RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-210ENST00000484596 TFIP11Q9UBB9 837 aaKnown RBP12.69□□□□□ -0.38
UBR3-210ENST00000484596 MKRN1Q9UHC7 482 aaKnown RBP12.69□□□□□ -0.38
UBR3-210ENST00000484596 PHF24Q9UPV7 400 aa12.69□□□□□ -0.38
UBR3-210ENST00000484596 CCDC102BQ68D86 513 aa12.68□□□□□ -0.38
UBR3-210ENST00000484596 OGFOD1Q8N543 542 aa12.68□□□□□ -0.38
UBR3-210ENST00000484596 ACDQ96AP0 544 aa12.68□□□□□ -0.38
UBR3-210ENST00000484596 PARP3Q9Y6F1 533 aa12.68□□□□□ -0.38
UBR3-210ENST00000484596 EPHA4P54764 986 aa12.67□□□□□ -0.38
UBR3-210ENST00000484596 MAP3K10Q02779 954 aa12.67□□□□□ -0.38
UBR3-210ENST00000484596 TNS4Q8IZW8 715 aa12.67□□□□□ -0.38
UBR3-210ENST00000484596 DNAAF2Q9NVR5 837 aaKnown RBP12.67□□□□□ -0.38
UBR3-210ENST00000484596 NSFL1CQ9UNZ2 370 aaKnown RBP12.67□□□□□ -0.38
UBR3-210ENST00000484596 BNIP3LO60238 219 aa12.66□□□□□ -0.38
UBR3-210ENST00000484596 NBPF1Q3BBV0 1214 aa12.66□□□□□ -0.38
UBR3-210ENST00000484596 ABHD17AQ96GS6 310 aa12.66□□□□□ -0.38
UBR3-210ENST00000484596 NDFIP2Q9NV92 336 aa12.66□□□□□ -0.38
UBR3-210ENST00000484596 FOXK2Q01167 660 aa12.65□□□□□ -0.38
UBR3-210ENST00000484596 KCNMA1Q12791 1236 aa12.65□□□□□ -0.38
UBR3-210ENST00000484596 ZCCHC2Q9C0B9 1178 aaKnown RBP12.65□□□□□ -0.38
UBR3-210ENST00000484596 MAFBQ9Y5Q3 323 aaPredicted RBP12.65□□□□□ -0.38
UBR3-210ENST00000484596 A0A1W2PNR3 127 aa12.64□□□□□ -0.39
UBR3-210ENST00000484596 PALM3A6NDB9 673 aaPredicted RBP12.64□□□□□ -0.39
UBR3-210ENST00000484596 BCRP11274 1271 aa12.64□□□□□ -0.39
UBR3-210ENST00000484596 GSK3AP49840 483 aa12.64□□□□□ -0.39
UBR3-210ENST00000484596 ARSJQ5FYB0 599 aaPredicted RBP12.64□□□□□ -0.39
UBR3-210ENST00000484596 TBCELQ5QJ74 424 aa12.64□□□□□ -0.39
UBR3-210ENST00000484596 SLC9A9Q8IVB4 645 aa12.64□□□□□ -0.39
UBR3-210ENST00000484596 LARGE2Q8N3Y3 721 aa12.64□□□□□ -0.39
UBR3-210ENST00000484596 ZDHHC1Q8WTX9 485 aa12.64□□□□□ -0.39
UBR3-210ENST00000484596 ARXQ96QS3 562 aa12.64□□□□□ -0.39
UBR3-210ENST00000484596 ZDHHC3Q9NYG2 299 aa12.64□□□□□ -0.39
UBR3-210ENST00000484596 ATXN7L1Q9ULK2 861 aaPredicted RBP12.64□□□□□ -0.39
UBR3-210ENST00000484596 TATP17735 454 aaPredicted RBP12.63□□□□□ -0.39
UBR3-210ENST00000484596 MAP2K3P46734 347 aa12.63□□□□□ -0.39
UBR3-210ENST00000484596 NLRP8Q86W28 1048 aa12.63□□□□□ -0.39
UBR3-210ENST00000484596 MARSP56192 900 aaKnown RBP12.62□□□□□ -0.39
UBR3-210ENST00000484596 TEAD4Q15561 434 aa12.62□□□□□ -0.39
UBR3-210ENST00000484596 FIGNL1Q6PIW4 674 aa12.62□□□□□ -0.39
UBR3-210ENST00000484596 L3MBTL2Q969R5 705 aa12.62□□□□□ -0.39
UBR3-210ENST00000484596 ZNF594Q96JF6 807 aaPredicted RBP12.62□□□□□ -0.39
UBR3-210ENST00000484596 ZIC5Q96T25 663 aa12.62□□□□□ -0.39
UBR3-210ENST00000484596 ENAMQ9NRM1 1142 aa12.62□□□□□ -0.39
UBR3-210ENST00000484596 PCDHGC4Q9Y5F7 938 aa12.62□□□□□ -0.39
UBR3-210ENST00000484596 NOS2P35228 1153 aa12.61□□□□□ -0.39
UBR3-210ENST00000484596 TXLNAP40222 546 aa12.61□□□□□ -0.39
UBR3-210ENST00000484596 SIX5Q8N196 739 aa12.61□□□□□ -0.39
UBR3-210ENST00000484596 KLRG1Q96E93 195 aa12.61□□□□□ -0.39
UBR3-210ENST00000484596 OXCT2Q9BYC2 517 aaPredicted RBP12.61□□□□□ -0.39
UBR3-210ENST00000484596 PPP1R12CQ9BZL4 782 aa12.61□□□□□ -0.39
UBR3-210ENST00000484596 C2CD2LO14523 706 aa12.6□□□□□ -0.39
UBR3-210ENST00000484596 DKK1O94907 266 aa12.6□□□□□ -0.39
UBR3-210ENST00000484596 FGFR3P22607 806 aa12.6□□□□□ -0.39
UBR3-210ENST00000484596 CTBSQ01459 385 aa12.6□□□□□ -0.39
UBR3-210ENST00000484596 SFI1A8K8P3 1242 aa12.59□□□□□ -0.39
UBR3-210ENST00000484596 ATXN7O15265 892 aaPredicted RBP12.59□□□□□ -0.39
UBR3-210ENST00000484596 RASA1P20936 1047 aa12.59□□□□□ -0.39
UBR3-210ENST00000484596 M0R2N6 131 aa12.58□□□□□ -0.4
UBR3-210ENST00000484596 BMP4P12644 408 aa12.58□□□□□ -0.4
UBR3-210ENST00000484596 BICDL1Q6ZP65 573 aa12.58□□□□□ -0.4
UBR3-210ENST00000484596 TSPAN10Q9H1Z9 355 aaPredicted RBP12.58□□□□□ -0.4
UBR3-210ENST00000484596 ZNF232Q9UNY5 417 aa12.58□□□□□ -0.4
UBR3-210ENST00000484596 RNF225M0QZC1 329 aaPredicted RBP12.57□□□□□ -0.4
UBR3-210ENST00000484596 OIP5O43482 229 aa12.57□□□□□ -0.4
UBR3-210ENST00000484596 SH3PXD2AQ5TCZ1 1133 aa12.57□□□□□ -0.4
UBR3-210ENST00000484596 TSEN2Q8NCE0 465 aaKnown RBP12.57□□□□□ -0.4
UBR3-210ENST00000484596 LRRC4BQ9NT99 713 aa12.57□□□□□ -0.4
UBR3-210ENST00000484596 SERTM1A2A2V5 107 aa12.56□□□□□ -0.4
UBR3-210ENST00000484596 RASSF7Q02833 373 aa12.56□□□□□ -0.4
UBR3-210ENST00000484596 NEDD1Q8NHV4 660 aa12.56□□□□□ -0.4
UBR3-210ENST00000484596 SCARF2Q96GP6 870 aaPredicted RBP12.56□□□□□ -0.4
UBR3-210ENST00000484596 HCN2Q9UL51 889 aa12.56□□□□□ -0.4
UBR3-210ENST00000484596 RBM19Q9Y4C8 960 aaKnown RBP12.56□□□□□ -0.4
UBR3-210ENST00000484596 GJA3Q9Y6H8 435 aa12.56□□□□□ -0.4
UBR3-210ENST00000484596 DCDC2BA2VCK2 349 aa12.55□□□□□ -0.4
UBR3-210ENST00000484596 IRS1P35568 1242 aa12.55□□□□□ -0.4
UBR3-210ENST00000484596 TNP2Q05952 138 aa12.55□□□□□ -0.4
UBR3-210ENST00000484596 KANK4Q5T7N3 995 aaPredicted RBP12.55□□□□□ -0.4
UBR3-210ENST00000484596 EML1O00423 815 aa12.54□□□□□ -0.4
UBR3-210ENST00000484596 MAPTP10636 758 aaKnown RBP12.54□□□□□ -0.4
UBR3-210ENST00000484596 PSMA6P60900 246 aaKnown RBP12.54□□□□□ -0.4
UBR3-210ENST00000484596 C1orf229Q6ZS94 237 aaPredicted RBP12.54□□□□□ -0.4
UBR3-210ENST00000484596 HOMEZQ8IX15 550 aa12.54□□□□□ -0.4
UBR3-210ENST00000484596 C7orf43Q8WVR3 580 aa12.54□□□□□ -0.4
UBR3-210ENST00000484596 KHNYNO15037 678 aaKnown RBP12.53□□□□□ -0.4
UBR3-210ENST00000484596 PPP1R15AO75807 674 aaPredicted RBP12.53□□□□□ -0.4
UBR3-210ENST00000484596 LMOD1P29536 600 aaPredicted RBP12.53□□□□□ -0.4
UBR3-210ENST00000484596 LARP1Q6PKG0 1096 aaKnown RBP12.53□□□□□ -0.4
UBR3-210ENST00000484596 GALNT6Q8NCL4 622 aa12.53□□□□□ -0.4
UBR3-210ENST00000484596 GDF2Q9UK05 429 aaPredicted RBP12.53□□□□□ -0.4
UBR3-210ENST00000484596 GDF11O95390 407 aa12.52□□□□□ -0.41
UBR3-210ENST00000484596 SEC13P55735 322 aa12.52□□□□□ -0.41
UBR3-210ENST00000484596 CRTC2Q53ET0 693 aaPredicted RBP12.52□□□□□ -0.41
UBR3-210ENST00000484596 TMEM151AQ8N4L1 468 aa12.52□□□□□ -0.41
UBR3-210ENST00000484596 SHISA8B8ZZ34 492 aa12.51□□□□□ -0.41
UBR3-210ENST00000484596 CD33P20138 364 aa12.51□□□□□ -0.41
UBR3-210ENST00000484596 PTK7Q13308 1070 aa12.51□□□□□ -0.41
UBR3-210ENST00000484596 CFAP70Q5T0N1 1121 aa12.51□□□□□ -0.41
UBR3-210ENST00000484596 SAMD5Q5TGI4 173 aa12.51□□□□□ -0.41
UBR3-210ENST00000484596 GOLGA6L1Q8N7Z2 621 aa12.51□□□□□ -0.41
UBR3-210ENST00000484596 HCN4Q9Y3Q4 1203 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms