RNA–Protein interactions for RNA: ENST00000484620.1

PDLIM4-207, Transcript of PDZ and LIM domain 4, humanhuman

TSL 5

Gene PDLIM4, Length 456 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-207ENST00000484620 EIF2S2P20042 333 aaKnown RBP24.51■■□□□ 1.51
PDLIM4-207ENST00000484620 KCNQ4P56696 695 aa24.51■■□□□ 1.51
PDLIM4-207ENST00000484620 HDGFL1Q5TGJ6 251 aa24.51■■□□□ 1.51
PDLIM4-207ENST00000484620 PROM2Q8N271 834 aa24.51■■□□□ 1.51
PDLIM4-207ENST00000484620 USP16Q9Y5T5 823 aa24.51■■□□□ 1.51
PDLIM4-207ENST00000484620 ZNF428Q96B54 188 aa24.5■■□□□ 1.51
PDLIM4-207ENST00000484620 LRRC4BQ9NT99 713 aa24.5■■□□□ 1.51
PDLIM4-207ENST00000484620 CYP19A1P11511 503 aaPredicted RBP24.49■■□□□ 1.51
PDLIM4-207ENST00000484620 CCDC30Q5VVM6 783 aa24.49■■□□□ 1.51
PDLIM4-207ENST00000484620 LINC00116Q8NCU8 138 aa24.49■■□□□ 1.51
PDLIM4-207ENST00000484620 ERBB4Q15303 1308 aa24.48■■□□□ 1.51
PDLIM4-207ENST00000484620 C4BP0C0L5 1744 aa24.47■■□□□ 1.51
PDLIM4-207ENST00000484620 CNTNAP4Q9C0A0 1308 aa24.47■■□□□ 1.51
PDLIM4-207ENST00000484620 CRKLP46109 303 aaKnown RBP24.46■■□□□ 1.51
PDLIM4-207ENST00000484620 NECTIN2Q92692 538 aa24.46■■□□□ 1.51
PDLIM4-207ENST00000484620 STK31Q9BXU1 1019 aa24.46■■□□□ 1.51
PDLIM4-207ENST00000484620 CCDC87Q9NVE4 849 aa24.46■■□□□ 1.51
PDLIM4-207ENST00000484620 NUP188Q5SRE5 1749 aa24.46■■□□□ 1.51
PDLIM4-207ENST00000484620 RC3H1Q5TC82 1133 aaKnown RBP24.45■■□□□ 1.5
PDLIM4-207ENST00000484620 AK7Q96M32 723 aa24.44■■□□□ 1.5
PDLIM4-207ENST00000484620 DBF4Q9UBU7 674 aaPredicted RBP24.44■■□□□ 1.5
PDLIM4-207ENST00000484620 A1BGP04217 495 aa24.43■■□□□ 1.5
PDLIM4-207ENST00000484620 ALDH1L2Q3SY69 923 aa24.43■■□□□ 1.5
PDLIM4-207ENST00000484620 CACNA1FO60840 1977 aa24.43■■□□□ 1.5
PDLIM4-207ENST00000484620 MYH14Q7Z406 1995 aaKnown RBP24.42■■□□□ 1.5
PDLIM4-207ENST00000484620 INTS5Q6P9B9 1019 aaKnown RBP24.42■■□□□ 1.5
PDLIM4-207ENST00000484620 DDX21Q9NR30 783 aaKnown RBP eCLIP24.42■■□□□ 1.5
PDLIM4-207ENST00000484620 CHPF2Q9P2E5 772 aa24.42■■□□□ 1.5
PDLIM4-207ENST00000484620 CANXP27824 592 aaKnown RBP24.41■■□□□ 1.5
PDLIM4-207ENST00000484620 NPM2Q86SE8 214 aaKnown RBP24.41■■□□□ 1.5
PDLIM4-207ENST00000484620 ZBTB1Q9Y2K1 713 aa24.41■■□□□ 1.5
PDLIM4-207ENST00000484620 GNPATO15228 680 aa24.4■■□□□ 1.5
PDLIM4-207ENST00000484620 NBPF26B4DH59 902 aa24.39■■□□□ 1.49
PDLIM4-207ENST00000484620 TCERG1O14776 1098 aaKnown RBP24.39■■□□□ 1.49
PDLIM4-207ENST00000484620 MYL6BP14649 208 aa24.39■■□□□ 1.49
PDLIM4-207ENST00000484620 IL6STP40189 918 aaPredicted RBP24.39■■□□□ 1.49
PDLIM4-207ENST00000484620 RARSP54136 660 aaKnown RBP24.39■■□□□ 1.49
PDLIM4-207ENST00000484620 NBPF14Q5TI25 921 aa24.39■■□□□ 1.49
PDLIM4-207ENST00000484620 NBPF10Q6P3W6 841 aaKnown RBP24.39■■□□□ 1.49
PDLIM4-207ENST00000484620 NBPF15Q8N660 670 aa24.39■■□□□ 1.49
PDLIM4-207ENST00000484620 SMC4Q9NTJ3 1288 aa24.39■■□□□ 1.49
PDLIM4-207ENST00000484620 HYPKQ9NX55 129 aa24.39■■□□□ 1.49
PDLIM4-207ENST00000484620 STK32BQ9NY57 414 aa24.39■■□□□ 1.49
PDLIM4-207ENST00000484620 RPS6KA4O75676 772 aa24.38■■□□□ 1.49
PDLIM4-207ENST00000484620 SLC4A2P04920 1241 aa24.38■■□□□ 1.49
PDLIM4-207ENST00000484620 PIP4K2AP48426 406 aaPredicted RBP24.38■■□□□ 1.49
PDLIM4-207ENST00000484620 PDIA6Q15084 440 aa24.38■■□□□ 1.49
PDLIM4-207ENST00000484620 SSH1Q8WYL5 1049 aa24.38■■□□□ 1.49
PDLIM4-207ENST00000484620 AKT1S1Q96B36 256 aa24.38■■□□□ 1.49
PDLIM4-207ENST00000484620 RTCBQ9Y3I0 505 aaKnown RBP24.38■■□□□ 1.49
PDLIM4-207ENST00000484620 RCAN3Q9UKA8 241 aa24.37■■□□□ 1.49
PDLIM4-207ENST00000484620 ZNF330Q9Y3S2 320 aaPredicted RBP24.37■■□□□ 1.49
PDLIM4-207ENST00000484620 UBR3Q6ZT12 1888 aa24.36■■□□□ 1.49
PDLIM4-207ENST00000484620 ANXA1P04083 346 aa24.36■■□□□ 1.49
PDLIM4-207ENST00000484620 PROSER3Q2NL68 480 aa24.36■■□□□ 1.49
PDLIM4-207ENST00000484620 CENPBP07199 599 aaPredicted RBP24.35■■□□□ 1.49
PDLIM4-207ENST00000484620 EIF5P55010 431 aaKnown RBP24.35■■□□□ 1.49
PDLIM4-207ENST00000484620 ZNF827Q17R98 1081 aa24.35■■□□□ 1.49
PDLIM4-207ENST00000484620 BCL2L13Q9BXK5 485 aa24.35■■□□□ 1.49
PDLIM4-207ENST00000484620 TFCP2L1Q9NZI6 479 aa24.35■■□□□ 1.49
PDLIM4-207ENST00000484620 COL15A1P39059 1388 aa24.34■■□□□ 1.49
PDLIM4-207ENST00000484620 A0A087WZG4 1122 aa24.34■■□□□ 1.49
PDLIM4-207ENST00000484620 ADRA2BP18089 450 aa24.34■■□□□ 1.49
PDLIM4-207ENST00000484620 SSFA2P28290 1259 aa24.34■■□□□ 1.49
PDLIM4-207ENST00000484620 SLC15A2Q16348 729 aa24.34■■□□□ 1.49
PDLIM4-207ENST00000484620 MRPL50Q8N5N7 158 aaKnown RBP24.34■■□□□ 1.49
PDLIM4-207ENST00000484620 ANO8Q9HCE9 1232 aaPredicted RBP24.33■■□□□ 1.49
PDLIM4-207ENST00000484620 BRPF1P55201 1214 aaPredicted RBP24.32■■□□□ 1.48
PDLIM4-207ENST00000484620 TRAPPC3LQ5T215 181 aa24.32■■□□□ 1.48
PDLIM4-207ENST00000484620 LRP10Q7Z4F1 713 aa24.32■■□□□ 1.48
PDLIM4-207ENST00000484620 FLAD1Q8NFF5 587 aa24.32■■□□□ 1.48
PDLIM4-207ENST00000484620 TUBGCP6Q96RT7 1819 aa24.32■■□□□ 1.48
PDLIM4-207ENST00000484620 QSER1Q2KHR3 1735 aa24.32■■□□□ 1.48
PDLIM4-207ENST00000484620 KIF16BQ96L93 1317 aa24.32■■□□□ 1.48
PDLIM4-207ENST00000484620 PHF14O94880 888 aa24.31■■□□□ 1.48
PDLIM4-207ENST00000484620 KIF6Q6ZMV9 814 aa24.31■■□□□ 1.48
PDLIM4-207ENST00000484620 XAGE3Q8WTP9 111 aa24.31■■□□□ 1.48
PDLIM4-207ENST00000484620 PHAXQ9H814 394 aaKnown RBP24.31■■□□□ 1.48
PDLIM4-207ENST00000484620 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.3■■□□□ 1.48
PDLIM4-207ENST00000484620 BCAR3O75815 825 aa24.3■■□□□ 1.48
PDLIM4-207ENST00000484620 DDX58O95786 925 aaKnown RBP24.3■■□□□ 1.48
PDLIM4-207ENST00000484620 AIMP1Q12904 312 aaKnown RBP24.3■■□□□ 1.48
PDLIM4-207ENST00000484620 FLIIQ13045 1269 aa24.3■■□□□ 1.48
PDLIM4-207ENST00000484620 COPS6Q7L5N1 327 aa24.3■■□□□ 1.48
PDLIM4-207ENST00000484620 ARXQ96QS3 562 aa24.3■■□□□ 1.48
PDLIM4-207ENST00000484620 G2E3Q7L622 706 aa24.29■■□□□ 1.48
PDLIM4-207ENST00000484620 DZIP3Q86Y13 1208 aaKnown RBP24.29■■□□□ 1.48
PDLIM4-207ENST00000484620 C4AP0C0L4 1744 aa24.28■■□□□ 1.48
PDLIM4-207ENST00000484620 RFC4P35249 363 aa24.28■■□□□ 1.48
PDLIM4-207ENST00000484620 PTPRCP08575 1304 aa24.28■■□□□ 1.48
PDLIM4-207ENST00000484620 IPO8O15397 1037 aaKnown RBP24.27■■□□□ 1.48
PDLIM4-207ENST00000484620 FKBP5Q13451 457 aaPredicted RBP24.27■■□□□ 1.48
PDLIM4-207ENST00000484620 AMIGO3Q86WK7 504 aa24.27■■□□□ 1.48
PDLIM4-207ENST00000484620 ARHGEF1Q92888 912 aaKnown RBP24.27■■□□□ 1.48
PDLIM4-207ENST00000484620 TTLL7Q6ZT98 887 aa24.26■■□□□ 1.47
PDLIM4-207ENST00000484620 TBC1D2BQ9UPU7 963 aa24.26■■□□□ 1.47
PDLIM4-207ENST00000484620 PNPLA7Q6ZV29 1317 aa24.26■■□□□ 1.47
PDLIM4-207ENST00000484620 ZPR1O75312 459 aa24.25■■□□□ 1.47
PDLIM4-207ENST00000484620 ANKRD13DQ6ZTN6 518 aa24.25■■□□□ 1.47
PDLIM4-207ENST00000484620 SMIM5Q71RC9 77 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 314.3 ms