RNA–Protein interactions for RNA: ENST00000484006.1

THUMPD3-209, Transcript of THUMP domain containing 3, humanhuman

TSL 4

Gene THUMPD3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-209ENST00000484006 GDF2Q9UK05 429 aaPredicted RBP8.86□□□□□ -0.99
THUMPD3-209ENST00000484006 ATXN7L1Q9ULK2 861 aaPredicted RBP8.86□□□□□ -0.99
THUMPD3-209ENST00000484006 SOGA1O94964 1423 aa8.86□□□□□ -0.99
THUMPD3-209ENST00000484006 GDF10P55107 478 aa8.85□□□□□ -0.99
THUMPD3-209ENST00000484006 UBAP2LQ14157 1087 aaKnown RBP8.85□□□□□ -0.99
THUMPD3-209ENST00000484006 PLPP7Q8NBV4 271 aa8.85□□□□□ -0.99
THUMPD3-209ENST00000484006 GALNT6Q8NCL4 622 aa8.85□□□□□ -0.99
THUMPD3-209ENST00000484006 SYNJ1O43426 1573 aa8.84□□□□□ -0.99
THUMPD3-209ENST00000484006 TBC1D9Q6ZT07 1266 aa8.84□□□□□ -0.99
THUMPD3-209ENST00000484006 C1orf216Q8TAB5 229 aa8.84□□□□□ -0.99
THUMPD3-209ENST00000484006 CRISPLD1Q9H336 500 aa8.84□□□□□ -0.99
THUMPD3-209ENST00000484006 POLA1P09884 1462 aaPredicted RBP8.83□□□□□ -1
THUMPD3-209ENST00000484006 SCNN1DP51172 638 aa8.83□□□□□ -1
THUMPD3-209ENST00000484006 SMTNP53814 917 aa8.83□□□□□ -1
THUMPD3-209ENST00000484006 FIGNL1Q6PIW4 674 aa8.83□□□□□ -1
THUMPD3-209ENST00000484006 FAM9AQ8IZU1 332 aaPredicted RBP8.83□□□□□ -1
THUMPD3-209ENST00000484006 DCAF5Q96JK2 942 aa8.83□□□□□ -1
THUMPD3-209ENST00000484006 NIFKQ9BYG3 293 aaKnown RBP8.83□□□□□ -1
THUMPD3-209ENST00000484006 TDRD9Q8NDG6 1382 aaKnown RBP8.83□□□□□ -1
THUMPD3-209ENST00000484006 BMP4P12644 408 aa8.82□□□□□ -1
THUMPD3-209ENST00000484006 PLA2G4AP47712 749 aa8.82□□□□□ -1
THUMPD3-209ENST00000484006 EDARADDQ8WWZ3 215 aa8.82□□□□□ -1
THUMPD3-209ENST00000484006 AIDAQ96BJ3 306 aa8.82□□□□□ -1
THUMPD3-209ENST00000484006 BNIP3LO60238 219 aa8.81□□□□□ -1
THUMPD3-209ENST00000484006 FGFR3P22607 806 aa8.81□□□□□ -1
THUMPD3-209ENST00000484006 MCM6Q14566 821 aa8.81□□□□□ -1
THUMPD3-209ENST00000484006 GOLGA6L1Q8N7Z2 621 aa8.81□□□□□ -1
THUMPD3-209ENST00000484006 IFT140Q96RY7 1462 aa8.81□□□□□ -1
THUMPD3-209ENST00000484006 LOC100996750A0A140TA64 210 aa8.8□□□□□ -1
THUMPD3-209ENST00000484006 PLA2G4EQ3MJ16 856 aa8.8□□□□□ -1
THUMPD3-209ENST00000484006 NLRP8Q86W28 1048 aa8.8□□□□□ -1
THUMPD3-209ENST00000484006 WWC1Q8IX03 1113 aa8.8□□□□□ -1
THUMPD3-209ENST00000484006 ABHD17AQ96GS6 310 aa8.8□□□□□ -1
THUMPD3-209ENST00000484006 SLC4A9Q96Q91 983 aa8.8□□□□□ -1
THUMPD3-209ENST00000484006 KRTAP4-6Q9BYQ5 205 aa8.8□□□□□ -1
THUMPD3-209ENST00000484006 NDFIP2Q9NV92 336 aa8.8□□□□□ -1
THUMPD3-209ENST00000484006 MKL2Q9ULH7 1088 aa8.8□□□□□ -1
THUMPD3-209ENST00000484006 PCDHGC4Q9Y5F7 938 aa8.8□□□□□ -1
THUMPD3-209ENST00000484006 AQRO60306 1485 aaKnown RBP eCLIP8.8□□□□□ -1
THUMPD3-209ENST00000484006 TOP2BQ02880 1626 aa8.8□□□□□ -1
THUMPD3-209ENST00000484006 ZNF608Q9ULD9 1512 aaPredicted RBP8.8□□□□□ -1
THUMPD3-209ENST00000484006 CDK2AP1O14519 115 aa8.79□□□□□ -1
THUMPD3-209ENST00000484006 MSTNO14793 375 aa8.79□□□□□ -1
THUMPD3-209ENST00000484006 LZTS3O60299 673 aaPredicted RBP8.79□□□□□ -1
THUMPD3-209ENST00000484006 ZCCHC2Q9C0B9 1178 aaKnown RBP8.79□□□□□ -1
THUMPD3-209ENST00000484006 SERTAD1Q9UHV2 236 aa8.79□□□□□ -1
THUMPD3-209ENST00000484006 A6NJY4 79 aa8.78□□□□□ -1
THUMPD3-209ENST00000484006 SHISA8B8ZZ34 492 aa8.78□□□□□ -1
THUMPD3-209ENST00000484006 C2CD2LO14523 706 aa8.78□□□□□ -1
THUMPD3-209ENST00000484006 SNRPNP63162 240 aaKnown RBP8.78□□□□□ -1
THUMPD3-209ENST00000484006 CTBSQ01459 385 aa8.78□□□□□ -1
THUMPD3-209ENST00000484006 EML3Q32P44 896 aa8.78□□□□□ -1
THUMPD3-209ENST00000484006 NBPF1Q3BBV0 1214 aa8.78□□□□□ -1
THUMPD3-209ENST00000484006 C1orf229Q6ZS94 237 aaPredicted RBP8.78□□□□□ -1
THUMPD3-209ENST00000484006 RRAGCQ9HB90 399 aa8.78□□□□□ -1
THUMPD3-209ENST00000484006 BIVM-ERCC5R4GMW8 1640 aa8.77□□□□□ -1.01
THUMPD3-209ENST00000484006 TMEM229AB2RXF0 380 aa8.77□□□□□ -1.01
THUMPD3-209ENST00000484006 BACH1O14867 736 aa8.77□□□□□ -1.01
THUMPD3-209ENST00000484006 MTFR1Q15390 333 aa8.77□□□□□ -1.01
THUMPD3-209ENST00000484006 ARSJQ5FYB0 599 aaPredicted RBP8.77□□□□□ -1.01
THUMPD3-209ENST00000484006 NOD1Q9Y239 953 aa8.77□□□□□ -1.01
THUMPD3-209ENST00000484006 COG6Q9Y2V7 657 aa8.77□□□□□ -1.01
THUMPD3-209ENST00000484006 ATXN7O15265 892 aaPredicted RBP8.76□□□□□ -1.01
THUMPD3-209ENST00000484006 SKIP12755 728 aa8.76□□□□□ -1.01
THUMPD3-209ENST00000484006 TATP17735 454 aaPredicted RBP8.76□□□□□ -1.01
THUMPD3-209ENST00000484006 AMPD1P23109 780 aa8.76□□□□□ -1.01
THUMPD3-209ENST00000484006 ALYREFQ86V81 257 aaKnown RBP8.76□□□□□ -1.01
THUMPD3-209ENST00000484006 DNAAF2Q9NVR5 837 aaKnown RBP8.76□□□□□ -1.01
THUMPD3-209ENST00000484006 GGA1Q9UJY5 639 aa8.76□□□□□ -1.01
THUMPD3-209ENST00000484006 PCDHGA11Q9Y5H2 935 aa8.76□□□□□ -1.01
THUMPD3-209ENST00000484006 A0A1W2PNR3 127 aa8.75□□□□□ -1.01
THUMPD3-209ENST00000484006 PIK3R2O00459 728 aa8.75□□□□□ -1.01
THUMPD3-209ENST00000484006 ARAFP10398 606 aa8.75□□□□□ -1.01
THUMPD3-209ENST00000484006 ATP4AP20648 1035 aa8.75□□□□□ -1.01
THUMPD3-209ENST00000484006 SLCO4C1Q6ZQN7 724 aa8.75□□□□□ -1.01
THUMPD3-209ENST00000484006 ALG2Q9H553 416 aa8.75□□□□□ -1.01
THUMPD3-209ENST00000484006 ZDHHC3Q9NYG2 299 aa8.75□□□□□ -1.01
THUMPD3-209ENST00000484006 CABP1Q9NZU7 370 aa8.75□□□□□ -1.01
THUMPD3-209ENST00000484006 TARBP1Q13395 1621 aaKnown RBP8.74□□□□□ -1.01
THUMPD3-209ENST00000484006 PIK3CDO00329 1044 aa8.74□□□□□ -1.01
THUMPD3-209ENST00000484006 NFATC2IPQ8NCF5 419 aa8.74□□□□□ -1.01
THUMPD3-209ENST00000484006 SPOCK3Q9BQ16 436 aa8.74□□□□□ -1.01
THUMPD3-209ENST00000484006 IQSEC3Q9UPP2 1182 aaPredicted RBP8.74□□□□□ -1.01
THUMPD3-209ENST00000484006 GJA3Q9Y6H8 435 aa8.74□□□□□ -1.01
THUMPD3-209ENST00000484006 GAPVD1Q14C86 1478 aa8.73□□□□□ -1.01
THUMPD3-209ENST00000484006 RAD21O60216 631 aa8.73□□□□□ -1.01
THUMPD3-209ENST00000484006 TNP2Q05952 138 aa8.73□□□□□ -1.01
THUMPD3-209ENST00000484006 CHMP7Q8WUX9 453 aaPredicted RBP8.73□□□□□ -1.01
THUMPD3-209ENST00000484006 BTBD6Q96KE9 485 aa8.73□□□□□ -1.01
THUMPD3-209ENST00000484006 EIF4G3O43432 1585 aaKnown RBP8.73□□□□□ -1.01
THUMPD3-209ENST00000484006 MAPTP10636 758 aaKnown RBP8.72□□□□□ -1.01
THUMPD3-209ENST00000484006 EPXP11678 715 aa8.72□□□□□ -1.01
THUMPD3-209ENST00000484006 FAM182BQ5T319 152 aa8.72□□□□□ -1.01
THUMPD3-209ENST00000484006 ZNF295-AS1Q8N0V1 137 aa8.72□□□□□ -1.01
THUMPD3-209ENST00000484006 ZIC5Q96T25 663 aa8.72□□□□□ -1.01
THUMPD3-209ENST00000484006 KIF27Q86VH2 1401 aa8.71□□□□□ -1.01
THUMPD3-209ENST00000484006 ABCA10Q8WWZ4 1543 aa8.71□□□□□ -1.01
THUMPD3-209ENST00000484006 NEURL1BA8MQ27 555 aa8.71□□□□□ -1.02
THUMPD3-209ENST00000484006 KHNYNO15037 678 aaKnown RBP8.71□□□□□ -1.02
THUMPD3-209ENST00000484006 ITGB2P05107 769 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms