RNA–Protein interactions for RNA: ENST00000484080.5

CDK18-210, Transcript of cyclin dependent kinase 18, human

TSL 2

Gene CDK18, Length 1,040 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK18-210	ENST00000484080	CIC	Q96RK0	1608 aa	Predicted RBP	19.06	■□□□□ 0.64
CDK18-210	ENST00000484080	NUP188	Q5SRE5	1749 aa		19.05	■□□□□ 0.64
CDK18-210	ENST00000484080	IL6ST	P40189	918 aa	Predicted RBP	19.05	■□□□□ 0.64
CDK18-210	ENST00000484080	R3HDM1	Q15032	1099 aa	Known RBP	19.05	■□□□□ 0.64
CDK18-210	ENST00000484080	C5	P01031	1676 aa		19.05	■□□□□ 0.64
CDK18-210	ENST00000484080	USP16	Q9Y5T5	823 aa		19.04	■□□□□ 0.64
CDK18-210	ENST00000484080	KDM3B	Q7LBC6	1761 aa		19.04	■□□□□ 0.64
CDK18-210	ENST00000484080	C4B	P0C0L5	1744 aa		19.03	■□□□□ 0.64
CDK18-210	ENST00000484080	TAF1L	Q8IZX4	1826 aa		19.03	■□□□□ 0.64
CDK18-210	ENST00000484080	RFC4	P35249	363 aa		19.03	■□□□□ 0.64
CDK18-210	ENST00000484080	DUSP27	Q5VZP5	1158 aa		19.03	■□□□□ 0.64
CDK18-210	ENST00000484080	INTS5	Q6P9B9	1019 aa	Known RBP	19.03	■□□□□ 0.64
CDK18-210	ENST00000484080	ANO8	Q9HCE9	1232 aa	Predicted RBP	19.03	■□□□□ 0.64
CDK18-210	ENST00000484080	RGL2	O15211	777 aa		19.02	■□□□□ 0.64
CDK18-210	ENST00000484080	MSH5	O43196	834 aa		19.02	■□□□□ 0.64
CDK18-210	ENST00000484080	ZNF827	Q17R98	1081 aa		19.02	■□□□□ 0.64
CDK18-210	ENST00000484080	CCDC30	Q5VVM6	783 aa		19.02	■□□□□ 0.64
CDK18-210	ENST00000484080	ZNF428	Q96B54	188 aa		19.02	■□□□□ 0.64
CDK18-210	ENST00000484080	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	19.01	■□□□□ 0.63
CDK18-210	ENST00000484080	ZPR1	O75312	459 aa		19.01	■□□□□ 0.63
CDK18-210	ENST00000484080	CT47B1	P0C2W7	299 aa	Predicted RBP	19.01	■□□□□ 0.63
CDK18-210	ENST00000484080	SLFN5	Q08AF3	891 aa		19.01	■□□□□ 0.63
CDK18-210	ENST00000484080	DBF4	Q9UBU7	674 aa	Predicted RBP	19.01	■□□□□ 0.63
CDK18-210	ENST00000484080	ZBED9	Q6R2W3	1325 aa		19	■□□□□ 0.63
CDK18-210	ENST00000484080	EIF2S2	P20042	333 aa	Known RBP	19	■□□□□ 0.63
CDK18-210	ENST00000484080	CANX	P27824	592 aa	Known RBP	19	■□□□□ 0.63
CDK18-210	ENST00000484080	EIF5	P55010	431 aa	Known RBP	19	■□□□□ 0.63
CDK18-210	ENST00000484080	HDGFL1	Q5TGJ6	251 aa		19	■□□□□ 0.63
CDK18-210	ENST00000484080	FANCI	Q9NVI1	1328 aa		19	■□□□□ 0.63
CDK18-210	ENST00000484080	TWISTNB	Q3B726	338 aa	Predicted RBP	18.99	■□□□□ 0.63
CDK18-210	ENST00000484080	NLGN1	Q8N2Q7	840 aa		18.99	■□□□□ 0.63
CDK18-210	ENST00000484080	STK31	Q9BXU1	1019 aa		18.99	■□□□□ 0.63
CDK18-210	ENST00000484080	MTFR1L	Q9H019	292 aa		18.99	■□□□□ 0.63
CDK18-210	ENST00000484080	HYPK	Q9NX55	129 aa		18.99	■□□□□ 0.63
CDK18-210	ENST00000484080	PNPLA7	Q6ZV29	1317 aa		18.99	■□□□□ 0.63
CDK18-210	ENST00000484080	COL5A3	P25940	1745 aa	Predicted RBP	18.98	■□□□□ 0.63
CDK18-210	ENST00000484080	A1BG	P04217	495 aa		18.98	■□□□□ 0.63
CDK18-210	ENST00000484080	ARHGEF1	Q92888	912 aa	Known RBP	18.98	■□□□□ 0.63
CDK18-210	ENST00000484080	TSR2	Q969E8	191 aa	Known RBP	18.98	■□□□□ 0.63
CDK18-210	ENST00000484080	DDX21	Q9NR30	783 aa	Known RBP eCLIP	18.98	■□□□□ 0.63
CDK18-210	ENST00000484080	ZBTB1	Q9Y2K1	713 aa		18.98	■□□□□ 0.63
CDK18-210	ENST00000484080	QSER1	Q2KHR3	1735 aa		18.97	■□□□□ 0.63
CDK18-210	ENST00000484080	SENP3-EIF4A1	A0A087X0R7	540 aa		18.97	■□□□□ 0.63
CDK18-210	ENST00000484080	PSD	A5PKW4	1024 aa	Predicted RBP	18.97	■□□□□ 0.63
CDK18-210	ENST00000484080	PHF14	O94880	888 aa		18.97	■□□□□ 0.63
CDK18-210	ENST00000484080	COL23A1	Q86Y22	540 aa	Predicted RBP	18.97	■□□□□ 0.63
CDK18-210	ENST00000484080	ZNF652	Q9Y2D9	606 aa		18.97	■□□□□ 0.63
CDK18-210	ENST00000484080	CLEC4G	Q6UXB4	293 aa		18.96	■□□□□ 0.63
CDK18-210	ENST00000484080	TRMT2A	Q8IZ69	625 aa	Known RBP	18.96	■□□□□ 0.63
CDK18-210	ENST00000484080	C8orf58	Q8NAV2	365 aa		18.96	■□□□□ 0.63
CDK18-210	ENST00000484080	SPON1	Q9HCB6	807 aa		18.96	■□□□□ 0.63
CDK18-210	ENST00000484080	NARF	Q9UHQ1	456 aa		18.96	■□□□□ 0.63
CDK18-210	ENST00000484080	TJP1	Q07157	1748 aa		18.96	■□□□□ 0.63
CDK18-210	ENST00000484080	PRAMEF22	A3QJZ6	481 aa		18.95	■□□□□ 0.62
CDK18-210	ENST00000484080	POLD1	P28340	1107 aa		18.95	■□□□□ 0.62
CDK18-210	ENST00000484080	COL15A1	P39059	1388 aa		18.94	■□□□□ 0.62
CDK18-210	ENST00000484080	ERVV-1	B6SEH8	477 aa		18.94	■□□□□ 0.62
CDK18-210	ENST00000484080	ELL2	O00472	640 aa	Predicted RBP	18.94	■□□□□ 0.62
CDK18-210	ENST00000484080	EXOSC9	Q06265	439 aa	Known RBP	18.94	■□□□□ 0.62
CDK18-210	ENST00000484080	KIF6	Q6ZMV9	814 aa		18.94	■□□□□ 0.62
CDK18-210	ENST00000484080	ARX	Q96QS3	562 aa		18.94	■□□□□ 0.62
CDK18-210	ENST00000484080	ZNF330	Q9Y3S2	320 aa	Predicted RBP	18.94	■□□□□ 0.62
CDK18-210	ENST00000484080	DDX58	O95786	925 aa	Known RBP	18.93	■□□□□ 0.62
CDK18-210	ENST00000484080	DZIP3	Q86Y13	1208 aa	Known RBP	18.93	■□□□□ 0.62
CDK18-210	ENST00000484080	MYH14	Q7Z406	1995 aa	Known RBP	18.93	■□□□□ 0.62
CDK18-210	ENST00000484080	UBR3	Q6ZT12	1888 aa		18.92	■□□□□ 0.62
CDK18-210	ENST00000484080	VAMP4	O75379	141 aa		18.92	■□□□□ 0.62
CDK18-210	ENST00000484080	SPINK5	Q9NQ38	1064 aa	Predicted RBP	18.92	■□□□□ 0.62
CDK18-210	ENST00000484080	USP42	Q9H9J4	1324 aa	Known RBP	18.92	■□□□□ 0.62
CDK18-210	ENST00000484080	LAMB4	A4D0S4	1761 aa		18.91	■□□□□ 0.62
CDK18-210	ENST00000484080	NBPF26	B4DH59	902 aa		18.91	■□□□□ 0.62
CDK18-210	ENST00000484080	MYL6B	P14649	208 aa		18.91	■□□□□ 0.62
CDK18-210	ENST00000484080	KRT24	Q2M2I5	525 aa		18.91	■□□□□ 0.62
CDK18-210	ENST00000484080	NBPF10	Q6P3W6	841 aa	Known RBP	18.91	■□□□□ 0.62
CDK18-210	ENST00000484080	NBPF15	Q8N660	670 aa		18.91	■□□□□ 0.62
CDK18-210	ENST00000484080	HSP90AB3P	Q58FF7	597 aa		18.9	■□□□□ 0.62
CDK18-210	ENST00000484080	TSPYL6	Q8N831	410 aa		18.9	■□□□□ 0.62
CDK18-210	ENST00000484080	CHPF2	Q9P2E5	772 aa		18.9	■□□□□ 0.62
CDK18-210	ENST00000484080	PDIA6	Q15084	440 aa		18.89	■□□□□ 0.61
CDK18-210	ENST00000484080	ALDH1L2	Q3SY69	923 aa		18.89	■□□□□ 0.61
CDK18-210	ENST00000484080	CDCA7L	Q96GN5	454 aa		18.89	■□□□□ 0.61
CDK18-210	ENST00000484080	GYS1	P13807	737 aa		18.88	■□□□□ 0.61
CDK18-210	ENST00000484080	USPL1	Q5W0Q7	1092 aa		18.88	■□□□□ 0.61
CDK18-210	ENST00000484080	NECTIN2	Q92692	538 aa		18.88	■□□□□ 0.61
CDK18-210	ENST00000484080	TBC1D2B	Q9UPU7	963 aa		18.88	■□□□□ 0.61
CDK18-210	ENST00000484080	MAP3K15	Q6ZN16	1313 aa		18.88	■□□□□ 0.61
CDK18-210	ENST00000484080	ZBTB7A	O95365	584 aa		18.87	■□□□□ 0.61
CDK18-210	ENST00000484080	SLC4A2	P04920	1241 aa		18.87	■□□□□ 0.61
CDK18-210	ENST00000484080	ANKRD13D	Q6ZTN6	518 aa		18.87	■□□□□ 0.61
CDK18-210	ENST00000484080	COPS6	Q7L5N1	327 aa		18.87	■□□□□ 0.61
CDK18-210	ENST00000484080	PARP3	Q9Y6F1	533 aa		18.87	■□□□□ 0.61
CDK18-210	ENST00000484080	CACNA1F	O60840	1977 aa		18.86	■□□□□ 0.61
CDK18-210	ENST00000484080	PLBD2	Q8NHP8	589 aa		18.86	■□□□□ 0.61
CDK18-210	ENST00000484080	SETDB2	Q96T68	719 aa		18.86	■□□□□ 0.61
CDK18-210	ENST00000484080	CAMTA2	O94983	1202 aa		18.85	■□□□□ 0.61
CDK18-210	ENST00000484080	AMIGO3	Q86WK7	504 aa		18.85	■□□□□ 0.61
CDK18-210	ENST00000484080	XAGE3	Q8WTP9	111 aa		18.85	■□□□□ 0.61
CDK18-210	ENST00000484080	PPP1R1B	Q9UD71	204 aa	Predicted RBP	18.85	■□□□□ 0.61
CDK18-210	ENST00000484080	ATF5	Q9Y2D1	282 aa	Predicted RBP	18.85	■□□□□ 0.61
CDK18-210	ENST00000484080	AIMP1	Q12904	312 aa	Known RBP	18.84	■□□□□ 0.61

Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms