Q15303 1308 aa29.43■■■□□ 2.3
NBPF3-212ENST00000486229 C4BP0C0L5 1744 aa29.42■■■□□ 2.3
NBPF3-212ENST00000486229 CT47B1P0C2W7 299 aaPredicted RBP29.42■■■□□ 2.3
NBPF3-212ENST00000486229 CYP19A1P11511 503 aaPredicted RBP29.42■■■□□ 2.3
NBPF3-212ENST00000486229 TRMT2AQ8IZ69 625 aaKnown RBP29.42■■■□□ 2.3
NBPF3-212ENST00000486229 SPINK5Q9NQ38 1064 aaPredicted RBP29.42■■■□□ 2.3
NBPF3-212ENST00000486229 TWISTNBQ3B726 338 aaPredicted RBP29.41■■■□□ 2.3
NBPF3-212ENST00000486229 LINC00116Q8NCU8 138 aa29.41■■■□□ 2.3
NBPF3-212ENST00000486229 CDCA7LQ96GN5 454 aa29.41■■■□□ 2.3
NBPF3-212ENST00000486229 ANO8Q9HCE9 1232 aaPredicted RBP29.41■■■□□ 2.3
NBPF3-212ENST00000486229 CCDC87Q9NVE4 849 aa29.41■■■□□ 2.3
NBPF3-212ENST00000486229 DCAF8L1A6NGE4 600 aa29.4■■■□□ 2.3
NBPF3-212ENST00000486229 KCNQ4P56696 695 aa29.4■■■□□ 2.3
NBPF3-212ENST00000486229 ZNF428Q96B54 188 aa29.4■■■□□ 2.3
NBPF3-212ENST00000486229 CRKLP46109 303 aaKnown RBP29.39■■■□□ 2.3
NBPF3-212ENST00000486229 EXOSC9Q06265 439 aaKnown RBP29.39■■■□□ 2.3
NBPF3-212ENST00000486229 FLAD1Q8NFF5 587 aa29.39■■■□□ 2.3
NBPF3-212ENST00000486229 USP16Q9Y5T5 823 aa29.39■■■□□ 2.3
NBPF3-212ENST00000486229 HDGFL1Q5TGJ6 251 aa29.38■■■□□ 2.29
NBPF3-212ENST00000486229 CCDC30Q5VVM6 783 aa29.38■■■□□ 2.29
NBPF3-212ENST00000486229 C8orf58Q8NAV2 365 aa29.37■■■□□ 2.29
NBPF3-212ENST00000486229 RTCBQ9Y3I0 505 aaKnown RBP29.37■■■□□ 2.29
NBPF3-212ENST00000486229 EIF2S2P20042 333 aaKnown RBP29.36■■■□□ 2.29
NBPF3-212ENST00000486229 SLC15A2Q16348 729 aa29.36■■■□□ 2.29
NBPF3-212ENST00000486229 PDGFDQ9GZP0 370 aaPredicted RBP29.36■■■□□ 2.29
NBPF3-212ENST00000486229 TFCP2L1Q9NZI6 479 aa29.36■■■□□ 2.29
NBPF3-212ENST00000486229 ELL2O00472 640 aaPredicted RBP29.35■■■□□ 2.29
NBPF3-212ENST00000486229 ADRA2BP18089 450 aa29.35■■■□□ 2.29
NBPF3-212ENST00000486229 AKT1S1Q96B36 256 aa29.35■■■□□ 2.29
NBPF3-212ENST00000486229 STK31Q9BXU1 1019 aa29.35■■■□□ 2.29
NBPF3-212ENST00000486229 CHD4Q14839 1912 aa29.35■■■□□ 2.29
NBPF3-212ENST00000486229 CACNA1FO60840 1977 aa29.35■■■□□ 2.29
NBPF3-212ENST00000486229 GNPATO15228 680 aa29.34■■■□□ 2.29
NBPF3-212ENST00000486229 RPS6KA4O75676 772 aa29.34■■■□□ 2.29
NBPF3-212ENST00000486229 IL6STP40189 918 aaPredicted RBP29.34■■■□□ 2.29
NBPF3-212ENST00000486229 PTGER2P43116 358 aa29.34■■■□□ 2.29
NBPF3-212ENST00000486229 KRT24Q2M2I5 525 aa29.34■■■□□ 2.29
NBPF3-212ENST00000486229 A0A087WZG4 1122 aa29.33■■■□□ 2.29
NBPF3-212ENST00000486229 PRAMEF22A3QJZ6 481 aa29.33■■■□□ 2.29
NBPF3-212ENST00000486229 SSFA2P28290 1259 aa29.33■■■□□ 2.29
NBPF3-212ENST00000486229 DBF4Q9UBU7 674 aaPredicted RBP29.33■■■□□ 2.29
NBPF3-212ENST00000486229 QSER1Q2KHR3 1735 aa29.33■■■□□ 2.29
NBPF3-212ENST00000486229 MYH14Q7Z406 1995 aaKnown RBP29.32■■■□□ 2.28
NBPF3-212ENST00000486229 INTS5Q6P9B9 1019 aaKnown RBP29.32■■■□□ 2.28
NBPF3-212ENST00000486229 ZNF784Q8NCA9 323 aaPredicted RBP29.32■■■□□ 2.28
NBPF3-212ENST00000486229 VAMP4O75379 141 aa29.31■■■□□ 2.28
NBPF3-212ENST00000486229 TSPYL6Q8N831 410 aa29.31■■■□□ 2.28
NBPF3-212ENST00000486229 UBR3Q6ZT12 1888 aa29.3■■■□□ 2.28
NBPF3-212ENST00000486229 A1BGP04217 495 aa29.3■■■□□ 2.28
NBPF3-212ENST00000486229 CANXP27824 592 aaKnown RBP29.3■■■□□ 2.28
NBPF3-212ENST00000486229 TRAPPC3LQ5T215 181 aa29.3■■■□□ 2.28
NBPF3-212ENST00000486229 DDX21Q9NR30 783 aaKnown RBP eCLIP29.3■■■□□ 2.28
NBPF3-212ENST00000486229 ZBTB1Q9Y2K1 713 aa29.3■■■□□ 2.28
NBPF3-212ENST00000486229 HYPKQ9NX55 129 aa29.29■■■□□ 2.28
NBPF3-212ENST00000486229 ZNF827Q17R98 1081 aa29.28■■■□□ 2.28
NBPF3-212ENST00000486229 EIF5P55010 431 aaKnown RBP29.26■■■□□ 2.27
NBPF3-212ENST00000486229 ZBTB7AO95365 584 aa29.25■■■□□ 2.27
NBPF3-212ENST00000486229 NECTIN2Q92692 538 aa29.25■■■□□ 2.27
NBPF3-212ENST00000486229 COL15A1P39059 1388 aa29.25■■■□□ 2.27
NBPF3-212ENST00000486229 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.24■■■□□ 2.27
NBPF3-212ENST00000486229 RFC4P35249 363 aa29.24■■■□□ 2.27
NBPF3-212ENST00000486229 ALDH1L2Q3SY69 923 aa29.24■■■□□ 2.27
NBPF3-212ENST00000486229 CHPF2Q9P2E5 772 aa29.24■■■□□ 2.27
NBPF3-212ENST00000486229 ZNF330Q9Y3S2 320 aaPredicted RBP29.24■■■□□ 2.27
NBPF3-212ENST00000486229 MYL6BP14649 208 aa29.23■■■□□ 2.27
NBPF3-212ENST00000486229 SGIP1Q9BQI5 828 aa29.23■■■□□ 2.27
NBPF3-212ENST00000486229 NBPF26B4DH59 902 aa29.22■■■□□ 2.27
NBPF3-212ENST00000486229 PHF14O94880 888 aa29.22■■■□□ 2.27
NBPF3-212ENST00000486229 NBPF10Q6P3W6 841 aaKnown RBP29.22■■■□□ 2.27
NBPF3-212ENST00000486229 NBPF15Q8N660 670 aa29.22■■■□□ 2.27
NBPF3-212ENST00000486229 TUBGCP6Q96RT7 1819 aa29.22■■■□□ 2.27
NBPF3-212ENST00000486229 RGL2O15211 777 aa29.21■■■□□ 2.27
NBPF3-212ENST00000486229 MSH5O43196 834 aa29.21■■■□□ 2.27
NBPF3-212ENST00000486229 ZPR1O75312 459 aa29.21■■■□□ 2.27
NBPF3-212ENST00000486229 KIF6Q6ZMV9 814 aa29.21■■■□□ 2.27
NBPF3-212ENST00000486229 SLC16A10Q8TF71 515 aa29.21■■■□□ 2.27
NBPF3-212ENST00000486229 SYT17Q9BSW7 474 aa29.21■■■□□ 2.27
NBPF3-212ENST00000486229 PNPLA7Q6ZV29 1317 aa29.2■■■□□ 2.26
NBPF3-212ENST00000486229 DDX58O95786 925 aaKnown RBP29.19■■■□□ 2.26
NBPF3-212ENST00000486229 SLC4A2P04920 1241 aa29.19■■■□□ 2.26
NBPF3-212ENST00000486229 PDIA6Q15084 440 aa29.19■■■□□ 2.26
NBPF3-212ENST00000486229 ARXQ96QS3 562 aa29.19■■■□□ 2.26
NBPF3-212ENST00000486229 ATF5Q9Y2D1 282 aaPredicted RBP29.19■■■□□ 2.26
NBPF3-212ENST00000486229 DZIP3Q86Y13 1208 aaKnown RBP29.18■■■□□ 2.26
NBPF3-212ENST00000486229 ARHGEF1Q92888 912 aaKnown RBP29.18■■■□□ 2.26
NBPF3-212ENST00000486229 FHDC1Q9C0D6 1143 aaPredicted RBP29.18■■■□□ 2.26
NBPF3-212ENST00000486229 NARFQ9UHQ1 456 aa29.17■■■□□ 2.26
NBPF3-212ENST00000486229 ZNF652Q9Y2D9 606 aa29.17■■■□□ 2.26
NBPF3-212ENST00000486229 PIP4K2AP48426 406 aaPredicted RBP29.16■■■□□ 2.26
NBPF3-212ENST00000486229 COL23A1Q86Y22 540 aaPredicted RBP29.16■■■□□ 2.26
NBPF3-212ENST00000486229 C4AP0C0L4 1744 aa29.15■■■□□ 2.26
NBPF3-212ENST00000486229 SMC4Q9NTJ3 1288 aa29.15■■■□□ 2.26
NBPF3-212ENST00000486229 ERVV-1B6SEH8 477 aa29.14■■■□□ 2.26
NBPF3-212ENST00000486229 PROSER3Q2NL68 480 aa29.14■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms