RNA–Protein interactions for RNA: ENST00000483871.6

SRSF6-202, Transcript of serine and arginine rich splicing factor 6, humanhuman

TSL 2

Gene SRSF6, Length 1,680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-202ENST00000483871 CRKLP46109 303 aaKnown RBP18.18■□□□□ 0.5
SRSF6-202ENST00000483871 BCL2L13Q9BXK5 485 aa18.18■□□□□ 0.5
SRSF6-202ENST00000483871 PDIA6Q15084 440 aa18.18■□□□□ 0.5
SRSF6-202ENST00000483871 CCDC30Q5VVM6 783 aa18.18■□□□□ 0.5
SRSF6-202ENST00000483871 INTS5Q6P9B9 1019 aaKnown RBP18.18■□□□□ 0.5
SRSF6-202ENST00000483871 SMIM5Q71RC9 77 aa18.18■□□□□ 0.5
SRSF6-202ENST00000483871 CHPF2Q9P2E5 772 aa18.18■□□□□ 0.5
SRSF6-202ENST00000483871 MYH14Q7Z406 1995 aaKnown RBP18.17■□□□□ 0.5
SRSF6-202ENST00000483871 NBPF26B4DH59 902 aa18.17■□□□□ 0.5
SRSF6-202ENST00000483871 MYL6BP14649 208 aa18.17■□□□□ 0.5
SRSF6-202ENST00000483871 CANXP27824 592 aaKnown RBP18.17■□□□□ 0.5
SRSF6-202ENST00000483871 PROSER3Q2NL68 480 aa18.17■□□□□ 0.5
SRSF6-202ENST00000483871 NBPF14Q5TI25 921 aa18.17■□□□□ 0.5
SRSF6-202ENST00000483871 NBPF10Q6P3W6 841 aaKnown RBP18.17■□□□□ 0.5
SRSF6-202ENST00000483871 NBPF15Q8N660 670 aa18.17■□□□□ 0.5
SRSF6-202ENST00000483871 SSH1Q8WYL5 1049 aa18.17■□□□□ 0.5
SRSF6-202ENST00000483871 ZBTB1Q9Y2K1 713 aa18.17■□□□□ 0.5
SRSF6-202ENST00000483871 TAF1LQ8IZX4 1826 aa18.17■□□□□ 0.5
SRSF6-202ENST00000483871 SOS1Q07889 1333 aaPredicted RBP18.17■□□□□ 0.5
SRSF6-202ENST00000483871 ZNF831Q5JPB2 1677 aa18.16■□□□□ 0.5
SRSF6-202ENST00000483871 CT47B1P0C2W7 299 aaPredicted RBP18.16■□□□□ 0.5
SRSF6-202ENST00000483871 RARSP54136 660 aaKnown RBP18.16■□□□□ 0.5
SRSF6-202ENST00000483871 BCAR3O75815 825 aa18.15■□□□□ 0.5
SRSF6-202ENST00000483871 SLC4A2P04920 1241 aa18.15■□□□□ 0.5
SRSF6-202ENST00000483871 CCDC87Q9NVE4 849 aa18.15■□□□□ 0.5
SRSF6-202ENST00000483871 COL5A3P25940 1745 aaPredicted RBP18.15■□□□□ 0.5
SRSF6-202ENST00000483871 RGPD3A6NKT7 1758 aaPredicted RBP18.15■□□□□ 0.5
SRSF6-202ENST00000483871 RGPD4Q7Z3J3 1758 aa18.15■□□□□ 0.5
SRSF6-202ENST00000483871 AMIGO3Q86WK7 504 aa18.15■□□□□ 0.5
SRSF6-202ENST00000483871 LAMB4A4D0S4 1761 aa18.14■□□□□ 0.49
SRSF6-202ENST00000483871 PHAXQ9H814 394 aaKnown RBP18.14■□□□□ 0.49
SRSF6-202ENST00000483871 DBF4Q9UBU7 674 aaPredicted RBP18.14■□□□□ 0.49
SRSF6-202ENST00000483871 ZNF330Q9Y3S2 320 aaPredicted RBP18.14■□□□□ 0.49
SRSF6-202ENST00000483871 CICQ96RK0 1608 aaPredicted RBP18.13■□□□□ 0.49
SRSF6-202ENST00000483871 ZNF827Q17R98 1081 aa18.13■□□□□ 0.49
SRSF6-202ENST00000483871 RC3H1Q5TC82 1133 aaKnown RBP18.13■□□□□ 0.49
SRSF6-202ENST00000483871 G2E3Q7L622 706 aa18.13■□□□□ 0.49
SRSF6-202ENST00000483871 LRP10Q7Z4F1 713 aa18.13■□□□□ 0.49
SRSF6-202ENST00000483871 STK31Q9BXU1 1019 aa18.13■□□□□ 0.49
SRSF6-202ENST00000483871 DDX21Q9NR30 783 aaKnown RBP eCLIP18.13■□□□□ 0.49
SRSF6-202ENST00000483871 RCAN3Q9UKA8 241 aa18.13■□□□□ 0.49
SRSF6-202ENST00000483871 CNTNAP4Q9C0A0 1308 aa18.13■□□□□ 0.49
SRSF6-202ENST00000483871 GNPATO15228 680 aa18.12■□□□□ 0.49
SRSF6-202ENST00000483871 ALDH1L2Q3SY69 923 aa18.12■□□□□ 0.49
SRSF6-202ENST00000483871 MRPL50Q8N5N7 158 aaKnown RBP18.12■□□□□ 0.49
SRSF6-202ENST00000483871 ZNF428Q96B54 188 aa18.12■□□□□ 0.49
SRSF6-202ENST00000483871 ANO8Q9HCE9 1232 aaPredicted RBP18.12■□□□□ 0.49
SRSF6-202ENST00000483871 SMC4Q9NTJ3 1288 aa18.12■□□□□ 0.49
SRSF6-202ENST00000483871 C4BP0C0L5 1744 aa18.12■□□□□ 0.49
SRSF6-202ENST00000483871 AKT1S1Q96B36 256 aa18.12■□□□□ 0.49
SRSF6-202ENST00000483871 AK7Q96M32 723 aa18.12■□□□□ 0.49
SRSF6-202ENST00000483871 AIMP1Q12904 312 aaKnown RBP18.11■□□□□ 0.49
SRSF6-202ENST00000483871 CHMP4AQ9BY43 222 aa18.11■□□□□ 0.49
SRSF6-202ENST00000483871 RPS6KA4O75676 772 aa18.1■□□□□ 0.49
SRSF6-202ENST00000483871 EIF5P55010 431 aaKnown RBP18.1■□□□□ 0.49
SRSF6-202ENST00000483871 RREB1Q92766 1687 aa18.1■□□□□ 0.49
SRSF6-202ENST00000483871 ERBB4Q15303 1308 aa18.1■□□□□ 0.49
SRSF6-202ENST00000483871 PHF14O94880 888 aa18.09■□□□□ 0.49
SRSF6-202ENST00000483871 IL6STP40189 918 aaPredicted RBP18.09■□□□□ 0.49
SRSF6-202ENST00000483871 COPS6Q7L5N1 327 aa18.09■□□□□ 0.49
SRSF6-202ENST00000483871 ARXQ96QS3 562 aa18.09■□□□□ 0.49
SRSF6-202ENST00000483871 HYPKQ9NX55 129 aa18.09■□□□□ 0.49
SRSF6-202ENST00000483871 RTCBQ9Y3I0 505 aaKnown RBP18.09■□□□□ 0.49
SRSF6-202ENST00000483871 TTLL7Q6ZT98 887 aa18.09■□□□□ 0.49
SRSF6-202ENST00000483871 XAGE3Q8WTP9 111 aa18.09■□□□□ 0.49
SRSF6-202ENST00000483871 TFCP2L1Q9NZI6 479 aa18.09■□□□□ 0.49
SRSF6-202ENST00000483871 NUP188Q5SRE5 1749 aa18.08■□□□□ 0.49
SRSF6-202ENST00000483871 SLC15A2Q16348 729 aa18.08■□□□□ 0.48
SRSF6-202ENST00000483871 NOB1Q9ULX3 412 aaKnown RBP18.08■□□□□ 0.48
SRSF6-202ENST00000483871 TBC1D2BQ9UPU7 963 aa18.08■□□□□ 0.48
SRSF6-202ENST00000483871 FLIIQ13045 1269 aa18.07■□□□□ 0.48
SRSF6-202ENST00000483871 ARHGEF1Q92888 912 aaKnown RBP18.07■□□□□ 0.48
SRSF6-202ENST00000483871 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.06■□□□□ 0.48
SRSF6-202ENST00000483871 FRAT1Q92837 279 aaPredicted RBP18.06■□□□□ 0.48
SRSF6-202ENST00000483871 HMGB2P26583 209 aaKnown RBP18.06■□□□□ 0.48
SRSF6-202ENST00000483871 BRPF1P55201 1214 aaPredicted RBP18.06■□□□□ 0.48
SRSF6-202ENST00000483871 NPM2Q86SE8 214 aaKnown RBP18.06■□□□□ 0.48
SRSF6-202ENST00000483871 STK32BQ9NY57 414 aa18.06■□□□□ 0.48
SRSF6-202ENST00000483871 CACNA1FO60840 1977 aa18.05■□□□□ 0.48
SRSF6-202ENST00000483871 UBR3Q6ZT12 1888 aa18.05■□□□□ 0.48
SRSF6-202ENST00000483871 COL15A1P39059 1388 aa18.05■□□□□ 0.48
SRSF6-202ENST00000483871 PLIN1O60240 522 aa18.05■□□□□ 0.48
SRSF6-202ENST00000483871 CENPBP07199 599 aaPredicted RBP18.05■□□□□ 0.48
SRSF6-202ENST00000483871 TRAPPC3LQ5T215 181 aa18.05■□□□□ 0.48
SRSF6-202ENST00000483871 DZIP3Q86Y13 1208 aaKnown RBP18.05■□□□□ 0.48
SRSF6-202ENST00000483871 SSFA2P28290 1259 aa18.04■□□□□ 0.48
SRSF6-202ENST00000483871 FKBP5Q13451 457 aaPredicted RBP18.04■□□□□ 0.48
SRSF6-202ENST00000483871 TNNQ9UQP3 1299 aa18.04■□□□□ 0.48
SRSF6-202ENST00000483871 COL23A1Q86Y22 540 aaPredicted RBP18.03■□□□□ 0.48
SRSF6-202ENST00000483871 ZBTB3Q9H5J0 574 aa18.03■□□□□ 0.48
SRSF6-202ENST00000483871 SRP68Q9UHB9 627 aaKnown RBP18.03■□□□□ 0.48
SRSF6-202ENST00000483871 SUPT16HQ9Y5B9 1047 aaKnown RBP18.03■□□□□ 0.48
SRSF6-202ENST00000483871 PNPLA7Q6ZV29 1317 aa18.03■□□□□ 0.48
SRSF6-202ENST00000483871 PI4KAP2A4QPH2 592 aa18.03■□□□□ 0.48
SRSF6-202ENST00000483871 F6X3S4 739 aa18.03■□□□□ 0.48
SRSF6-202ENST00000483871 ANKRD13DQ6ZTN6 518 aa18.03■□□□□ 0.48
SRSF6-202ENST00000483871 PI4KAP1Q8N8J0 262 aa18.03■□□□□ 0.48
SRSF6-202ENST00000483871 TUBGCP6Q96RT7 1819 aa18.02■□□□□ 0.48
SRSF6-202ENST00000483871 SOCS7O14512 581 aa18.02■□□□□ 0.47
SRSF6-202ENST00000483871 RFC4P35249 363 aa18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms