RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-223ENST00000485024 COL9A3Q14050 684 aaPredicted RBP9.14□□□□□ -0.95
VPS8-223ENST00000485024 TRIM34Q9BYJ4 488 aa9.14□□□□□ -0.95
VPS8-223ENST00000485024 MAPTP10636 758 aaKnown RBP9.13□□□□□ -0.95
VPS8-223ENST00000485024 TNP2Q05952 138 aa9.13□□□□□ -0.95
VPS8-223ENST00000485024 ATXN7O15265 892 aaPredicted RBP9.12□□□□□ -0.95
VPS8-223ENST00000485024 ATP4AP20648 1035 aa9.12□□□□□ -0.95
VPS8-223ENST00000485024 ZNF468Q5VIY5 522 aaPredicted RBP9.12□□□□□ -0.95
VPS8-223ENST00000485024 GTF2E1P29083 439 aaPredicted RBP9.11□□□□□ -0.95
VPS8-223ENST00000485024 GRIK4Q16099 956 aa9.11□□□□□ -0.95
VPS8-223ENST00000485024 RHBDD1Q8TEB9 315 aa9.11□□□□□ -0.95
VPS8-223ENST00000485024 MDFIQ99750 246 aa9.11□□□□□ -0.95
VPS8-223ENST00000485024 KRTAP4-9Q9BYQ8 210 aa9.11□□□□□ -0.95
VPS8-223ENST00000485024 SKIV2LQ15477 1246 aaKnown RBP9.1□□□□□ -0.95
VPS8-223ENST00000485024 NLRP8Q86W28 1048 aa9.1□□□□□ -0.95
VPS8-223ENST00000485024 NACC1Q96RE7 527 aa9.09□□□□□ -0.95
VPS8-223ENST00000485024 ESF1Q9H501 851 aaKnown RBP9.09□□□□□ -0.95
VPS8-223ENST00000485024 ELOA3CA0A087WX78 387 aaPredicted RBP9.08□□□□□ -0.96
VPS8-223ENST00000485024 ELOA3DA6NLF2 546 aaPredicted RBP9.08□□□□□ -0.96
VPS8-223ENST00000485024 YBX3P16989 372 aaKnown RBP eCLIP9.08□□□□□ -0.96
VPS8-223ENST00000485024 PLA2G4AP47712 749 aa9.08□□□□□ -0.96
VPS8-223ENST00000485024 ELOA3BQ3SY89 546 aa9.08□□□□□ -0.96
VPS8-223ENST00000485024 TBC1D9Q6ZT07 1266 aa9.08□□□□□ -0.96
VPS8-223ENST00000485024 PPARGC1BQ86YN6 1023 aaKnown RBP9.08□□□□□ -0.96
VPS8-223ENST00000485024 ELOA3Q8NG57 546 aa9.08□□□□□ -0.96
VPS8-223ENST00000485024 COL17A1Q9UMD9 1497 aaPredicted RBP9.08□□□□□ -0.96
VPS8-223ENST00000485024 KHNYNO15037 678 aaKnown RBP9.07□□□□□ -0.96
VPS8-223ENST00000485024 STAU1O95793 577 aaKnown RBP9.07□□□□□ -0.96
VPS8-223ENST00000485024 FMNL2Q96PY5 1086 aa9.07□□□□□ -0.96
VPS8-223ENST00000485024 PAX4O43316 350 aa9.06□□□□□ -0.96
VPS8-223ENST00000485024 ADGRE1Q14246 886 aa9.06□□□□□ -0.96
VPS8-223ENST00000485024 MBTPS1Q14703 1052 aa9.06□□□□□ -0.96
VPS8-223ENST00000485024 M0R082 166 aa9.05□□□□□ -0.96
VPS8-223ENST00000485024 TXKP42681 527 aa9.05□□□□□ -0.96
VPS8-223ENST00000485024 TRIM28Q13263 835 aaKnown RBP9.05□□□□□ -0.96
VPS8-223ENST00000485024 C8orf86Q6ZUL3 223 aa9.05□□□□□ -0.96
VPS8-223ENST00000485024 ZNF417Q8TAU3 575 aa9.05□□□□□ -0.96
VPS8-223ENST00000485024 ZNF587Q96SQ5 575 aaPredicted RBP9.05□□□□□ -0.96
VPS8-223ENST00000485024 CDCA7Q9BWT1 371 aaPredicted RBP9.05□□□□□ -0.96
VPS8-223ENST00000485024 STRN4Q9NRL3 753 aa9.05□□□□□ -0.96
VPS8-223ENST00000485024 PRR12Q9ULL5 1215 aa9.05□□□□□ -0.96
VPS8-223ENST00000485024 SH3D19Q5HYK7 790 aa9.04□□□□□ -0.96
VPS8-223ENST00000485024 STARD13Q9Y3M8 1113 aa9.04□□□□□ -0.96
VPS8-223ENST00000485024 A0A1W2PNR3 127 aa9.03□□□□□ -0.96
VPS8-223ENST00000485024 ELNP15502 786 aa9.03□□□□□ -0.96
VPS8-223ENST00000485024 SELPP16109 830 aa9.03□□□□□ -0.96
VPS8-223ENST00000485024 PRDM6Q9NQX0 595 aa9.03□□□□□ -0.96
VPS8-223ENST00000485024 FAM157BP0CG42 384 aa9.02□□□□□ -0.97
VPS8-223ENST00000485024 NID1P14543 1247 aa9.02□□□□□ -0.97
VPS8-223ENST00000485024 ALAS2P22557 587 aa9.02□□□□□ -0.97
VPS8-223ENST00000485024 TLR1Q15399 786 aa9.02□□□□□ -0.97
VPS8-223ENST00000485024 C1orf216Q8TAB5 229 aa9.02□□□□□ -0.97
VPS8-223ENST00000485024 KRTAP4-2Q9BYR5 136 aa9.02□□□□□ -0.97
VPS8-223ENST00000485024 ETNK1Q9HBU6 452 aa9.02□□□□□ -0.97
VPS8-223ENST00000485024 ALBP02768 609 aa9.01□□□□□ -0.97
VPS8-223ENST00000485024 ESCO1Q5FWF5 840 aa9.01□□□□□ -0.97
VPS8-223ENST00000485024 TXNRD3Q86VQ6 643 aa9.01□□□□□ -0.97
VPS8-223ENST00000485024 C9orf172C9J069 976 aa9□□□□□ -0.97
VPS8-223ENST00000485024 MYCP01106 439 aaPredicted RBP9□□□□□ -0.97
VPS8-223ENST00000485024 SYT9Q86SS6 491 aa9□□□□□ -0.97
VPS8-223ENST00000485024 TP53INP1Q96A56 240 aa9□□□□□ -0.97
VPS8-223ENST00000485024 CCDC85AQ96PX6 553 aaPredicted RBP9□□□□□ -0.97
VPS8-223ENST00000485024 RNF112Q9ULX5 631 aa9□□□□□ -0.97
VPS8-223ENST00000485024 MICALL1Q8N3F8 863 aa8.99□□□□□ -0.97
VPS8-223ENST00000485024 ATP1B4Q9UN42 357 aaPredicted RBP8.99□□□□□ -0.97
VPS8-223ENST00000485024 ADARB2-AS1A8MUL3 147 aa8.98□□□□□ -0.97
VPS8-223ENST00000485024 EFSO43281 561 aa8.98□□□□□ -0.97
VPS8-223ENST00000485024 MCCD1P59942 119 aaPredicted RBP8.98□□□□□ -0.97
VPS8-223ENST00000485024 AIDAQ96BJ3 306 aa8.98□□□□□ -0.97
VPS8-223ENST00000485024 SSBP4Q9BWG4 385 aaPredicted RBP8.98□□□□□ -0.97
VPS8-223ENST00000485024 MARK1Q9P0L2 795 aa8.98□□□□□ -0.97
VPS8-223ENST00000485024 NR1H3Q13133 447 aa8.97□□□□□ -0.97
VPS8-223ENST00000485024 ARSJQ5FYB0 599 aaPredicted RBP8.97□□□□□ -0.97
VPS8-223ENST00000485024 GJD4Q96KN9 370 aaPredicted RBP8.97□□□□□ -0.97
VPS8-223ENST00000485024 RFC5P40937 340 aa8.96□□□□□ -0.98
VPS8-223ENST00000485024 FZD5Q13467 585 aa8.96□□□□□ -0.98
VPS8-223ENST00000485024 SHISA2Q6UWI4 295 aa8.96□□□□□ -0.98
VPS8-223ENST00000485024 SIN3BO75182 1162 aa8.95□□□□□ -0.98
VPS8-223ENST00000485024 ZNF295-AS1Q8N0V1 137 aa8.95□□□□□ -0.98
VPS8-223ENST00000485024 ZIC5Q96T25 663 aa8.95□□□□□ -0.98
VPS8-223ENST00000485024 NRG1Q02297 640 aaPredicted RBP8.94□□□□□ -0.98
VPS8-223ENST00000485024 LENG1Q96BZ8 264 aaPredicted RBP8.94□□□□□ -0.98
VPS8-223ENST00000485024 SAMD5Q5TGI4 173 aa8.93□□□□□ -0.98
VPS8-223ENST00000485024 VSIG10Q8N0Z9 540 aa8.93□□□□□ -0.98
VPS8-223ENST00000485024 NIFKQ9BYG3 293 aaKnown RBP8.93□□□□□ -0.98
VPS8-223ENST00000485024 A0A0A0MRY4 1105 aa8.92□□□□□ -0.98
VPS8-223ENST00000485024 LAMC2Q13753 1193 aa8.92□□□□□ -0.98
VPS8-223ENST00000485024 TRAPPC3LQ5T215 181 aa8.92□□□□□ -0.98
VPS8-223ENST00000485024 C20orf204Q6ZNR8 217 aa8.92□□□□□ -0.98
VPS8-223ENST00000485024 TNFRSF25Q93038 417 aa8.92□□□□□ -0.98
VPS8-223ENST00000485024 SLC24A3Q9HC58 644 aa8.92□□□□□ -0.98
VPS8-223ENST00000485024 PCMTD2Q9NV79 361 aa8.91□□□□□ -0.98
VPS8-223ENST00000485024 SCNN1DP51172 638 aa8.9□□□□□ -0.98
VPS8-223ENST00000485024 TSGA10IPQ3SY00 556 aa8.9□□□□□ -0.98
VPS8-223ENST00000485024 ZNF592Q92610 1267 aa8.9□□□□□ -0.98
VPS8-223ENST00000485024 GPR37L1O60883 481 aa8.89□□□□□ -0.99
VPS8-223ENST00000485024 ADH7P40394 386 aa8.89□□□□□ -0.99
VPS8-223ENST00000485024 NBPF1Q3BBV0 1214 aa8.89□□□□□ -0.99
VPS8-223ENST00000485024 SLC30A3Q99726 388 aa8.89□□□□□ -0.99
VPS8-223ENST00000485024 GJA3Q9Y6H8 435 aa8.89□□□□□ -0.99
VPS8-223ENST00000485024 ZDHHC3Q9NYG2 299 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms