RNA–Protein interactions for RNA: ENST00000485680.1

SPTA1-207, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 422 nt, Biotype processed transcript, Subcellular localisation Cytosol, Dendrite .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-207ENST00000485680 KRTAP1-3Q8IUG1 177 aa8.43□□□□□ -1.06
SPTA1-207ENST00000485680 GOLGA6L1Q8N7Z2 621 aa8.43□□□□□ -1.06
SPTA1-207ENST00000485680 PLPP7Q8NBV4 271 aa8.43□□□□□ -1.06
SPTA1-207ENST00000485680 CCDC85AQ96PX6 553 aaPredicted RBP8.43□□□□□ -1.06
SPTA1-207ENST00000485680 PHF24Q9UPV7 400 aa8.43□□□□□ -1.06
SPTA1-207ENST00000485680 C2CD2LO14523 706 aa8.42□□□□□ -1.06
SPTA1-207ENST00000485680 SCTRP47872 440 aa8.42□□□□□ -1.06
SPTA1-207ENST00000485680 NCOA4Q13772 614 aa8.42□□□□□ -1.06
SPTA1-207ENST00000485680 KANK4Q5T7N3 995 aaPredicted RBP8.42□□□□□ -1.06
SPTA1-207ENST00000485680 ACIN1Q9UKV3 1341 aaKnown RBP8.41□□□□□ -1.06
SPTA1-207ENST00000485680 PDIA4P13667 645 aaKnown RBP8.41□□□□□ -1.06
SPTA1-207ENST00000485680 CYP2U1Q7Z449 544 aa8.41□□□□□ -1.06
SPTA1-207ENST00000485680 PLEKHM2Q8IWE5 1019 aa8.41□□□□□ -1.06
SPTA1-207ENST00000485680 ARHGEF10LQ9HCE6 1279 aa8.41□□□□□ -1.06
SPTA1-207ENST00000485680 GPAMQ9HCL2 828 aa8.41□□□□□ -1.06
SPTA1-207ENST00000485680 CHIC2Q9UKJ5 165 aa8.41□□□□□ -1.06
SPTA1-207ENST00000485680 CARNS1A5YM72 827 aa8.4□□□□□ -1.06
SPTA1-207ENST00000485680 CHRNA4P43681 627 aa8.4□□□□□ -1.06
SPTA1-207ENST00000485680 BTBD6Q96KE9 485 aa8.4□□□□□ -1.06
SPTA1-207ENST00000485680 OSBPL3Q9H4L5 887 aa8.4□□□□□ -1.06
SPTA1-207ENST00000485680 VRTNQ9H8Y1 702 aa8.4□□□□□ -1.06
SPTA1-207ENST00000485680 GNB5O14775 395 aa8.39□□□□□ -1.07
SPTA1-207ENST00000485680 AMPD1P23109 780 aa8.39□□□□□ -1.07
SPTA1-207ENST00000485680 SLCO4C1Q6ZQN7 724 aa8.39□□□□□ -1.07
SPTA1-207ENST00000485680 SEMA6BQ9H3T3 888 aa8.39□□□□□ -1.07
SPTA1-207ENST00000485680 MKRN1Q9UHC7 482 aaKnown RBP8.39□□□□□ -1.07
SPTA1-207ENST00000485680 GGA1Q9UJY5 639 aa8.39□□□□□ -1.07
SPTA1-207ENST00000485680 DOLKQ9UPQ8 538 aa8.39□□□□□ -1.07
SPTA1-207ENST00000485680 PIK3R2O00459 728 aa8.38□□□□□ -1.07
SPTA1-207ENST00000485680 ATG7O95352 703 aa8.38□□□□□ -1.07
SPTA1-207ENST00000485680 CENPCQ03188 943 aa8.38□□□□□ -1.07
SPTA1-207ENST00000485680 LBRQ14739 615 aaKnown RBP8.38□□□□□ -1.07
SPTA1-207ENST00000485680 OXLD1Q5BKU9 147 aa8.38□□□□□ -1.07
SPTA1-207ENST00000485680 RNF20Q5VTR2 975 aa8.38□□□□□ -1.07
SPTA1-207ENST00000485680 CDCA7Q9BWT1 371 aaPredicted RBP8.38□□□□□ -1.07
SPTA1-207ENST00000485680 A0A1B0GTH6 734 aa8.37□□□□□ -1.07
SPTA1-207ENST00000485680 BMP4P12644 408 aa8.37□□□□□ -1.07
SPTA1-207ENST00000485680 PHKA2P46019 1235 aa8.37□□□□□ -1.07
SPTA1-207ENST00000485680 CTBSQ01459 385 aa8.37□□□□□ -1.07
SPTA1-207ENST00000485680 DOC2BQ14184 412 aa8.37□□□□□ -1.07
SPTA1-207ENST00000485680 MAP7D1Q3KQU3 841 aa8.37□□□□□ -1.07
SPTA1-207ENST00000485680 NDFIP2Q9NV92 336 aa8.37□□□□□ -1.07
SPTA1-207ENST00000485680 ATXN7L1Q9ULK2 861 aaPredicted RBP8.37□□□□□ -1.07
SPTA1-207ENST00000485680 EPXP11678 715 aa8.36□□□□□ -1.07
SPTA1-207ENST00000485680 DGKGP49619 791 aa8.36□□□□□ -1.07
SPTA1-207ENST00000485680 EML3Q32P44 896 aa8.36□□□□□ -1.07
SPTA1-207ENST00000485680 CRTC2Q53ET0 693 aaPredicted RBP8.36□□□□□ -1.07
SPTA1-207ENST00000485680 ZMYM1Q5SVZ6 1142 aa8.36□□□□□ -1.07
SPTA1-207ENST00000485680 CNKSR1Q969H4 720 aa8.36□□□□□ -1.07
SPTA1-207ENST00000485680 ESYT1Q9BSJ8 1104 aa8.36□□□□□ -1.07
SPTA1-207ENST00000485680 TRAIPQ9BWF2 469 aa8.36□□□□□ -1.07
SPTA1-207ENST00000485680 PCDHB11Q9Y5F2 797 aa8.36□□□□□ -1.07
SPTA1-207ENST00000485680 HRH3Q9Y5N1 445 aa8.36□□□□□ -1.07
SPTA1-207ENST00000485680 IL2RAP01589 272 aa8.35□□□□□ -1.07
SPTA1-207ENST00000485680 CSB-PGBD3P0DP91 1061 aa8.35□□□□□ -1.07
SPTA1-207ENST00000485680 TRIM26Q12899 539 aaPredicted RBP8.35□□□□□ -1.07
SPTA1-207ENST00000485680 ABHD17AQ96GS6 310 aa8.35□□□□□ -1.07
SPTA1-207ENST00000485680 RUBCNLQ9H714 662 aa8.35□□□□□ -1.07
SPTA1-207ENST00000485680 RAB6BQ9NRW1 208 aa8.35□□□□□ -1.07
SPTA1-207ENST00000485680 ZMIZ1Q9ULJ6 1067 aa8.35□□□□□ -1.07
SPTA1-207ENST00000485680 USP17L15C9J2P7 530 aa8.34□□□□□ -1.07
SPTA1-207ENST00000485680 USP17L10C9JJH3 530 aa8.34□□□□□ -1.07
SPTA1-207ENST00000485680 USP17L13C9JLJ4 530 aa8.34□□□□□ -1.07
SPTA1-207ENST00000485680 USP17L12C9JPN9 530 aa8.34□□□□□ -1.07
SPTA1-207ENST00000485680 USP17L11C9JVI0 530 aa8.34□□□□□ -1.07
SPTA1-207ENST00000485680 USP17L21D6R901 530 aa8.34□□□□□ -1.07
SPTA1-207ENST00000485680 USP17L18D6R9N7 530 aa8.34□□□□□ -1.07
SPTA1-207ENST00000485680 USP17L22D6RA61 530 aa8.34□□□□□ -1.07
SPTA1-207ENST00000485680 USP17L17D6RBQ6 530 aa8.34□□□□□ -1.07
SPTA1-207ENST00000485680 USP17L19D6RCP7 530 aa8.34□□□□□ -1.07
SPTA1-207ENST00000485680 USP17L20D6RJB6 530 aa8.34□□□□□ -1.07
SPTA1-207ENST00000485680 BNIP3LO60238 219 aa8.34□□□□□ -1.07
SPTA1-207ENST00000485680 GNRH1P01148 92 aa8.34□□□□□ -1.07
SPTA1-207ENST00000485680 RASA1P20936 1047 aa8.34□□□□□ -1.07
SPTA1-207ENST00000485680 FGFR3P22607 806 aa8.34□□□□□ -1.07
SPTA1-207ENST00000485680 CLDN10P78369 228 aa8.34□□□□□ -1.07
SPTA1-207ENST00000485680 USP17L24Q0WX57 530 aa8.34□□□□□ -1.07
SPTA1-207ENST00000485680 STK32AQ8WU08 396 aa8.34□□□□□ -1.07
SPTA1-207ENST00000485680 NOP53Q9NZM5 478 aaKnown RBP8.34□□□□□ -1.07
SPTA1-207ENST00000485680 FAM196BA6NMK8 535 aa8.33□□□□□ -1.08
SPTA1-207ENST00000485680 LZTS3O60299 673 aaPredicted RBP8.33□□□□□ -1.08
SPTA1-207ENST00000485680 MSX1P28360 303 aa8.33□□□□□ -1.08
SPTA1-207ENST00000485680 PTK7Q13308 1070 aa8.33□□□□□ -1.08
SPTA1-207ENST00000485680 PGBD3Q8N328 593 aa8.33□□□□□ -1.08
SPTA1-207ENST00000485680 ZSCAN10Q96SZ4 725 aaPredicted RBP8.33□□□□□ -1.08
SPTA1-207ENST00000485680 NOVA2Q9UNW9 492 aaKnown RBP8.33□□□□□ -1.08
SPTA1-207ENST00000485680 TMEM88BA6NKF7 163 aa8.32□□□□□ -1.08
SPTA1-207ENST00000485680 ARAFP10398 606 aa8.32□□□□□ -1.08
SPTA1-207ENST00000485680 C4orf17Q53FE4 359 aa8.32□□□□□ -1.08
SPTA1-207ENST00000485680 LARP1Q6PKG0 1096 aaKnown RBP8.32□□□□□ -1.08
SPTA1-207ENST00000485680 OGFOD1Q8N543 542 aa8.32□□□□□ -1.08
SPTA1-207ENST00000485680 XAGE2Q96GT9 111 aa8.32□□□□□ -1.08
SPTA1-207ENST00000485680 ZNF594Q96JF6 807 aaPredicted RBP8.32□□□□□ -1.08
SPTA1-207ENST00000485680 KRTAP4-12Q9BQ66 201 aa8.32□□□□□ -1.08
SPTA1-207ENST00000485680 FHDC1Q9C0D6 1143 aaPredicted RBP8.32□□□□□ -1.08
SPTA1-207ENST00000485680 KIAA1024Q9UPX6 916 aa8.32□□□□□ -1.08
SPTA1-207ENST00000485680 NOD1Q9Y239 953 aa8.32□□□□□ -1.08
SPTA1-207ENST00000485680 USTQ9Y2C2 406 aa8.32□□□□□ -1.08
SPTA1-207ENST00000485680 GTF2IP78347 998 aa8.31□□□□□ -1.08
SPTA1-207ENST00000485680 EFHC2Q5JST6 749 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms