RNA–Protein interactions for RNA: ENST00000484077.1

RIF1-210, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 782 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-210ENST00000484077 ETNK1Q9HBU6 452 aa10.03□□□□□ -0.8
RIF1-210ENST00000484077 KDM5BQ9UGL1 1544 aa10.02□□□□□ -0.8
RIF1-210ENST00000484077 USP17L5A8MUK1 530 aa10.02□□□□□ -0.81
RIF1-210ENST00000484077 INHAP05111 366 aa10.02□□□□□ -0.81
RIF1-210ENST00000484077 NBPF10Q6P3W6 841 aaKnown RBP10.02□□□□□ -0.81
RIF1-210ENST00000484077 NBPF15Q8N660 670 aa10.02□□□□□ -0.81
RIF1-210ENST00000484077 FHOD3Q2V2M9 1422 aa10.01□□□□□ -0.81
RIF1-210ENST00000484077 GDF10P55107 478 aa10.01□□□□□ -0.81
RIF1-210ENST00000484077 GNASQ5JWF2 1037 aa10.01□□□□□ -0.81
RIF1-210ENST00000484077 SV2AQ7L0J3 742 aa10.01□□□□□ -0.81
RIF1-210ENST00000484077 TRIM50Q86XT4 487 aa10.01□□□□□ -0.81
RIF1-210ENST00000484077 ABCC10Q5T3U5 1492 aa10.01□□□□□ -0.81
RIF1-210ENST00000484077 ATP9BO43861 1147 aa10□□□□□ -0.81
RIF1-210ENST00000484077 RHOQP17081 205 aa10□□□□□ -0.81
RIF1-210ENST00000484077 SCNN1DP51172 638 aa10□□□□□ -0.81
RIF1-210ENST00000484077 POU4F2Q12837 409 aa10□□□□□ -0.81
RIF1-210ENST00000484077 NCOA4Q13772 614 aa10□□□□□ -0.81
RIF1-210ENST00000484077 GLMNQ92990 594 aa10□□□□□ -0.81
RIF1-210ENST00000484077 PCDHGA11Q9Y5H2 935 aa10□□□□□ -0.81
RIF1-210ENST00000484077 H7C1W4 665 aa9.99□□□□□ -0.81
RIF1-210ENST00000484077 TMEM214Q6NUQ4 689 aaKnown RBP9.99□□□□□ -0.81
RIF1-210ENST00000484077 PPARGC1BQ86YN6 1023 aaKnown RBP9.99□□□□□ -0.81
RIF1-210ENST00000484077 RHBDD1Q8TEB9 315 aa9.99□□□□□ -0.81
RIF1-210ENST00000484077 SLC4A9Q96Q91 983 aa9.99□□□□□ -0.81
RIF1-210ENST00000484077 UCN2Q96RP3 112 aa9.99□□□□□ -0.81
RIF1-210ENST00000484077 TSPOAP1O95153 1857 aa9.99□□□□□ -0.81
RIF1-210ENST00000484077 HECW1Q76N89 1606 aa9.99□□□□□ -0.81
RIF1-210ENST00000484077 ASXL2Q76L83 1435 aa9.99□□□□□ -0.81
RIF1-210ENST00000484077 ARHGAP35Q9NRY4 1499 aa9.98□□□□□ -0.81
RIF1-210ENST00000484077 GLI2P10070 1586 aa9.98□□□□□ -0.81
RIF1-210ENST00000484077 MAP3K4Q9Y6R4 1608 aa9.98□□□□□ -0.81
RIF1-210ENST00000484077 BACH1O14867 736 aa9.98□□□□□ -0.81
RIF1-210ENST00000484077 ATP1A2P50993 1020 aa9.98□□□□□ -0.81
RIF1-210ENST00000484077 GTF2IP78347 998 aa9.98□□□□□ -0.81
RIF1-210ENST00000484077 TLR1Q15399 786 aa9.98□□□□□ -0.81
RIF1-210ENST00000484077 TRIM22Q8IYM9 498 aa9.98□□□□□ -0.81
RIF1-210ENST00000484077 TIMMDC1Q9NPL8 285 aa9.98□□□□□ -0.81
RIF1-210ENST00000484077 PPRC1Q5VV67 1664 aaKnown RBP9.98□□□□□ -0.81
RIF1-210ENST00000484077 WDR7Q9Y4E6 1490 aa9.98□□□□□ -0.81
RIF1-210ENST00000484077 A0A1B0GTH6 734 aa9.97□□□□□ -0.81
RIF1-210ENST00000484077 RANGAP1P46060 587 aaPredicted RBP9.97□□□□□ -0.81
RIF1-210ENST00000484077 STK17AQ9UEE5 414 aa9.97□□□□□ -0.81
RIF1-210ENST00000484077 PCF11O94913 1555 aaKnown RBP9.97□□□□□ -0.81
RIF1-210ENST00000484077 CFAP43Q8NDM7 1665 aa9.96□□□□□ -0.81
RIF1-210ENST00000484077 USP17L3A6NCW0 530 aa9.96□□□□□ -0.82
RIF1-210ENST00000484077 USP17L4A6NCW7 530 aa9.96□□□□□ -0.82
RIF1-210ENST00000484077 TMEM229AB2RXF0 380 aa9.96□□□□□ -0.82
RIF1-210ENST00000484077 F11P03951 625 aa9.96□□□□□ -0.82
RIF1-210ENST00000484077 SMTNP53814 917 aa9.96□□□□□ -0.82
RIF1-210ENST00000484077 FAM69CQ0P6D2 419 aa9.96□□□□□ -0.82
RIF1-210ENST00000484077 MTFR1Q15390 333 aa9.96□□□□□ -0.82
RIF1-210ENST00000484077 USP17L2Q6R6M4 530 aa9.96□□□□□ -0.82
RIF1-210ENST00000484077 TBC1D9Q6ZT07 1266 aa9.96□□□□□ -0.82
RIF1-210ENST00000484077 USP17L1Q7RTZ2 530 aa9.96□□□□□ -0.82
RIF1-210ENST00000484077 VWA5B2Q8N398 1253 aa9.96□□□□□ -0.82
RIF1-210ENST00000484077 NUP153P49790 1475 aaKnown RBP9.96□□□□□ -0.82
RIF1-210ENST00000484077 LRRIQ1Q96JM4 1722 aa9.96□□□□□ -0.82
RIF1-210ENST00000484077 CDC14CA4D256 554 aa9.95□□□□□ -0.82
RIF1-210ENST00000484077 FAM181BA6NEQ2 426 aa9.95□□□□□ -0.82
RIF1-210ENST00000484077 LBRQ14739 615 aaKnown RBP9.95□□□□□ -0.82
RIF1-210ENST00000484077 CALR3Q96L12 384 aaKnown RBP9.95□□□□□ -0.82
RIF1-210ENST00000484077 EPRSP07814 1512 aaKnown RBP9.95□□□□□ -0.82
RIF1-210ENST00000484077 FOXR1Q6PIV2 292 aa9.94□□□□□ -0.82
RIF1-210ENST00000484077 GPR161Q8N6U8 529 aaKnown RBP9.94□□□□□ -0.82
RIF1-210ENST00000484077 ZSCAN1Q8NBB4 408 aa9.94□□□□□ -0.82
RIF1-210ENST00000484077 A6NJY4 79 aa9.93□□□□□ -0.82
RIF1-210ENST00000484077 CDK2AP1O14519 115 aa9.93□□□□□ -0.82
RIF1-210ENST00000484077 C4orf17Q53FE4 359 aa9.93□□□□□ -0.82
RIF1-210ENST00000484077 DEPDC4Q8N2C3 294 aa9.93□□□□□ -0.82
RIF1-210ENST00000484077 LARGE2Q8N3Y3 721 aa9.93□□□□□ -0.82
RIF1-210ENST00000484077 C1orf216Q8TAB5 229 aa9.93□□□□□ -0.82
RIF1-210ENST00000484077 KDM6BO15054 1643 aa9.93□□□□□ -0.82
RIF1-210ENST00000484077 FMN1Q68DA7 1419 aa9.92□□□□□ -0.82
RIF1-210ENST00000484077 PSME1Q06323 249 aa9.92□□□□□ -0.82
RIF1-210ENST00000484077 RIPOR1Q6ZS17 1223 aa9.92□□□□□ -0.82
RIF1-210ENST00000484077 ZNF837Q96EG3 531 aaPredicted RBP9.92□□□□□ -0.82
RIF1-210ENST00000484077 GAS2L1Q99501 681 aaPredicted RBP9.92□□□□□ -0.82
RIF1-210ENST00000484077 NIFKQ9BYG3 293 aaKnown RBP9.92□□□□□ -0.82
RIF1-210ENST00000484077 ARID3CA6NKF2 412 aa9.91□□□□□ -0.82
RIF1-210ENST00000484077 STAU1O95793 577 aaKnown RBP9.91□□□□□ -0.82
RIF1-210ENST00000484077 COL25A1Q9BXS0 654 aaPredicted RBP9.91□□□□□ -0.82
RIF1-210ENST00000484077 PPP1R12CQ9BZL4 782 aa9.91□□□□□ -0.82
RIF1-210ENST00000484077 CUEDC1Q9NWM3 386 aaPredicted RBP9.91□□□□□ -0.82
RIF1-210ENST00000484077 TFIP11Q9UBB9 837 aaKnown RBP9.91□□□□□ -0.82
RIF1-210ENST00000484077 MKRN1Q9UHC7 482 aaKnown RBP9.91□□□□□ -0.82
RIF1-210ENST00000484077 MAFBQ9Y5Q3 323 aaPredicted RBP9.91□□□□□ -0.82
RIF1-210ENST00000484077 ABCA9Q8IUA7 1624 aa9.91□□□□□ -0.82
RIF1-210ENST00000484077 CDK13Q14004 1512 aaKnown RBP9.91□□□□□ -0.82
RIF1-210ENST00000484077 ATP10BO94823 1461 aa9.91□□□□□ -0.82
RIF1-210ENST00000484077 PALM3A6NDB9 673 aaPredicted RBP9.9□□□□□ -0.82
RIF1-210ENST00000484077 M0R2N6 131 aa9.9□□□□□ -0.82
RIF1-210ENST00000484077 DBN1Q16643 649 aa9.9□□□□□ -0.82
RIF1-210ENST00000484077 DNAAF2Q9NVR5 837 aaKnown RBP9.9□□□□□ -0.82
RIF1-210ENST00000484077 ZNF358Q9NW07 568 aa9.9□□□□□ -0.82
RIF1-210ENST00000484077 ZBTB7BO15156 539 aaPredicted RBP9.89□□□□□ -0.83
RIF1-210ENST00000484077 LORP23490 312 aaPredicted RBP9.89□□□□□ -0.83
RIF1-210ENST00000484077 SIX5Q8N196 739 aa9.89□□□□□ -0.83
RIF1-210ENST00000484077 TRERF1Q96PN7 1200 aa9.89□□□□□ -0.83
RIF1-210ENST00000484077 NUCKS1Q9H1E3 243 aaKnown RBP9.89□□□□□ -0.83
RIF1-210ENST00000484077 SERTAD1Q9UHV2 236 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms